RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 SPG7Q9UQ90 795 aa12.38□□□□□ -0.43
HLA-B-253ENST00000481849 KIF20BQ96Q89 1820 aa12.38□□□□□ -0.43
HLA-B-253ENST00000481849 PALLDQ8WX93 1383 aa12.38□□□□□ -0.43
HLA-B-253ENST00000481849 WASHC2AQ641Q2 1341 aa12.37□□□□□ -0.43
HLA-B-253ENST00000481849 RGS19P49795 217 aa12.37□□□□□ -0.43
HLA-B-253ENST00000481849 SLC4A5Q9BY07 1137 aa12.37□□□□□ -0.43
HLA-B-253ENST00000481849 PANK3Q9H999 370 aa12.37□□□□□ -0.43
HLA-B-253ENST00000481849 NLGN2Q8NFZ4 835 aa12.36□□□□□ -0.43
HLA-B-253ENST00000481849 PIGBQ92521 554 aa12.36□□□□□ -0.43
HLA-B-253ENST00000481849 ADAM33Q9BZ11 813 aa12.36□□□□□ -0.43
HLA-B-253ENST00000481849 EIF4A2Q14240 407 aaKnown RBP12.35□□□□□ -0.43
HLA-B-253ENST00000481849 SMIM5Q71RC9 77 aa12.35□□□□□ -0.43
HLA-B-253ENST00000481849 GOLGA8CPA6NN73 597 aa12.34□□□□□ -0.43
HLA-B-253ENST00000481849 PHF14O94880 888 aa12.34□□□□□ -0.43
HLA-B-253ENST00000481849 SMARCC1Q92922 1105 aaPredicted RBP12.34□□□□□ -0.43
HLA-B-253ENST00000481849 AK7Q96M32 723 aa12.34□□□□□ -0.43
HLA-B-253ENST00000481849 TMOD3Q9NYL9 352 aa12.34□□□□□ -0.43
HLA-B-253ENST00000481849 PHKG2P15735 406 aa12.33□□□□□ -0.44
HLA-B-253ENST00000481849 LY75O60449 1722 aa12.32□□□□□ -0.44
HLA-B-253ENST00000481849 NCAPD2Q15021 1401 aa12.32□□□□□ -0.44
HLA-B-253ENST00000481849 AMIGO3Q86WK7 504 aa12.32□□□□□ -0.44
HLA-B-253ENST00000481849 IFNL2Q8IZJ0 200 aa12.32□□□□□ -0.44
HLA-B-253ENST00000481849 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
HLA-B-253ENST00000481849 ASAP1Q9ULH1 1129 aa12.32□□□□□ -0.44
HLA-B-253ENST00000481849 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
HLA-B-253ENST00000481849 PTPN5P54829 565 aa12.31□□□□□ -0.44
HLA-B-253ENST00000481849 MORC1Q86VD1 984 aa12.31□□□□□ -0.44
HLA-B-253ENST00000481849 MRPL50Q8N5N7 158 aaKnown RBP12.31□□□□□ -0.44
HLA-B-253ENST00000481849 LINC00116Q8NCU8 138 aa12.31□□□□□ -0.44
HLA-B-253ENST00000481849 PCDHGA10Q9Y5H3 936 aa12.31□□□□□ -0.44
HLA-B-253ENST00000481849 A0A0C4DFX4 3053 aa12.3□□□□□ -0.44
HLA-B-253ENST00000481849 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.3□□□□□ -0.44
HLA-B-253ENST00000481849 LOC102724428A0A0B4J2F2 783 aa12.3□□□□□ -0.44
HLA-B-253ENST00000481849 TOMM70O94826 608 aa12.3□□□□□ -0.44
HLA-B-253ENST00000481849 SIK1P57059 783 aa12.3□□□□□ -0.44
HLA-B-253ENST00000481849 FLAD1Q8NFF5 587 aa12.3□□□□□ -0.44
HLA-B-253ENST00000481849 TOGARAM1Q9Y4F4 1720 aa12.3□□□□□ -0.44
HLA-B-253ENST00000481849 GRIN3BO60391 1043 aa12.29□□□□□ -0.44
HLA-B-253ENST00000481849 YBX3P16989 372 aaKnown RBP eCLIP12.29□□□□□ -0.44
HLA-B-253ENST00000481849 ATP6V1AP38606 617 aa12.29□□□□□ -0.44
HLA-B-253ENST00000481849 ITPK1Q13572 414 aa12.29□□□□□ -0.44
HLA-B-253ENST00000481849 AEBP1Q8IUX7 1158 aa12.29□□□□□ -0.44
HLA-B-253ENST00000481849 ATG3Q9NT62 314 aa12.29□□□□□ -0.44
HLA-B-253ENST00000481849 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.29□□□□□ -0.44
HLA-B-253ENST00000481849 TUBGCP6Q96RT7 1819 aa12.29□□□□□ -0.44
HLA-B-253ENST00000481849 IGSF1Q8N6C5 1336 aa12.29□□□□□ -0.44
HLA-B-253ENST00000481849 PKD1L3Q7Z443 1732 aa12.28□□□□□ -0.44
HLA-B-253ENST00000481849 BHMG1C9JSJ3 638 aaPredicted RBP12.28□□□□□ -0.44
HLA-B-253ENST00000481849 GNPATO15228 680 aa12.28□□□□□ -0.44
HLA-B-253ENST00000481849 PLEKHO1Q53GL0 409 aaPredicted RBP12.28□□□□□ -0.44
HLA-B-253ENST00000481849 TYW1BQ6NUM6 668 aa12.28□□□□□ -0.44
HLA-B-253ENST00000481849 ZNF530Q6P9A1 599 aaPredicted RBP12.28□□□□□ -0.44
HLA-B-253ENST00000481849 SPRYD3Q8NCJ5 442 aa12.28□□□□□ -0.44
HLA-B-253ENST00000481849 ABHD8Q96I13 439 aa12.28□□□□□ -0.44
HLA-B-253ENST00000481849 NBPF3Q9H094 633 aa12.28□□□□□ -0.44
HLA-B-253ENST00000481849 KNSTRNQ9Y448 316 aa12.28□□□□□ -0.44
HLA-B-253ENST00000481849 QSER1Q2KHR3 1735 aa12.28□□□□□ -0.44
HLA-B-253ENST00000481849 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
HLA-B-253ENST00000481849 C5P01031 1676 aa12.27□□□□□ -0.45
HLA-B-253ENST00000481849 HMGB2P26583 209 aaKnown RBP12.27□□□□□ -0.45
HLA-B-253ENST00000481849 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
HLA-B-253ENST00000481849 FBXW7Q969H0 707 aa12.27□□□□□ -0.45
HLA-B-253ENST00000481849 DPYSL4O14531 572 aa12.26□□□□□ -0.45
HLA-B-253ENST00000481849 CAMK2BQ13554 666 aa12.26□□□□□ -0.45
HLA-B-253ENST00000481849 C4BP0C0L5 1744 aa12.25□□□□□ -0.45
HLA-B-253ENST00000481849 PPP1R3GB7ZBB8 358 aa12.25□□□□□ -0.45
HLA-B-253ENST00000481849 SSFA2P28290 1259 aa12.25□□□□□ -0.45
HLA-B-253ENST00000481849 CABP4P57796 275 aa12.25□□□□□ -0.45
HLA-B-253ENST00000481849 CNGB1Q14028 1251 aaPredicted RBP12.25□□□□□ -0.45
HLA-B-253ENST00000481849 SULT6B1Q6IMI4 303 aa12.25□□□□□ -0.45
HLA-B-253ENST00000481849 WNT2BQ93097 391 aa12.25□□□□□ -0.45
HLA-B-253ENST00000481849 DCAF5Q96JK2 942 aa12.25□□□□□ -0.45
HLA-B-253ENST00000481849 CD2APQ9Y5K6 639 aa12.25□□□□□ -0.45
HLA-B-253ENST00000481849 KIF7Q2M1P5 1343 aa12.25□□□□□ -0.45
HLA-B-253ENST00000481849 ERVV-2B6SEH9 535 aa12.24□□□□□ -0.45
HLA-B-253ENST00000481849 HSP90AB1P08238 724 aaKnown RBP12.24□□□□□ -0.45
HLA-B-253ENST00000481849 MTHFSP49914 203 aa12.24□□□□□ -0.45
HLA-B-253ENST00000481849 C1orf141Q5JVX7 400 aa12.24□□□□□ -0.45
HLA-B-253ENST00000481849 SLC4A9Q96Q91 983 aa12.24□□□□□ -0.45
HLA-B-253ENST00000481849 KDM6AO15550 1401 aaPredicted RBP12.23□□□□□ -0.45
HLA-B-253ENST00000481849 IL13P35225 146 aa12.23□□□□□ -0.45
HLA-B-253ENST00000481849 AMOTQ4VCS5 1084 aa12.23□□□□□ -0.45
HLA-B-253ENST00000481849 MAP2P11137 1827 aaKnown RBP12.23□□□□□ -0.45
HLA-B-253ENST00000481849 COL24A1Q17RW2 1714 aa12.23□□□□□ -0.45
HLA-B-253ENST00000481849 PTCD1O75127 700 aaKnown RBP12.22□□□□□ -0.45
HLA-B-253ENST00000481849 MMP10P09238 476 aa12.22□□□□□ -0.45
HLA-B-253ENST00000481849 CC2D1BQ5T0F9 858 aaKnown RBP12.22□□□□□ -0.45
HLA-B-253ENST00000481849 TRAPPC3LQ5T215 181 aa12.22□□□□□ -0.45
HLA-B-253ENST00000481849 PRDM10Q9NQV6 1147 aa12.22□□□□□ -0.45
HLA-B-253ENST00000481849 RTCBQ9Y3I0 505 aaKnown RBP12.22□□□□□ -0.45
HLA-B-253ENST00000481849 ITGB4P16144 1822 aa12.22□□□□□ -0.45
HLA-B-253ENST00000481849 KDRP35968 1356 aa12.21□□□□□ -0.45
HLA-B-253ENST00000481849 DLL1O00548 723 aa12.21□□□□□ -0.45
HLA-B-253ENST00000481849 THSD4Q6ZMP0 1018 aa12.21□□□□□ -0.45
HLA-B-253ENST00000481849 NFATC2IPQ8NCF5 419 aa12.21□□□□□ -0.45
HLA-B-253ENST00000481849 EPAS1Q99814 870 aa12.21□□□□□ -0.45
HLA-B-253ENST00000481849 PITPNM2Q9BZ72 1349 aa12.2□□□□□ -0.46
HLA-B-253ENST00000481849 HMOX1P09601 288 aa12.2□□□□□ -0.46
HLA-B-253ENST00000481849 COL9A1P20849 921 aa12.2□□□□□ -0.46
HLA-B-253ENST00000481849 RABGEF1Q9UJ41 708 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms