RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 KIF6Q6ZMV9 814 aa18.11■□□□□ 0.49
VARS-225ENST00000482996 C2CD5Q86YS7 1000 aa18.11■□□□□ 0.49
VARS-225ENST00000482996 MRS2Q9HD23 443 aa18.11■□□□□ 0.49
VARS-225ENST00000482996 PDE6BP35913 854 aa18.1■□□□□ 0.49
VARS-225ENST00000482996 ARHGAP27Q6ZUM4 889 aa18.1■□□□□ 0.49
VARS-225ENST00000482996 NBPF5PQ86XG9 351 aaPredicted RBP18.1■□□□□ 0.49
VARS-225ENST00000482996 CFAP44Q96MT7 982 aa18.1■□□□□ 0.49
VARS-225ENST00000482996 BRIP1Q9BX63 1249 aa18.1■□□□□ 0.49
VARS-225ENST00000482996 ERVV-1B6SEH8 477 aa18.09■□□□□ 0.49
VARS-225ENST00000482996 NIP7Q9Y221 180 aaKnown RBP eCLIP18.09■□□□□ 0.49
VARS-225ENST00000482996 BRCA1P38398 1863 aaKnown RBP18.08■□□□□ 0.49
VARS-225ENST00000482996 MAP3K15Q6ZN16 1313 aa18.08■□□□□ 0.49
VARS-225ENST00000482996 HLFQ16534 295 aa18.07■□□□□ 0.48
VARS-225ENST00000482996 TTLL7Q6ZT98 887 aa18.07■□□□□ 0.48
VARS-225ENST00000482996 CCDC24Q8N4L8 307 aa18.07■□□□□ 0.48
VARS-225ENST00000482996 TTLL6Q8N841 843 aa18.07■□□□□ 0.48
VARS-225ENST00000482996 HOXB7P09629 217 aa18.06■□□□□ 0.48
VARS-225ENST00000482996 GNAI1P63096 354 aa18.06■□□□□ 0.48
VARS-225ENST00000482996 TPTE2Q6XPS3 522 aa18.06■□□□□ 0.48
VARS-225ENST00000482996 IFT57Q9NWB7 429 aa18.06■□□□□ 0.48
VARS-225ENST00000482996 KRT24Q2M2I5 525 aa18.05■□□□□ 0.48
VARS-225ENST00000482996 NECTIN2Q92692 538 aa18.05■□□□□ 0.48
VARS-225ENST00000482996 ZNF622Q969S3 477 aaKnown RBP eCLIP18.05■□□□□ 0.48
VARS-225ENST00000482996 ZBTB3Q9H5J0 574 aa18.05■□□□□ 0.48
VARS-225ENST00000482996 MBIPQ9NS73 344 aa18.05■□□□□ 0.48
VARS-225ENST00000482996 ARFGEF1Q9Y6D6 1849 aa18.05■□□□□ 0.48
VARS-225ENST00000482996 FAM177BA6PVY3 158 aa18.04■□□□□ 0.48
VARS-225ENST00000482996 ZNF853P0CG23 659 aa18.04■□□□□ 0.48
VARS-225ENST00000482996 GTF2E1P29083 439 aaPredicted RBP18.04■□□□□ 0.48
VARS-225ENST00000482996 PDIA6Q15084 440 aa18.04■□□□□ 0.48
VARS-225ENST00000482996 ATP10DQ9P241 1426 aa18.04■□□□□ 0.48
VARS-225ENST00000482996 ANXA1P04083 346 aa18.03■□□□□ 0.48
VARS-225ENST00000482996 PROSER3Q2NL68 480 aa18.03■□□□□ 0.48
VARS-225ENST00000482996 HDGFL1Q5TGJ6 251 aa18.03■□□□□ 0.48
VARS-225ENST00000482996 NYXQ9GZU5 481 aa18.03■□□□□ 0.48
VARS-225ENST00000482996 DDX21Q9NR30 783 aaKnown RBP eCLIP18.03■□□□□ 0.48
VARS-225ENST00000482996 ADCY9O60503 1353 aa18.03■□□□□ 0.48
VARS-225ENST00000482996 DUSP27Q5VZP5 1158 aa18.02■□□□□ 0.48
VARS-225ENST00000482996 GIGYF2Q6Y7W6 1299 aaKnown RBP18.02■□□□□ 0.48
VARS-225ENST00000482996 LRP10Q7Z4F1 713 aa18.02■□□□□ 0.48
VARS-225ENST00000482996 ANKRD31Q8N7Z5 1873 aa18.02■□□□□ 0.48
VARS-225ENST00000482996 DLEC1Q9Y238 1755 aa18.02■□□□□ 0.47
VARS-225ENST00000482996 GPTP24298 496 aa18.01■□□□□ 0.47
VARS-225ENST00000482996 CCDC27Q2M243 656 aa18.01■□□□□ 0.47
VARS-225ENST00000482996 STYK1Q6J9G0 422 aa18.01■□□□□ 0.47
VARS-225ENST00000482996 COPS6Q7L5N1 327 aa18.01■□□□□ 0.47
VARS-225ENST00000482996 XAGE3Q8WTP9 111 aa18.01■□□□□ 0.47
VARS-225ENST00000482996 CNKSR1Q969H4 720 aa18.01■□□□□ 0.47
VARS-225ENST00000482996 MASTLQ96GX5 879 aa18.01■□□□□ 0.47
VARS-225ENST00000482996 SRGNP10124 158 aa18■□□□□ 0.47
VARS-225ENST00000482996 AIMP1Q12904 312 aaKnown RBP18■□□□□ 0.47
VARS-225ENST00000482996 C9orf131Q5VYM1 1079 aa18■□□□□ 0.47
VARS-225ENST00000482996 GPBP1L1Q9HC44 474 aaPredicted RBP18■□□□□ 0.47
VARS-225ENST00000482996 CHPF2Q9P2E5 772 aa18■□□□□ 0.47
VARS-225ENST00000482996 DBF4Q9UBU7 674 aaPredicted RBP18■□□□□ 0.47
VARS-225ENST00000482996 NCBP3Q53F19 620 aaKnown RBP17.99■□□□□ 0.47
VARS-225ENST00000482996 PARP10Q53GL7 1025 aa17.99■□□□□ 0.47
VARS-225ENST00000482996 HSP90AB3PQ58FF7 597 aa17.99■□□□□ 0.47
VARS-225ENST00000482996 ZNF34Q8IZ26 560 aa17.99■□□□□ 0.47
VARS-225ENST00000482996 CHMP4AQ9BY43 222 aa17.99■□□□□ 0.47
VARS-225ENST00000482996 NUP98P52948 1817 aa17.99■□□□□ 0.47
VARS-225ENST00000482996 IBTKQ9P2D0 1353 aaPredicted RBP17.99■□□□□ 0.47
VARS-225ENST00000482996 KLRG2A4D1S0 409 aaPredicted RBP17.98■□□□□ 0.47
VARS-225ENST00000482996 NPR1P16066 1061 aa17.98■□□□□ 0.47
VARS-225ENST00000482996 PPP1R42Q7Z4L9 355 aa17.98■□□□□ 0.47
VARS-225ENST00000482996 ZNF526Q8TF50 670 aaPredicted RBP17.98■□□□□ 0.47
VARS-225ENST00000482996 SENP3-EIF4A1A0A087X0R7 540 aa17.97■□□□□ 0.47
VARS-225ENST00000482996 NUTM1Q86Y26 1132 aa17.97■□□□□ 0.47
VARS-225ENST00000482996 WWC1Q8IX03 1113 aa17.97■□□□□ 0.47
VARS-225ENST00000482996 HYPKQ9NX55 129 aa17.97■□□□□ 0.47
VARS-225ENST00000482996 RNF181Q9P0P0 153 aa17.97■□□□□ 0.47
VARS-225ENST00000482996 COL11A2P13942 1736 aaPredicted RBP17.97■□□□□ 0.47
VARS-225ENST00000482996 UBN2Q6ZU65 1347 aa17.97■□□□□ 0.47
VARS-225ENST00000482996 ELL2O00472 640 aaPredicted RBP17.96■□□□□ 0.47
VARS-225ENST00000482996 C21orf2O43822 256 aa17.96■□□□□ 0.47
VARS-225ENST00000482996 ERFEQ4G0M1 354 aa17.96■□□□□ 0.47
VARS-225ENST00000482996 SUSD4Q5VX71 490 aa17.96■□□□□ 0.47
VARS-225ENST00000482996 PRPF40BQ6NWY9 871 aaKnown RBP17.96■□□□□ 0.47
VARS-225ENST00000482996 ZNF219Q9P2Y4 722 aaPredicted RBP17.96■□□□□ 0.47
VARS-225ENST00000482996 LMNB1P20700 586 aa17.95■□□□□ 0.46
VARS-225ENST00000482996 RASSF7Q02833 373 aa17.95■□□□□ 0.46
VARS-225ENST00000482996 SOGA3Q5TF21 947 aa17.95■□□□□ 0.46
VARS-225ENST00000482996 FAM9BQ8IZU0 186 aa17.95■□□□□ 0.46
VARS-225ENST00000482996 IL16Q14005 1332 aa17.95■□□□□ 0.46
VARS-225ENST00000482996 ABCC12Q96J65 1359 aa17.94■□□□□ 0.46
VARS-225ENST00000482996 NTSR2O95665 410 aa17.94■□□□□ 0.46
VARS-225ENST00000482996 ALDH1B1P30837 517 aa17.94■□□□□ 0.46
VARS-225ENST00000482996 C8orf58Q8NAV2 365 aa17.94■□□□□ 0.46
VARS-225ENST00000482996 PLBD2Q8NHP8 589 aa17.94■□□□□ 0.46
VARS-225ENST00000482996 UTP14AQ9BVJ6 771 aaKnown RBP17.94■□□□□ 0.46
VARS-225ENST00000482996 RIC1Q4ADV7 1423 aa17.93■□□□□ 0.46
VARS-225ENST00000482996 TCIRG1Q13488 830 aa17.93■□□□□ 0.46
VARS-225ENST00000482996 ANKRD13DQ6ZTN6 518 aa17.93■□□□□ 0.46
VARS-225ENST00000482996 TSR2Q969E8 191 aaKnown RBP17.93■□□□□ 0.46
VARS-225ENST00000482996 SALL2Q9Y467 1007 aaPredicted RBP17.93■□□□□ 0.46
VARS-225ENST00000482996 RNF123Q5XPI4 1314 aa17.93■□□□□ 0.46
VARS-225ENST00000482996 NFKBIEO00221 500 aa17.92■□□□□ 0.46
VARS-225ENST00000482996 C1QTNF8P60827 252 aa17.92■□□□□ 0.46
VARS-225ENST00000482996 CRY2Q49AN0 593 aa17.92■□□□□ 0.46
VARS-225ENST00000482996 CCDC30Q5VVM6 783 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms