RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 TRIM32Q13049 653 aa8.41□□□□□ -1.06
NCK1-208ENST00000482071 CTC1Q2NKJ3 1217 aa8.41□□□□□ -1.06
NCK1-208ENST00000482071 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.41□□□□□ -1.06
NCK1-208ENST00000482071 VSIG10Q8N0Z9 540 aa8.41□□□□□ -1.06
NCK1-208ENST00000482071 NGDNQ8NEJ9 315 aaKnown RBP8.41□□□□□ -1.06
NCK1-208ENST00000482071 HLA-CQ95604 372 aa8.41□□□□□ -1.06
NCK1-208ENST00000482071 COG3Q96JB2 828 aa8.41□□□□□ -1.06
NCK1-208ENST00000482071 ORAI2Q96SN7 254 aa8.41□□□□□ -1.06
NCK1-208ENST00000482071 USB1Q9BQ65 265 aaKnown RBP8.41□□□□□ -1.06
NCK1-208ENST00000482071 DACH1Q9UI36 760 aa8.41□□□□□ -1.06
NCK1-208ENST00000482071 NFAT5O94916 1531 aa8.4□□□□□ -1.06
NCK1-208ENST00000482071 ZNF335Q9H4Z2 1342 aaPredicted RBP8.4□□□□□ -1.06
NCK1-208ENST00000482071 TULP1O00294 542 aaPredicted RBP8.4□□□□□ -1.06
NCK1-208ENST00000482071 PDE3BQ13370 1112 aa8.4□□□□□ -1.06
NCK1-208ENST00000482071 CFAP53Q96M91 514 aa8.4□□□□□ -1.06
NCK1-208ENST00000482071 PLEKHF1Q96S99 279 aa8.4□□□□□ -1.06
NCK1-208ENST00000482071 NHSL1Q5SYE7 1610 aa8.4□□□□□ -1.07
NCK1-208ENST00000482071 PXDNQ92626 1479 aa8.39□□□□□ -1.07
NCK1-208ENST00000482071 SBNO1A3KN83 1393 aa8.39□□□□□ -1.07
NCK1-208ENST00000482071 MSH6P52701 1360 aa8.39□□□□□ -1.07
NCK1-208ENST00000482071 USP19O94966 1318 aa8.39□□□□□ -1.07
NCK1-208ENST00000482071 IL13P35225 146 aa8.39□□□□□ -1.07
NCK1-208ENST00000482071 ESCO1Q5FWF5 840 aa8.39□□□□□ -1.07
NCK1-208ENST00000482071 LCE2AQ5TA79 106 aaPredicted RBP8.39□□□□□ -1.07
NCK1-208ENST00000482071 TRMT2AQ8IZ69 625 aaKnown RBP8.39□□□□□ -1.07
NCK1-208ENST00000482071 LTN1O94822 1766 aa8.38□□□□□ -1.07
NCK1-208ENST00000482071 AXIN1O15169 862 aa8.38□□□□□ -1.07
NCK1-208ENST00000482071 DIAPH1O60610 1272 aaKnown RBP8.38□□□□□ -1.07
NCK1-208ENST00000482071 ATF3P18847 181 aa8.38□□□□□ -1.07
NCK1-208ENST00000482071 FBLN1P23142 703 aa8.38□□□□□ -1.07
NCK1-208ENST00000482071 WDR43Q15061 677 aaKnown RBP eCLIP8.38□□□□□ -1.07
NCK1-208ENST00000482071 CCDC27Q2M243 656 aa8.38□□□□□ -1.07
NCK1-208ENST00000482071 GPCPD1Q9NPB8 672 aa8.38□□□□□ -1.07
NCK1-208ENST00000482071 FAM217BQ9NTX9 383 aaPredicted RBP8.38□□□□□ -1.07
NCK1-208ENST00000482071 MED1Q15648 1581 aaPredicted RBP8.38□□□□□ -1.07
NCK1-208ENST00000482071 COL18A1P39060 1754 aa8.38□□□□□ -1.07
NCK1-208ENST00000482071 TNNT2P45379 298 aaPredicted RBP8.37□□□□□ -1.07
NCK1-208ENST00000482071 RUNDC1Q96C34 613 aa8.37□□□□□ -1.07
NCK1-208ENST00000482071 EMILIN1Q9Y6C2 1016 aa8.37□□□□□ -1.07
NCK1-208ENST00000482071 SOS2Q07890 1332 aaPredicted RBP8.36□□□□□ -1.07
NCK1-208ENST00000482071 MAP3K19Q56UN5 1328 aa8.36□□□□□ -1.07
NCK1-208ENST00000482071 RNF123Q5XPI4 1314 aa8.36□□□□□ -1.07
NCK1-208ENST00000482071 ABCC6O95255 1503 aa8.36□□□□□ -1.07
NCK1-208ENST00000482071 TTC24A2A3L6 582 aaPredicted RBP8.36□□□□□ -1.07
NCK1-208ENST00000482071 FOXO3O43524 673 aa8.36□□□□□ -1.07
NCK1-208ENST00000482071 SMPD1P17405 629 aa8.36□□□□□ -1.07
NCK1-208ENST00000482071 CLCN1P35523 988 aa8.36□□□□□ -1.07
NCK1-208ENST00000482071 PSME1Q06323 249 aa8.36□□□□□ -1.07
NCK1-208ENST00000482071 KRT28Q7Z3Y7 464 aa8.36□□□□□ -1.07
NCK1-208ENST00000482071 SNIP1Q8TAD8 396 aaKnown RBP8.36□□□□□ -1.07
NCK1-208ENST00000482071 MRGPRX2Q96LB1 330 aa8.36□□□□□ -1.07
NCK1-208ENST00000482071 NUDCQ9Y266 331 aa8.36□□□□□ -1.07
NCK1-208ENST00000482071 CAMTA1Q9Y6Y1 1673 aa8.36□□□□□ -1.07
NCK1-208ENST00000482071 NCAPD2Q15021 1401 aa8.36□□□□□ -1.07
NCK1-208ENST00000482071 RTL1A6NKG5 1358 aa8.35□□□□□ -1.07
NCK1-208ENST00000482071 KDRP35968 1356 aa8.35□□□□□ -1.07
NCK1-208ENST00000482071 NPHP3Q7Z494 1330 aa8.35□□□□□ -1.07
NCK1-208ENST00000482071 DLG5Q8TDM6 1919 aa8.35□□□□□ -1.07
NCK1-208ENST00000482071 GUCA2AQ02747 115 aa8.35□□□□□ -1.07
NCK1-208ENST00000482071 BRINP3Q76B58 766 aa8.35□□□□□ -1.07
NCK1-208ENST00000482071 C14orf37Q86TY3 774 aa8.35□□□□□ -1.07
NCK1-208ENST00000482071 ABTB2Q8N961 1025 aa8.35□□□□□ -1.07
NCK1-208ENST00000482071 RSPH6AQ9H0K4 717 aa8.35□□□□□ -1.07
NCK1-208ENST00000482071 SLAIN2Q9P270 581 aa8.35□□□□□ -1.07
NCK1-208ENST00000482071 GMPR2Q9P2T1 348 aaKnown RBP8.35□□□□□ -1.07
NCK1-208ENST00000482071 FLT4P35916 1363 aa8.35□□□□□ -1.07
NCK1-208ENST00000482071 SPATA31A3Q5VYP0 1347 aa8.34□□□□□ -1.07
NCK1-208ENST00000482071 APAF1O14727 1248 aa8.34□□□□□ -1.07
NCK1-208ENST00000482071 RRS1Q15050 365 aaKnown RBP8.34□□□□□ -1.07
NCK1-208ENST00000482071 TREML4Q6UXN2 200 aa8.34□□□□□ -1.07
NCK1-208ENST00000482071 ARHGEF25Q86VW2 580 aa8.34□□□□□ -1.07
NCK1-208ENST00000482071 KCNH5Q8NCM2 988 aa8.34□□□□□ -1.07
NCK1-208ENST00000482071 REPIN1Q9BWE0 567 aaKnown RBP8.34□□□□□ -1.07
NCK1-208ENST00000482071 PNNQ9H307 717 aaKnown RBP8.34□□□□□ -1.07
NCK1-208ENST00000482071 LMO7Q8WWI1 1683 aa8.34□□□□□ -1.08
NCK1-208ENST00000482071 AHDC1Q5TGY3 1603 aaPredicted RBP8.33□□□□□ -1.08
NCK1-208ENST00000482071 J3QL48 77 aa8.33□□□□□ -1.08
NCK1-208ENST00000482071 GCP02774 474 aa8.33□□□□□ -1.08
NCK1-208ENST00000482071 JUNDP17535 347 aa8.33□□□□□ -1.08
NCK1-208ENST00000482071 SKOR1P84550 965 aa8.33□□□□□ -1.08
NCK1-208ENST00000482071 SLFN5Q08AF3 891 aa8.33□□□□□ -1.08
NCK1-208ENST00000482071 EIF4A2Q14240 407 aaKnown RBP8.33□□□□□ -1.08
NCK1-208ENST00000482071 HSP90AB2PQ58FF8 381 aa8.33□□□□□ -1.08
NCK1-208ENST00000482071 TNS3Q68CZ2 1445 aa8.33□□□□□ -1.08
NCK1-208ENST00000482071 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.33□□□□□ -1.08
NCK1-208ENST00000482071 WDR63Q8IWG1 891 aa8.33□□□□□ -1.08
NCK1-208ENST00000482071 WWC1Q8IX03 1113 aa8.33□□□□□ -1.08
NCK1-208ENST00000482071 TCP11L2Q8N4U5 519 aa8.33□□□□□ -1.08
NCK1-208ENST00000482071 IP6K1Q92551 441 aa8.33□□□□□ -1.08
NCK1-208ENST00000482071 ABCA3Q99758 1704 aa8.33□□□□□ -1.08
NCK1-208ENST00000482071 RGPD5Q99666 1765 aa8.33□□□□□ -1.08
NCK1-208ENST00000482071 IGSF1Q8N6C5 1336 aa8.32□□□□□ -1.08
NCK1-208ENST00000482071 U2AF1L5P0DN76 240 aaPredicted RBP8.32□□□□□ -1.08
NCK1-208ENST00000482071 HOXC9P31274 260 aa8.32□□□□□ -1.08
NCK1-208ENST00000482071 WNT7BP56706 349 aa8.32□□□□□ -1.08
NCK1-208ENST00000482071 U2AF1Q01081 240 aaKnown RBP eCLIP8.32□□□□□ -1.08
NCK1-208ENST00000482071 DUSP27Q5VZP5 1158 aa8.32□□□□□ -1.08
NCK1-208ENST00000482071 SYMPKQ92797 1274 aaKnown RBP8.32□□□□□ -1.08
NCK1-208ENST00000482071 ARHGEF10O15013 1369 aa8.32□□□□□ -1.08
NCK1-208ENST00000482071 CPDO75976 1380 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms