RNA–Protein interactions for RNA: ENST00000483474.1

RTCA-204, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 3

Gene RTCA, Length 683 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-204ENST00000483474 TRIM35Q9UPQ4 493 aa22.7■■□□□ 1.22
RTCA-204ENST00000483474 MYL6BP14649 208 aa22.69■■□□□ 1.22
RTCA-204ENST00000483474 NBPF5PQ86XG9 351 aaPredicted RBP22.69■■□□□ 1.22
RTCA-204ENST00000483474 BRIP1Q9BX63 1249 aa22.69■■□□□ 1.22
RTCA-204ENST00000483474 CHL1O00533 1208 aa22.68■■□□□ 1.22
RTCA-204ENST00000483474 C2CD5Q86YS7 1000 aa22.68■■□□□ 1.22
RTCA-204ENST00000483474 MRS2Q9HD23 443 aa22.68■■□□□ 1.22
RTCA-204ENST00000483474 NIP7Q9Y221 180 aaKnown RBP eCLIP22.68■■□□□ 1.22
RTCA-204ENST00000483474 NUP98P52948 1817 aa22.67■■□□□ 1.22
RTCA-204ENST00000483474 ERVV-1B6SEH8 477 aa22.67■■□□□ 1.22
RTCA-204ENST00000483474 TPTE2Q6XPS3 522 aa22.67■■□□□ 1.22
RTCA-204ENST00000483474 GTF2E1P29083 439 aaPredicted RBP22.66■■□□□ 1.22
RTCA-204ENST00000483474 PRR5LQ6MZQ0 368 aa22.66■■□□□ 1.22
RTCA-204ENST00000483474 TTLL6Q8N841 843 aa22.66■■□□□ 1.22
RTCA-204ENST00000483474 CFAP44Q96MT7 982 aa22.66■■□□□ 1.22
RTCA-204ENST00000483474 DLEC1Q9Y238 1755 aa22.66■■□□□ 1.22
RTCA-204ENST00000483474 MAP3K15Q6ZN16 1313 aa22.64■■□□□ 1.22
RTCA-204ENST00000483474 GNAI1P63096 354 aa22.64■■□□□ 1.21
RTCA-204ENST00000483474 ZNF622Q969S3 477 aaKnown RBP eCLIP22.64■■□□□ 1.21
RTCA-204ENST00000483474 ANKRD31Q8N7Z5 1873 aa22.63■■□□□ 1.21
RTCA-204ENST00000483474 NYXQ9GZU5 481 aa22.63■■□□□ 1.21
RTCA-204ENST00000483474 FAM177BA6PVY3 158 aa22.61■■□□□ 1.21
RTCA-204ENST00000483474 HOXB7P09629 217 aa22.61■■□□□ 1.21
RTCA-204ENST00000483474 HLFQ16534 295 aa22.61■■□□□ 1.21
RTCA-204ENST00000483474 CCDC184Q52MB2 194 aa22.61■■□□□ 1.21
RTCA-204ENST00000483474 CCDC24Q8N4L8 307 aa22.61■■□□□ 1.21
RTCA-204ENST00000483474 NECTIN2Q92692 538 aa22.61■■□□□ 1.21
RTCA-204ENST00000483474 CHMP4AQ9BY43 222 aa22.61■■□□□ 1.21
RTCA-204ENST00000483474 GPBP1L1Q9HC44 474 aaPredicted RBP22.61■■□□□ 1.21
RTCA-204ENST00000483474 IFT57Q9NWB7 429 aa22.61■■□□□ 1.21
RTCA-204ENST00000483474 TTLL7Q6ZT98 887 aa22.6■■□□□ 1.21
RTCA-204ENST00000483474 ZBTB3Q9H5J0 574 aa22.6■■□□□ 1.21
RTCA-204ENST00000483474 ATP10DQ9P241 1426 aa22.59■■□□□ 1.21
RTCA-204ENST00000483474 CNKSR1Q969H4 720 aa22.59■■□□□ 1.21
RTCA-204ENST00000483474 HDGFL1Q5TGJ6 251 aa22.58■■□□□ 1.21
RTCA-204ENST00000483474 MASTLQ96GX5 879 aa22.58■■□□□ 1.21
RTCA-204ENST00000483474 DDX21Q9NR30 783 aaKnown RBP eCLIP22.58■■□□□ 1.21
RTCA-204ENST00000483474 MBIPQ9NS73 344 aa22.58■■□□□ 1.21
RTCA-204ENST00000483474 STYK1Q6J9G0 422 aa22.57■■□□□ 1.2
RTCA-204ENST00000483474 GIGYF2Q6Y7W6 1299 aaKnown RBP22.57■■□□□ 1.2
RTCA-204ENST00000483474 CACNA1SQ13698 1873 aa22.57■■□□□ 1.2
RTCA-204ENST00000483474 SBF1O95248 1867 aa22.56■■□□□ 1.2
RTCA-204ENST00000483474 AIMP1Q12904 312 aaKnown RBP22.56■■□□□ 1.2
RTCA-204ENST00000483474 HSP90AB3PQ58FF7 597 aa22.56■■□□□ 1.2
RTCA-204ENST00000483474 DUSP27Q5VZP5 1158 aa22.56■■□□□ 1.2
RTCA-204ENST00000483474 PPP1R42Q7Z4L9 355 aa22.56■■□□□ 1.2
RTCA-204ENST00000483474 ZNF526Q8TF50 670 aaPredicted RBP22.56■■□□□ 1.2
RTCA-204ENST00000483474 DBF4Q9UBU7 674 aaPredicted RBP22.56■■□□□ 1.2
RTCA-204ENST00000483474 ZNF853P0CG23 659 aa22.55■■□□□ 1.2
RTCA-204ENST00000483474 SRGNP10124 158 aa22.55■■□□□ 1.2
RTCA-204ENST00000483474 GPTP24298 496 aa22.55■■□□□ 1.2
RTCA-204ENST00000483474 PDIA6Q15084 440 aa22.55■■□□□ 1.2
RTCA-204ENST00000483474 KRT24Q2M2I5 525 aa22.55■■□□□ 1.2
RTCA-204ENST00000483474 PARP10Q53GL7 1025 aa22.55■■□□□ 1.2
RTCA-204ENST00000483474 C9orf131Q5VYM1 1079 aa22.55■■□□□ 1.2
RTCA-204ENST00000483474 COPS6Q7L5N1 327 aa22.55■■□□□ 1.2
RTCA-204ENST00000483474 CCDC88AQ3V6T2 1871 aa22.55■■□□□ 1.2
RTCA-204ENST00000483474 ADCY9O60503 1353 aa22.54■■□□□ 1.2
RTCA-204ENST00000483474 ANXA1P04083 346 aa22.54■■□□□ 1.2
RTCA-204ENST00000483474 NPR1P16066 1061 aa22.54■■□□□ 1.2
RTCA-204ENST00000483474 CCDC27Q2M243 656 aa22.54■■□□□ 1.2
RTCA-204ENST00000483474 SOGA3Q5TF21 947 aa22.54■■□□□ 1.2
RTCA-204ENST00000483474 RNF181Q9P0P0 153 aa22.54■■□□□ 1.2
RTCA-204ENST00000483474 PROSER3Q2NL68 480 aa22.53■■□□□ 1.2
RTCA-204ENST00000483474 XAGE3Q8WTP9 111 aa22.53■■□□□ 1.2
RTCA-204ENST00000483474 HYPKQ9NX55 129 aa22.53■■□□□ 1.2
RTCA-204ENST00000483474 CHPF2Q9P2E5 772 aa22.53■■□□□ 1.2
RTCA-204ENST00000483474 COL11A2P13942 1736 aaPredicted RBP22.53■■□□□ 1.2
RTCA-204ENST00000483474 ALDH1B1P30837 517 aa22.52■■□□□ 1.2
RTCA-204ENST00000483474 NCBP3Q53F19 620 aaKnown RBP22.52■■□□□ 1.2
RTCA-204ENST00000483474 ZNF34Q8IZ26 560 aa22.52■■□□□ 1.2
RTCA-204ENST00000483474 ZNF219Q9P2Y4 722 aaPredicted RBP22.52■■□□□ 1.2
RTCA-204ENST00000483474 C21orf2O43822 256 aa22.51■■□□□ 1.19
RTCA-204ENST00000483474 IBTKQ9P2D0 1353 aaPredicted RBP22.5■■□□□ 1.19
RTCA-204ENST00000483474 ANKRD36CQ5JPF3 1778 aa22.5■■□□□ 1.19
RTCA-204ENST00000483474 ARFGEF2Q9Y6D5 1785 aa22.5■■□□□ 1.19
RTCA-204ENST00000483474 LMNB1P20700 586 aa22.5■■□□□ 1.19
RTCA-204ENST00000483474 PRPF40BQ6NWY9 871 aaKnown RBP22.5■■□□□ 1.19
RTCA-204ENST00000483474 LRP10Q7Z4F1 713 aa22.5■■□□□ 1.19
RTCA-204ENST00000483474 WWC1Q8IX03 1113 aa22.5■■□□□ 1.19
RTCA-204ENST00000483474 SLX4Q8IY92 1834 aa22.5■■□□□ 1.19
RTCA-204ENST00000483474 KLRG2A4D1S0 409 aaPredicted RBP22.49■■□□□ 1.19
RTCA-204ENST00000483474 ELL2O00472 640 aaPredicted RBP22.49■■□□□ 1.19
RTCA-204ENST00000483474 SUSD4Q5VX71 490 aa22.49■■□□□ 1.19
RTCA-204ENST00000483474 NUTM1Q86Y26 1132 aa22.49■■□□□ 1.19
RTCA-204ENST00000483474 FAM9BQ8IZU0 186 aa22.49■■□□□ 1.19
RTCA-204ENST00000483474 RPGRQ92834 1020 aaKnown RBP22.49■■□□□ 1.19
RTCA-204ENST00000483474 UTP14AQ9BVJ6 771 aaKnown RBP22.49■■□□□ 1.19
RTCA-204ENST00000483474 C1QTNF8P60827 252 aa22.48■■□□□ 1.19
RTCA-204ENST00000483474 ERFEQ4G0M1 354 aa22.48■■□□□ 1.19
RTCA-204ENST00000483474 ANKRD13DQ6ZTN6 518 aa22.48■■□□□ 1.19
RTCA-204ENST00000483474 PLBD2Q8NHP8 589 aa22.48■■□□□ 1.19
RTCA-204ENST00000483474 KDM2BQ8NHM5 1336 aa22.48■■□□□ 1.19
RTCA-204ENST00000483474 RASSF7Q02833 373 aa22.47■■□□□ 1.19
RTCA-204ENST00000483474 TCIRG1Q13488 830 aa22.47■■□□□ 1.19
RTCA-204ENST00000483474 CCDC30Q5VVM6 783 aa22.47■■□□□ 1.19
RTCA-204ENST00000483474 RNF123Q5XPI4 1314 aa22.47■■□□□ 1.19
RTCA-204ENST00000483474 UBN2Q6ZU65 1347 aa22.47■■□□□ 1.19
RTCA-204ENST00000483474 FER1L6Q2WGJ9 1857 aa22.47■■□□□ 1.19
RTCA-204ENST00000483474 NLRP3Q96P20 1036 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms