RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 SMTNP53814 917 aa5.9□□□□□ -1.46
CLCC1-209ENST00000482889 FOXK2Q01167 660 aa5.9□□□□□ -1.46
CLCC1-209ENST00000482889 SF3B2Q13435 895 aaKnown RBP5.9□□□□□ -1.46
CLCC1-209ENST00000482889 TLR1Q15399 786 aa5.9□□□□□ -1.46
CLCC1-209ENST00000482889 GNASQ5JWF2 1037 aa5.9□□□□□ -1.46
CLCC1-209ENST00000482889 HELQQ8TDG4 1101 aa5.9□□□□□ -1.46
CLCC1-209ENST00000482889 RHBDD1Q8TEB9 315 aa5.9□□□□□ -1.46
CLCC1-209ENST00000482889 CHMP7Q8WUX9 453 aaPredicted RBP5.9□□□□□ -1.46
CLCC1-209ENST00000482889 CCDC87Q9NVE4 849 aa5.9□□□□□ -1.46
CLCC1-209ENST00000482889 USP35Q9P2H5 1018 aa5.9□□□□□ -1.46
CLCC1-209ENST00000482889 LRFN2Q9ULH4 789 aa5.9□□□□□ -1.46
CLCC1-209ENST00000482889 BACH1O14867 736 aa5.89□□□□□ -1.47
CLCC1-209ENST00000482889 ZBTB39O15060 712 aa5.89□□□□□ -1.47
CLCC1-209ENST00000482889 IGHA2P01877 340 aa5.89□□□□□ -1.47
CLCC1-209ENST00000482889 P4HBP07237 508 aaKnown RBP5.89□□□□□ -1.47
CLCC1-209ENST00000482889 GMPRP36959 345 aa5.89□□□□□ -1.47
CLCC1-209ENST00000482889 COX20Q5RI15 118 aa5.89□□□□□ -1.47
CLCC1-209ENST00000482889 SH3PXD2AQ5TCZ1 1133 aa5.89□□□□□ -1.47
CLCC1-209ENST00000482889 TMEM214Q6NUQ4 689 aaKnown RBP5.89□□□□□ -1.47
CLCC1-209ENST00000482889 SV2AQ7L0J3 742 aa5.89□□□□□ -1.47
CLCC1-209ENST00000482889 TMC7Q7Z402 723 aa5.89□□□□□ -1.47
CLCC1-209ENST00000482889 SETDB2Q96T68 719 aa5.89□□□□□ -1.47
CLCC1-209ENST00000482889 TIMMDC1Q9NPL8 285 aa5.89□□□□□ -1.47
CLCC1-209ENST00000482889 SHROOM4Q9ULL8 1493 aa5.89□□□□□ -1.47
CLCC1-209ENST00000482889 A0A1B0GTH6 734 aa5.88□□□□□ -1.47
CLCC1-209ENST00000482889 A6NJY4 79 aa5.88□□□□□ -1.47
CLCC1-209ENST00000482889 CDK2AP1O14519 115 aa5.88□□□□□ -1.47
CLCC1-209ENST00000482889 FOXO3O43524 673 aa5.88□□□□□ -1.47
CLCC1-209ENST00000482889 FZD6O60353 706 aa5.88□□□□□ -1.47
CLCC1-209ENST00000482889 PTCD1O75127 700 aaKnown RBP5.88□□□□□ -1.47
CLCC1-209ENST00000482889 TCF3P15923 654 aa5.88□□□□□ -1.47
CLCC1-209ENST00000482889 TRIM22Q8IYM9 498 aa5.88□□□□□ -1.47
CLCC1-209ENST00000482889 COL26A1Q96A83 441 aa5.88□□□□□ -1.47
CLCC1-209ENST00000482889 H7C1W4 665 aa5.87□□□□□ -1.47
CLCC1-209ENST00000482889 F11P03951 625 aa5.87□□□□□ -1.47
CLCC1-209ENST00000482889 VAMP1P23763 118 aa5.87□□□□□ -1.47
CLCC1-209ENST00000482889 DSC3Q14574 896 aa5.87□□□□□ -1.47
CLCC1-209ENST00000482889 C4orf17Q53FE4 359 aa5.87□□□□□ -1.47
CLCC1-209ENST00000482889 ZNF326Q5BKZ1 582 aaKnown RBP5.87□□□□□ -1.47
CLCC1-209ENST00000482889 RGL4Q8IZJ4 473 aa5.87□□□□□ -1.47
CLCC1-209ENST00000482889 ZNF295-AS1Q8N0V1 137 aa5.87□□□□□ -1.47
CLCC1-209ENST00000482889 C2orf49Q9BVC5 232 aaPredicted RBP5.87□□□□□ -1.47
CLCC1-209ENST00000482889 WWC3Q9ULE0 1092 aa5.87□□□□□ -1.47
CLCC1-209ENST00000482889 IQSEC3Q9UPP2 1182 aaPredicted RBP5.87□□□□□ -1.47
CLCC1-209ENST00000482889 PPP1R12BO60237 982 aaPredicted RBP5.86□□□□□ -1.47
CLCC1-209ENST00000482889 EIF1AXP47813 144 aaKnown RBP5.86□□□□□ -1.47
CLCC1-209ENST00000482889 LBRQ14739 615 aaKnown RBP5.86□□□□□ -1.47
CLCC1-209ENST00000482889 SUZ12Q15022 739 aaKnown RBP5.86□□□□□ -1.47
CLCC1-209ENST00000482889 C9orf131Q5VYM1 1079 aa5.86□□□□□ -1.47
CLCC1-209ENST00000482889 ATCAYQ86WG3 371 aa5.86□□□□□ -1.47
CLCC1-209ENST00000482889 SLC9A9Q8IVB4 645 aa5.86□□□□□ -1.47
CLCC1-209ENST00000482889 VWA5B2Q8N398 1253 aa5.86□□□□□ -1.47
CLCC1-209ENST00000482889 GPR161Q8N6U8 529 aaKnown RBP5.86□□□□□ -1.47
CLCC1-209ENST00000482889 FAM161BQ96MY7 647 aa5.86□□□□□ -1.47
CLCC1-209ENST00000482889 NIFKQ9BYG3 293 aaKnown RBP5.86□□□□□ -1.47
CLCC1-209ENST00000482889 RBCK1Q9BYM8 510 aa5.86□□□□□ -1.47
CLCC1-209ENST00000482889 BACH2Q9BYV9 841 aa5.86□□□□□ -1.47
CLCC1-209ENST00000482889 QTRT2Q9H974 415 aaKnown RBP5.86□□□□□ -1.47
CLCC1-209ENST00000482889 CUEDC1Q9NWM3 386 aaPredicted RBP5.86□□□□□ -1.47
CLCC1-209ENST00000482889 SCHIP1Q9P0W5 487 aaPredicted RBP5.86□□□□□ -1.47
CLCC1-209ENST00000482889 CDC14CA4D256 554 aa5.85□□□□□ -1.47
CLCC1-209ENST00000482889 MRPL58Q14197 206 aaKnown RBP5.85□□□□□ -1.47
CLCC1-209ENST00000482889 DBN1Q16643 649 aa5.85□□□□□ -1.47
CLCC1-209ENST00000482889 EAPPQ56P03 285 aaPredicted RBP5.85□□□□□ -1.47
CLCC1-209ENST00000482889 C16orf46Q6P387 395 aa5.85□□□□□ -1.47
CLCC1-209ENST00000482889 ZSCAN29Q8IWY8 852 aaPredicted RBP5.85□□□□□ -1.47
CLCC1-209ENST00000482889 ZDHHC1Q8WTX9 485 aa5.85□□□□□ -1.47
CLCC1-209ENST00000482889 ZNF837Q96EG3 531 aaPredicted RBP5.85□□□□□ -1.47
CLCC1-209ENST00000482889 GAS2L1Q99501 681 aaPredicted RBP5.85□□□□□ -1.47
CLCC1-209ENST00000482889 TREHO43280 583 aa5.84□□□□□ -1.47
CLCC1-209ENST00000482889 FAM13AO94988 1023 aa5.84□□□□□ -1.47
CLCC1-209ENST00000482889 PHKA2P46019 1235 aa5.84□□□□□ -1.47
CLCC1-209ENST00000482889 TSNAXIP1Q2TAA8 658 aa5.84□□□□□ -1.47
CLCC1-209ENST00000482889 RIPOR1Q6ZS17 1223 aa5.84□□□□□ -1.47
CLCC1-209ENST00000482889 KLRG1Q96E93 195 aa5.84□□□□□ -1.47
CLCC1-209ENST00000482889 GPR182O15218 404 aa5.83□□□□□ -1.48
CLCC1-209ENST00000482889 MSX1P28360 303 aa5.83□□□□□ -1.48
CLCC1-209ENST00000482889 PLA2G4AP47712 749 aa5.83□□□□□ -1.48
CLCC1-209ENST00000482889 KRT76Q01546 638 aa5.83□□□□□ -1.48
CLCC1-209ENST00000482889 FMR1Q06787 632 aaKnown RBP eCLIP5.83□□□□□ -1.48
CLCC1-209ENST00000482889 COL19A1Q14993 1142 aa5.83□□□□□ -1.48
CLCC1-209ENST00000482889 TEAD4Q15561 434 aa5.83□□□□□ -1.48
CLCC1-209ENST00000482889 FOXR1Q6PIV2 292 aa5.83□□□□□ -1.48
CLCC1-209ENST00000482889 POTEAQ6S8J7 498 aa5.83□□□□□ -1.48
CLCC1-209ENST00000482889 COL25A1Q9BXS0 654 aaPredicted RBP5.83□□□□□ -1.48
CLCC1-209ENST00000482889 NUCKS1Q9H1E3 243 aaKnown RBP5.83□□□□□ -1.48
CLCC1-209ENST00000482889 CRISPLD1Q9H336 500 aa5.83□□□□□ -1.48
CLCC1-209ENST00000482889 ZDHHC3Q9NYG2 299 aa5.83□□□□□ -1.48
CLCC1-209ENST00000482889 PARP3Q9Y6F1 533 aa5.83□□□□□ -1.48
CLCC1-209ENST00000482889 LORP23490 312 aaPredicted RBP5.82□□□□□ -1.48
CLCC1-209ENST00000482889 HDLBPQ00341 1268 aaKnown RBP5.82□□□□□ -1.48
CLCC1-209ENST00000482889 NBPF1Q3BBV0 1214 aa5.82□□□□□ -1.48
CLCC1-209ENST00000482889 PGBD3Q8N328 593 aa5.82□□□□□ -1.48
CLCC1-209ENST00000482889 STIM2Q9P246 746 aa5.82□□□□□ -1.48
CLCC1-209ENST00000482889 HCN4Q9Y3Q4 1203 aa5.82□□□□□ -1.48
CLCC1-209ENST00000482889 EML1O00423 815 aa5.81□□□□□ -1.48
CLCC1-209ENST00000482889 THBS1P07996 1170 aa5.81□□□□□ -1.48
CLCC1-209ENST00000482889 SLURP2P0DP57 97 aa5.81□□□□□ -1.48
CLCC1-209ENST00000482889 ATP4AP20648 1035 aa5.81□□□□□ -1.48
CLCC1-209ENST00000482889 PLCB3Q01970 1234 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms