RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 C9orf131Q5VYM1 1079 aa17.3■□□□□ 0.36
ZKSCAN1-204ENST00000482979 DUSP27Q5VZP5 1158 aa17.3■□□□□ 0.36
ZKSCAN1-204ENST00000482979 BTBD11A6QL63 1104 aa17.3■□□□□ 0.36
ZKSCAN1-204ENST00000482979 STARD3NLO95772 234 aa17.3■□□□□ 0.36
ZKSCAN1-204ENST00000482979 SERPINB2P05120 415 aa17.3■□□□□ 0.36
ZKSCAN1-204ENST00000482979 DLEC1Q9Y238 1755 aa17.3■□□□□ 0.36
ZKSCAN1-204ENST00000482979 SCN7AQ01118 1682 aa17.29■□□□□ 0.36
ZKSCAN1-204ENST00000482979 CHL1O00533 1208 aa17.29■□□□□ 0.36
ZKSCAN1-204ENST00000482979 TRMT2AQ8IZ69 625 aaKnown RBP17.29■□□□□ 0.36
ZKSCAN1-204ENST00000482979 NMRK2Q9NPI5 230 aa17.29■□□□□ 0.36
ZKSCAN1-204ENST00000482979 SBF1O95248 1867 aa17.28■□□□□ 0.36
ZKSCAN1-204ENST00000482979 BICDL1Q6ZP65 573 aa17.28■□□□□ 0.36
ZKSCAN1-204ENST00000482979 TBC1D9BQ66K14 1250 aa17.27■□□□□ 0.35
ZKSCAN1-204ENST00000482979 ANKRD31Q8N7Z5 1873 aa17.26■□□□□ 0.35
ZKSCAN1-204ENST00000482979 A1BGP04217 495 aa17.26■□□□□ 0.35
ZKSCAN1-204ENST00000482979 EXOSC9Q06265 439 aaKnown RBP17.26■□□□□ 0.35
ZKSCAN1-204ENST00000482979 FMNL2Q96PY5 1086 aa17.26■□□□□ 0.35
ZKSCAN1-204ENST00000482979 TEX13AQ9BXU3 409 aaPredicted RBP17.26■□□□□ 0.35
ZKSCAN1-204ENST00000482979 BABAM1Q9NWV8 329 aa17.26■□□□□ 0.35
ZKSCAN1-204ENST00000482979 TBC1D2BQ9UPU7 963 aa17.26■□□□□ 0.35
ZKSCAN1-204ENST00000482979 A0A087WZG4 1122 aa17.25■□□□□ 0.35
ZKSCAN1-204ENST00000482979 IL6STP40189 918 aaPredicted RBP17.25■□□□□ 0.35
ZKSCAN1-204ENST00000482979 RASSF7Q02833 373 aa17.25■□□□□ 0.35
ZKSCAN1-204ENST00000482979 RNF181Q9P0P0 153 aa17.25■□□□□ 0.35
ZKSCAN1-204ENST00000482979 ZNF330Q9Y3S2 320 aaPredicted RBP17.25■□□□□ 0.35
ZKSCAN1-204ENST00000482979 PRAMEF22A3QJZ6 481 aa17.24■□□□□ 0.35
ZKSCAN1-204ENST00000482979 PRELPP51888 382 aa17.24■□□□□ 0.35
ZKSCAN1-204ENST00000482979 KRT24Q2M2I5 525 aa17.24■□□□□ 0.35
ZKSCAN1-204ENST00000482979 C2CD5Q86YS7 1000 aa17.24■□□□□ 0.35
ZKSCAN1-204ENST00000482979 TOMM70O94826 608 aa17.23■□□□□ 0.35
ZKSCAN1-204ENST00000482979 USP16Q9Y5T5 823 aa17.23■□□□□ 0.35
ZKSCAN1-204ENST00000482979 BCORQ6W2J9 1755 aa17.23■□□□□ 0.35
ZKSCAN1-204ENST00000482979 COL11A2P13942 1736 aaPredicted RBP17.23■□□□□ 0.35
ZKSCAN1-204ENST00000482979 ELL2O00472 640 aaPredicted RBP17.22■□□□□ 0.35
ZKSCAN1-204ENST00000482979 CAMTA2O94983 1202 aa17.22■□□□□ 0.35
ZKSCAN1-204ENST00000482979 PIP4K2AP48426 406 aaPredicted RBP17.22■□□□□ 0.35
ZKSCAN1-204ENST00000482979 CCDC24Q8N4L8 307 aa17.22■□□□□ 0.35
ZKSCAN1-204ENST00000482979 EIF4A1P60842 406 aaKnown RBP17.21■□□□□ 0.35
ZKSCAN1-204ENST00000482979 PRR5LQ6MZQ0 368 aa17.21■□□□□ 0.35
ZKSCAN1-204ENST00000482979 TTLL6Q8N841 843 aa17.21■□□□□ 0.35
ZKSCAN1-204ENST00000482979 C8orf58Q8NAV2 365 aa17.21■□□□□ 0.35
ZKSCAN1-204ENST00000482979 LAMB4A4D0S4 1761 aa17.21■□□□□ 0.35
ZKSCAN1-204ENST00000482979 TSPYL6Q8N831 410 aa17.21■□□□□ 0.34
ZKSCAN1-204ENST00000482979 H0YIN7 160 aa17.2■□□□□ 0.34
ZKSCAN1-204ENST00000482979 TWISTNBQ3B726 338 aaPredicted RBP17.2■□□□□ 0.34
ZKSCAN1-204ENST00000482979 NFKBIEO00221 500 aa17.19■□□□□ 0.34
ZKSCAN1-204ENST00000482979 DZIP3Q86Y13 1208 aaKnown RBP17.19■□□□□ 0.34
ZKSCAN1-204ENST00000482979 TNRC6CQ9HCJ0 1690 aaKnown RBP17.18■□□□□ 0.34
ZKSCAN1-204ENST00000482979 BRIP1Q9BX63 1249 aa17.18■□□□□ 0.34
ZKSCAN1-204ENST00000482979 RRAGCQ9HB90 399 aa17.18■□□□□ 0.34
ZKSCAN1-204ENST00000482979 KDM2BQ8NHM5 1336 aa17.18■□□□□ 0.34
ZKSCAN1-204ENST00000482979 CCDC88AQ3V6T2 1871 aa17.18■□□□□ 0.34
ZKSCAN1-204ENST00000482979 TIAM2Q8IVF5 1701 aa17.17■□□□□ 0.34
ZKSCAN1-204ENST00000482979 NBPF26B4DH59 902 aa17.17■□□□□ 0.34
ZKSCAN1-204ENST00000482979 SNRPA1P09661 255 aaKnown RBP17.17■□□□□ 0.34
ZKSCAN1-204ENST00000482979 LMNB1P20700 586 aa17.17■□□□□ 0.34
ZKSCAN1-204ENST00000482979 NBPF10Q6P3W6 841 aaKnown RBP17.17■□□□□ 0.34
ZKSCAN1-204ENST00000482979 NBPF15Q8N660 670 aa17.17■□□□□ 0.34
ZKSCAN1-204ENST00000482979 RBM46Q8TBY0 533 aaKnown RBP17.17■□□□□ 0.34
ZKSCAN1-204ENST00000482979 ZNF622Q969S3 477 aaKnown RBP eCLIP17.17■□□□□ 0.34
ZKSCAN1-204ENST00000482979 PDE6BP35913 854 aa17.16■□□□□ 0.34
ZKSCAN1-204ENST00000482979 APLP1P51693 650 aa17.16■□□□□ 0.34
ZKSCAN1-204ENST00000482979 SETDB2Q96T68 719 aa17.16■□□□□ 0.34
ZKSCAN1-204ENST00000482979 RCAN3Q9UKA8 241 aa17.16■□□□□ 0.34
ZKSCAN1-204ENST00000482979 VAMP4O75379 141 aa17.15■□□□□ 0.34
ZKSCAN1-204ENST00000482979 CT47B1P0C2W7 299 aaPredicted RBP17.15■□□□□ 0.34
ZKSCAN1-204ENST00000482979 CNBD1Q8NA66 436 aa17.15■□□□□ 0.34
ZKSCAN1-204ENST00000482979 NECTIN2Q92692 538 aa17.15■□□□□ 0.34
ZKSCAN1-204ENST00000482979 ZNF219Q9P2Y4 722 aaPredicted RBP17.15■□□□□ 0.34
ZKSCAN1-204ENST00000482979 ZC3H4Q9UPT8 1303 aaKnown RBP17.15■□□□□ 0.34
ZKSCAN1-204ENST00000482979 FER1L6Q2WGJ9 1857 aa17.15■□□□□ 0.34
ZKSCAN1-204ENST00000482979 TCERG1O14776 1098 aaKnown RBP17.14■□□□□ 0.33
ZKSCAN1-204ENST00000482979 C21orf2O43822 256 aa17.14■□□□□ 0.33
ZKSCAN1-204ENST00000482979 EIF2S2P20042 333 aaKnown RBP17.14■□□□□ 0.33
ZKSCAN1-204ENST00000482979 NPM2Q86SE8 214 aaKnown RBP17.14■□□□□ 0.33
ZKSCAN1-204ENST00000482979 WDR90Q96KV7 1748 aa17.14■□□□□ 0.33
ZKSCAN1-204ENST00000482979 SLX4Q8IY92 1834 aa17.14■□□□□ 0.33
ZKSCAN1-204ENST00000482979 CACNA1SQ13698 1873 aa17.14■□□□□ 0.33
ZKSCAN1-204ENST00000482979 HDGFL1Q5TGJ6 251 aa17.13■□□□□ 0.33
ZKSCAN1-204ENST00000482979 C16orf71Q8IYS4 520 aaPredicted RBP17.13■□□□□ 0.33
ZKSCAN1-204ENST00000482979 DNAJC5GQ8N7S2 189 aa17.13■□□□□ 0.33
ZKSCAN1-204ENST00000482979 BCL2L13Q9BXK5 485 aa17.13■□□□□ 0.33
ZKSCAN1-204ENST00000482979 PDZRN3Q9UPQ7 1066 aa17.13■□□□□ 0.33
ZKSCAN1-204ENST00000482979 GLTPD2A6NH11 291 aa17.13■□□□□ 0.33
ZKSCAN1-204ENST00000482979 HOXB7P09629 217 aa17.13■□□□□ 0.33
ZKSCAN1-204ENST00000482979 HTRA3P83110 453 aa17.13■□□□□ 0.33
ZKSCAN1-204ENST00000482979 CLEC4GQ6UXB4 293 aa17.13■□□□□ 0.33
ZKSCAN1-204ENST00000482979 SRGNP10124 158 aa17.12■□□□□ 0.33
ZKSCAN1-204ENST00000482979 RARSP54136 660 aaKnown RBP17.12■□□□□ 0.33
ZKSCAN1-204ENST00000482979 ST5P78524 1137 aa17.12■□□□□ 0.33
ZKSCAN1-204ENST00000482979 SMC4Q9NTJ3 1288 aa17.12■□□□□ 0.33
ZKSCAN1-204ENST00000482979 ARFGEF2Q9Y6D5 1785 aa17.12■□□□□ 0.33
ZKSCAN1-204ENST00000482979 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
ZKSCAN1-204ENST00000482979 FSTL1Q12841 308 aa17.11■□□□□ 0.33
ZKSCAN1-204ENST00000482979 STYK1Q6J9G0 422 aa17.11■□□□□ 0.33
ZKSCAN1-204ENST00000482979 SSH1Q8WYL5 1049 aa17.11■□□□□ 0.33
ZKSCAN1-204ENST00000482979 DICER1Q9UPY3 1922 aaKnown RBP17.1■□□□□ 0.33
ZKSCAN1-204ENST00000482979 POTECB2RU33 542 aa17.1■□□□□ 0.33
ZKSCAN1-204ENST00000482979 NPHP1O15259 732 aa17.1■□□□□ 0.33
ZKSCAN1-204ENST00000482979 BCAR3O75815 825 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms