RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 ALDH1L1O75891 902 aa15.03■□□□□ -0
LINC00477-201ENST00000483544 MSNP26038 577 aaKnown RBP15.03■□□□□ -0
LINC00477-201ENST00000483544 SSFA2P28290 1259 aa15.03■□□□□ -0
LINC00477-201ENST00000483544 SASS6Q6UVJ0 657 aa15.03■□□□□ -0
LINC00477-201ENST00000483544 CEP120Q8N960 986 aa15.03■□□□□ -0
LINC00477-201ENST00000483544 DNAAF4Q8WXU2 420 aa15.03■□□□□ -0
LINC00477-201ENST00000483544 GZF1Q9H116 711 aaPredicted RBP15.03■□□□□ -0
LINC00477-201ENST00000483544 NPHP4O75161 1426 aaPredicted RBP15.03■□□□□ -0
LINC00477-201ENST00000483544 CRYBG1Q9Y4K1 1723 aa15.02■□□□□ -0
LINC00477-201ENST00000483544 USP42Q9H9J4 1324 aaKnown RBP15.02■□□□□ -0
LINC00477-201ENST00000483544 NBPF6Q5VWK0 638 aa15.02□□□□□ -0.01
LINC00477-201ENST00000483544 NBPF4Q96M43 638 aa15.02□□□□□ -0.01
LINC00477-201ENST00000483544 PHF14O94880 888 aa15.01□□□□□ -0.01
LINC00477-201ENST00000483544 MCM5P33992 734 aa15.01□□□□□ -0.01
LINC00477-201ENST00000483544 MTX1Q13505 466 aa15.01□□□□□ -0.01
LINC00477-201ENST00000483544 CUL4AQ13619 759 aa15.01□□□□□ -0.01
LINC00477-201ENST00000483544 C1orf141Q5JVX7 400 aa15.01□□□□□ -0.01
LINC00477-201ENST00000483544 ZNF530Q6P9A1 599 aaPredicted RBP15.01□□□□□ -0.01
LINC00477-201ENST00000483544 ARHGEF25Q86VW2 580 aa15.01□□□□□ -0.01
LINC00477-201ENST00000483544 DBF4Q9UBU7 674 aaPredicted RBP15.01□□□□□ -0.01
LINC00477-201ENST00000483544 HEG1Q9ULI3 1381 aa15.01□□□□□ -0.01
LINC00477-201ENST00000483544 ESCO1Q5FWF5 840 aa15□□□□□ -0.01
LINC00477-201ENST00000483544 BEND3Q5T5X7 828 aa15□□□□□ -0.01
LINC00477-201ENST00000483544 TTC41PQ6P2S7 1318 aa15□□□□□ -0.01
LINC00477-201ENST00000483544 BTBD11A6QL63 1104 aa15□□□□□ -0.01
LINC00477-201ENST00000483544 RNMTO43148 476 aaKnown RBP15□□□□□ -0.01
LINC00477-201ENST00000483544 TICAM2Q86XR7 235 aa15□□□□□ -0.01
LINC00477-201ENST00000483544 ERC1Q8IUD2 1116 aa15□□□□□ -0.01
LINC00477-201ENST00000483544 TRIM6-TRIM34B2RNG4 842 aa14.99□□□□□ -0.01
LINC00477-201ENST00000483544 PPP1R42Q7Z4L9 355 aa14.99□□□□□ -0.01
LINC00477-201ENST00000483544 RHPN1Q8TCX5 695 aa14.99□□□□□ -0.01
LINC00477-201ENST00000483544 FOXD4L1Q9NU39 408 aa14.99□□□□□ -0.01
LINC00477-201ENST00000483544 R3HCC1Q9Y3T6 440 aaKnown RBP14.99□□□□□ -0.01
LINC00477-201ENST00000483544 DDX49Q9Y6V7 483 aaKnown RBP14.99□□□□□ -0.01
LINC00477-201ENST00000483544 CCDC66A2RUB6 948 aa14.98□□□□□ -0.01
LINC00477-201ENST00000483544 GCP02774 474 aa14.98□□□□□ -0.01
LINC00477-201ENST00000483544 ZNF445P59923 1031 aa14.98□□□□□ -0.01
LINC00477-201ENST00000483544 CNTROBQ8N137 903 aa14.98□□□□□ -0.01
LINC00477-201ENST00000483544 PHAXQ9H814 394 aaKnown RBP14.98□□□□□ -0.01
LINC00477-201ENST00000483544 LTBP4Q8N2S1 1624 aa14.98□□□□□ -0.01
LINC00477-201ENST00000483544 SURF6O75683 361 aaKnown RBP14.97□□□□□ -0.01
LINC00477-201ENST00000483544 APPP05067 770 aa14.97□□□□□ -0.01
LINC00477-201ENST00000483544 NEK4P51957 841 aa14.97□□□□□ -0.01
LINC00477-201ENST00000483544 USHBP1Q8N6Y0 703 aa14.97□□□□□ -0.01
LINC00477-201ENST00000483544 NECTIN2Q92692 538 aa14.97□□□□□ -0.01
LINC00477-201ENST00000483544 RILPL2Q969X0 211 aa14.97□□□□□ -0.01
LINC00477-201ENST00000483544 EFCC1Q9HA90 598 aa14.97□□□□□ -0.01
LINC00477-201ENST00000483544 HYPKQ9NX55 129 aa14.97□□□□□ -0.01
LINC00477-201ENST00000483544 GPATCH3Q96I76 525 aa14.97□□□□□ -0.01
LINC00477-201ENST00000483544 LGR6Q9HBX8 967 aa14.97□□□□□ -0.01
LINC00477-201ENST00000483544 CHPF2Q9P2E5 772 aa14.97□□□□□ -0.01
LINC00477-201ENST00000483544 CGNQ9P2M7 1197 aaKnown RBP14.97□□□□□ -0.01
LINC00477-201ENST00000483544 ALS2Q96Q42 1657 aa14.97□□□□□ -0.01
LINC00477-201ENST00000483544 SCN11AQ9UI33 1791 aa14.96□□□□□ -0.01
LINC00477-201ENST00000483544 SRGAP3O43295 1099 aa14.96□□□□□ -0.01
LINC00477-201ENST00000483544 GLRX3O76003 335 aaKnown RBP14.96□□□□□ -0.01
LINC00477-201ENST00000483544 DDX58O95786 925 aaKnown RBP14.96□□□□□ -0.01
LINC00477-201ENST00000483544 EIF2S2P20042 333 aaKnown RBP14.96□□□□□ -0.01
LINC00477-201ENST00000483544 RUFY2Q8WXA3 655 aa14.96□□□□□ -0.01
LINC00477-201ENST00000483544 TMX3Q96JJ7 454 aa14.96□□□□□ -0.01
LINC00477-201ENST00000483544 ANO2Q9NQ90 1003 aa14.96□□□□□ -0.01
LINC00477-201ENST00000483544 LMBRD1Q9NUN5 540 aa14.96□□□□□ -0.01
LINC00477-201ENST00000483544 ADCY9O60503 1353 aa14.95□□□□□ -0.02
LINC00477-201ENST00000483544 PI4KAP2A4QPH2 592 aa14.95□□□□□ -0.02
LINC00477-201ENST00000483544 MBD3O95983 291 aa14.95□□□□□ -0.02
LINC00477-201ENST00000483544 HSPA4P34932 840 aa14.95□□□□□ -0.02
LINC00477-201ENST00000483544 KSR2Q6VAB6 950 aa14.95□□□□□ -0.02
LINC00477-201ENST00000483544 PI4KAP1Q8N8J0 262 aa14.95□□□□□ -0.02
LINC00477-201ENST00000483544 PI4K2BQ8TCG2 481 aa14.95□□□□□ -0.02
LINC00477-201ENST00000483544 STRCQ7RTU9 1775 aa14.95□□□□□ -0.02
LINC00477-201ENST00000483544 TULP2O00295 520 aa14.95□□□□□ -0.02
LINC00477-201ENST00000483544 GIGYF1O75420 1035 aaPredicted RBP14.95□□□□□ -0.02
LINC00477-201ENST00000483544 GABPB1Q06547 395 aaPredicted RBP14.95□□□□□ -0.02
LINC00477-201ENST00000483544 MCTP1Q6DN14 999 aa14.95□□□□□ -0.02
LINC00477-201ENST00000483544 ANKRD24Q8TF21 1146 aa14.95□□□□□ -0.02
LINC00477-201ENST00000483544 UTYO14607 1347 aa14.94□□□□□ -0.02
LINC00477-201ENST00000483544 SGSM2O43147 1006 aa14.94□□□□□ -0.02
LINC00477-201ENST00000483544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.94□□□□□ -0.02
LINC00477-201ENST00000483544 NOL7Q9UMY1 257 aaKnown RBP14.94□□□□□ -0.02
LINC00477-201ENST00000483544 RAD50Q92878 1312 aa14.94□□□□□ -0.02
LINC00477-201ENST00000483544 HIP1O00291 1037 aa14.93□□□□□ -0.02
LINC00477-201ENST00000483544 BRD1O95696 1058 aa14.93□□□□□ -0.02
LINC00477-201ENST00000483544 CLASRPQ8N2M8 674 aaKnown RBP14.93□□□□□ -0.02
LINC00477-201ENST00000483544 DCCP43146 1447 aa14.93□□□□□ -0.02
LINC00477-201ENST00000483544 GTF2F1P35269 517 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC00477-201ENST00000483544 LINS1Q8NG48 757 aa14.92□□□□□ -0.02
LINC00477-201ENST00000483544 DDX21Q9NR30 783 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC00477-201ENST00000483544 KIF3AQ9Y496 699 aa14.92□□□□□ -0.02
LINC00477-201ENST00000483544 RGPD5Q99666 1765 aa14.92□□□□□ -0.02
LINC00477-201ENST00000483544 C1orf167Q5SNV9 1468 aa14.92□□□□□ -0.02
LINC00477-201ENST00000483544 NBPF7P0C2Y1 421 aaPredicted RBP14.92□□□□□ -0.02
LINC00477-201ENST00000483544 KRT28Q7Z3Y7 464 aa14.92□□□□□ -0.02
LINC00477-201ENST00000483544 ZGPATQ8N5A5 531 aaKnown RBP14.92□□□□□ -0.02
LINC00477-201ENST00000483544 C9orf78Q9NZ63 289 aaPredicted RBP14.92□□□□□ -0.02
LINC00477-201ENST00000483544 PXDNQ92626 1479 aa14.91□□□□□ -0.02
LINC00477-201ENST00000483544 GAS2L3Q86XJ1 694 aa14.91□□□□□ -0.02
LINC00477-201ENST00000483544 LRRC59Q96AG4 307 aaKnown RBP14.91□□□□□ -0.02
LINC00477-201ENST00000483544 TIGD1Q96MW7 591 aa14.91□□□□□ -0.02
LINC00477-201ENST00000483544 IL1RAPL2Q9NP60 686 aa14.91□□□□□ -0.02
LINC00477-201ENST00000483544 ZDHHC9Q9Y397 364 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms