RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 CARMIL3Q8ND23 1372 aa21.1■□□□□ 0.97
CCDC78-212ENST00000482152 ZNF521Q96K83 1311 aa21.09■□□□□ 0.97
CCDC78-212ENST00000482152 BICDL1Q6ZP65 573 aa21.09■□□□□ 0.97
CCDC78-212ENST00000482152 NECTIN2Q92692 538 aa21.09■□□□□ 0.97
CCDC78-212ENST00000482152 C10orf71Q711Q0 1435 aa21.08■□□□□ 0.97
CCDC78-212ENST00000482152 NLGN2Q8NFZ4 835 aa21.08■□□□□ 0.97
CCDC78-212ENST00000482152 CHPF2Q9P2E5 772 aa21.08■□□□□ 0.97
CCDC78-212ENST00000482152 PDZRN3Q9UPQ7 1066 aa21.08■□□□□ 0.97
CCDC78-212ENST00000482152 SCN7AQ01118 1682 aa21.08■□□□□ 0.96
CCDC78-212ENST00000482152 ELL2O00472 640 aaPredicted RBP21.07■□□□□ 0.96
CCDC78-212ENST00000482152 TWISTNBQ3B726 338 aaPredicted RBP21.07■□□□□ 0.96
CCDC78-212ENST00000482152 GIGYF2Q6Y7W6 1299 aaKnown RBP21.07■□□□□ 0.96
CCDC78-212ENST00000482152 TTLL7Q6ZT98 887 aa21.07■□□□□ 0.96
CCDC78-212ENST00000482152 COPS6Q7L5N1 327 aa21.07■□□□□ 0.96
CCDC78-212ENST00000482152 FANCIQ9NVI1 1328 aa21.06■□□□□ 0.96
CCDC78-212ENST00000482152 HLFQ16534 295 aa21.06■□□□□ 0.96
CCDC78-212ENST00000482152 PROSER3Q2NL68 480 aa21.06■□□□□ 0.96
CCDC78-212ENST00000482152 TPTE2Q6XPS3 522 aa21.06■□□□□ 0.96
CCDC78-212ENST00000482152 NIP7Q9Y221 180 aaKnown RBP eCLIP21.06■□□□□ 0.96
CCDC78-212ENST00000482152 HSP90AB3PQ58FF7 597 aa21.05■□□□□ 0.96
CCDC78-212ENST00000482152 TSPYL6Q8N831 410 aa21.05■□□□□ 0.96
CCDC78-212ENST00000482152 XAGE3Q8WTP9 111 aa21.05■□□□□ 0.96
CCDC78-212ENST00000482152 E9PSI1 815 aa21.04■□□□□ 0.96
CCDC78-212ENST00000482152 GPR162Q16538 588 aa21.04■□□□□ 0.96
CCDC78-212ENST00000482152 BRIP1Q9BX63 1249 aa21.04■□□□□ 0.96
CCDC78-212ENST00000482152 STK31Q9BXU1 1019 aa21.04■□□□□ 0.96
CCDC78-212ENST00000482152 ZBTB3Q9H5J0 574 aa21.04■□□□□ 0.96
CCDC78-212ENST00000482152 BCORQ6W2J9 1755 aa21.04■□□□□ 0.96
CCDC78-212ENST00000482152 ATP10DQ9P241 1426 aa21.04■□□□□ 0.96
CCDC78-212ENST00000482152 NPHP1O15259 732 aa21.03■□□□□ 0.96
CCDC78-212ENST00000482152 GRIN3BO60391 1043 aa21.03■□□□□ 0.96
CCDC78-212ENST00000482152 ANXA1P04083 346 aa21.03■□□□□ 0.96
CCDC78-212ENST00000482152 ST5P78524 1137 aa21.03■□□□□ 0.96
CCDC78-212ENST00000482152 AIMP1Q12904 312 aaKnown RBP21.03■□□□□ 0.96
CCDC78-212ENST00000482152 ANKRD13DQ6ZTN6 518 aa21.03■□□□□ 0.96
CCDC78-212ENST00000482152 NBPF5PQ86XG9 351 aaPredicted RBP21.03■□□□□ 0.96
CCDC78-212ENST00000482152 CNBD1Q8NA66 436 aa21.03■□□□□ 0.96
CCDC78-212ENST00000482152 PLBD2Q8NHP8 589 aa21.03■□□□□ 0.96
CCDC78-212ENST00000482152 NYXQ9GZU5 481 aa21.03■□□□□ 0.96
CCDC78-212ENST00000482152 KIF13BQ9NQT8 1826 aa21.02■□□□□ 0.96
CCDC78-212ENST00000482152 PDE6BP35913 854 aa21.02■□□□□ 0.96
CCDC78-212ENST00000482152 PARP10Q53GL7 1025 aa21.02■□□□□ 0.96
CCDC78-212ENST00000482152 ZNF34Q8IZ26 560 aa21.02■□□□□ 0.96
CCDC78-212ENST00000482152 SPINK5Q9NQ38 1064 aaPredicted RBP21.02■□□□□ 0.96
CCDC78-212ENST00000482152 NRXN2Q9P2S2 1712 aa21.01■□□□□ 0.95
CCDC78-212ENST00000482152 VAMP4O75379 141 aa21.01■□□□□ 0.95
CCDC78-212ENST00000482152 EXOSC9Q06265 439 aaKnown RBP21.01■□□□□ 0.95
CCDC78-212ENST00000482152 PRR5LQ6MZQ0 368 aa21.01■□□□□ 0.95
CCDC78-212ENST00000482152 A0A0G2JLW4 131 aa21■□□□□ 0.95
CCDC78-212ENST00000482152 DDX58O95786 925 aaKnown RBP21■□□□□ 0.95
CCDC78-212ENST00000482152 PPP1R42Q7Z4L9 355 aa21■□□□□ 0.95
CCDC78-212ENST00000482152 PIM2Q9P1W9 311 aa21■□□□□ 0.95
CCDC78-212ENST00000482152 PXDNLA1KZ92 1463 aa21■□□□□ 0.95
CCDC78-212ENST00000482152 DPEP1P16444 411 aa20.99■□□□□ 0.95
CCDC78-212ENST00000482152 SLFN5Q08AF3 891 aa20.99■□□□□ 0.95
CCDC78-212ENST00000482152 TCIRG1Q13488 830 aa20.99■□□□□ 0.95
CCDC78-212ENST00000482152 IBTKQ9P2D0 1353 aaPredicted RBP20.98■□□□□ 0.95
CCDC78-212ENST00000482152 H0YIN7 160 aa20.98■□□□□ 0.95
CCDC78-212ENST00000482152 KCNA3P22001 575 aa20.98■□□□□ 0.95
CCDC78-212ENST00000482152 GTF2E1P29083 439 aaPredicted RBP20.98■□□□□ 0.95
CCDC78-212ENST00000482152 RNF123Q5XPI4 1314 aa20.98■□□□□ 0.95
CCDC78-212ENST00000482152 PELP1Q8IZL8 1130 aaKnown RBP20.97■□□□□ 0.95
CCDC78-212ENST00000482152 SLC4A2P04920 1241 aa20.96■□□□□ 0.95
CCDC78-212ENST00000482152 TRIM28Q13263 835 aaKnown RBP20.96■□□□□ 0.95
CCDC78-212ENST00000482152 RIC3Q7Z5B4 369 aa20.96■□□□□ 0.95
CCDC78-212ENST00000482152 ZNF428Q96B54 188 aa20.96■□□□□ 0.95
CCDC78-212ENST00000482152 PHAXQ9H814 394 aaKnown RBP20.96■□□□□ 0.95
CCDC78-212ENST00000482152 AFDNP55196 1824 aaKnown RBP20.96■□□□□ 0.95
CCDC78-212ENST00000482152 SUSD4Q5VX71 490 aa20.95■□□□□ 0.94
CCDC78-212ENST00000482152 C2CD5Q86YS7 1000 aa20.95■□□□□ 0.94
CCDC78-212ENST00000482152 TRMT2AQ8IZ69 625 aaKnown RBP20.95■□□□□ 0.94
CCDC78-212ENST00000482152 NUP98P52948 1817 aa20.94■□□□□ 0.94
CCDC78-212ENST00000482152 KLRG2A4D1S0 409 aaPredicted RBP20.94■□□□□ 0.94
CCDC78-212ENST00000482152 YBX3P16989 372 aaKnown RBP eCLIP20.94■□□□□ 0.94
CCDC78-212ENST00000482152 GPTP24298 496 aa20.94■□□□□ 0.94
CCDC78-212ENST00000482152 DALRD3Q5D0E6 543 aaKnown RBP20.94■□□□□ 0.94
CCDC78-212ENST00000482152 UTP14AQ9BVJ6 771 aaKnown RBP20.94■□□□□ 0.94
CCDC78-212ENST00000482152 UBN2Q6ZU65 1347 aa20.94■□□□□ 0.94
CCDC78-212ENST00000482152 CHRNA5P30532 468 aa20.93■□□□□ 0.94
CCDC78-212ENST00000482152 FAM177BA6PVY3 158 aa20.92■□□□□ 0.94
CCDC78-212ENST00000482152 NTSR2O95665 410 aa20.92■□□□□ 0.94
CCDC78-212ENST00000482152 STYK1Q6J9G0 422 aa20.92■□□□□ 0.94
CCDC78-212ENST00000482152 KSR2Q6VAB6 950 aa20.92■□□□□ 0.94
CCDC78-212ENST00000482152 NLRP10Q86W26 655 aa20.92■□□□□ 0.94
CCDC78-212ENST00000482152 TTLL6Q8N841 843 aa20.92■□□□□ 0.94
CCDC78-212ENST00000482152 ISCA1Q9BUE6 129 aa20.92■□□□□ 0.94
CCDC78-212ENST00000482152 BCS1LQ9Y276 419 aa20.92■□□□□ 0.94
CCDC78-212ENST00000482152 CT47B1P0C2W7 299 aaPredicted RBP20.91■□□□□ 0.94
CCDC78-212ENST00000482152 SRGNP10124 158 aa20.91■□□□□ 0.94
CCDC78-212ENST00000482152 SLC10A5Q5PT55 438 aa20.91■□□□□ 0.94
CCDC78-212ENST00000482152 MASTLQ96GX5 879 aa20.91■□□□□ 0.94
CCDC78-212ENST00000482152 KIAA1551Q9HCM1 1747 aa20.9■□□□□ 0.94
CCDC78-212ENST00000482152 RIC1Q4ADV7 1423 aa20.9■□□□□ 0.94
CCDC78-212ENST00000482152 CNKSR1Q969H4 720 aa20.9■□□□□ 0.94
CCDC78-212ENST00000482152 METTL22Q9BUU2 404 aaPredicted RBP20.9■□□□□ 0.94
CCDC78-212ENST00000482152 NPR1P16066 1061 aa20.89■□□□□ 0.93
CCDC78-212ENST00000482152 HNRNPUQ00839 825 aaKnown RBP eCLIP20.89■□□□□ 0.93
CCDC78-212ENST00000482152 FLIIQ13045 1269 aa20.89■□□□□ 0.93
CCDC78-212ENST00000482152 ERFEQ4G0M1 354 aa20.89■□□□□ 0.93
CCDC78-212ENST00000482152 CCDC24Q8N4L8 307 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms