RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ZMYM3Q14202 1370 aa4.79□□□□□ -1.64
SMC6-208ENST00000481708 RGPD8O14715 1765 aaPredicted RBP4.79□□□□□ -1.64
SMC6-208ENST00000481708 DKK1O94907 266 aa4.79□□□□□ -1.64
SMC6-208ENST00000481708 PUS10Q3MIT2 529 aaKnown RBP4.79□□□□□ -1.64
SMC6-208ENST00000481708 LAPTM4BQ86VI4 370 aa4.79□□□□□ -1.64
SMC6-208ENST00000481708 SLF2Q8IX21 1173 aa4.79□□□□□ -1.64
SMC6-208ENST00000481708 ANO2Q9NQ90 1003 aa4.79□□□□□ -1.64
SMC6-208ENST00000481708 TBX22Q9Y458 520 aa4.79□□□□□ -1.64
SMC6-208ENST00000481708 RIPOR2Q9Y4F9 1068 aa4.79□□□□□ -1.64
SMC6-208ENST00000481708 BCL9O00512 1426 aa4.79□□□□□ -1.64
SMC6-208ENST00000481708 ADGRB1O14514 1584 aa4.79□□□□□ -1.64
SMC6-208ENST00000481708 PTK7Q13308 1070 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 WASHC4Q2M389 1173 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 SPACA7Q96KW9 195 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 LRRC37A3O60309 1634 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 C6orf229H3BNL8 230 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 HRO43593 1189 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 PARNO95453 639 aaKnown RBP4.78□□□□□ -1.64
SMC6-208ENST00000481708 ZNF211Q13398 564 aaPredicted RBP4.78□□□□□ -1.64
SMC6-208ENST00000481708 MTMR3Q13615 1198 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 TSC1Q92574 1164 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 ERCC3P19447 782 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 ATP6V1AP38606 617 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 TNNI2P48788 182 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 ARHGAP4P98171 946 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 PSME1Q06323 249 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 MORN1Q5T089 497 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 CC2D2BQ6DHV5 1058 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 ADGRD1Q6QNK2 874 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 ZNF526Q8TF50 670 aaPredicted RBP4.78□□□□□ -1.64
SMC6-208ENST00000481708 SLC27A5Q9Y2P5 690 aa4.78□□□□□ -1.64
SMC6-208ENST00000481708 NBPF3Q9H094 633 aa4.77□□□□□ -1.65
SMC6-208ENST00000481708 CANXP27824 592 aaKnown RBP4.77□□□□□ -1.65
SMC6-208ENST00000481708 PLEKHG1Q9ULL1 1385 aa4.77□□□□□ -1.65
SMC6-208ENST00000481708 ERCC5P28715 1186 aaPredicted RBP4.77□□□□□ -1.65
SMC6-208ENST00000481708 HDGFP51858 240 aaKnown RBP4.77□□□□□ -1.65
SMC6-208ENST00000481708 LSM11P83369 360 aaKnown RBP eCLIP4.77□□□□□ -1.65
SMC6-208ENST00000481708 TCEAL1Q15170 157 aa4.77□□□□□ -1.65
SMC6-208ENST00000481708 OCLNQ16625 522 aa4.77□□□□□ -1.65
SMC6-208ENST00000481708 EVI5LQ96CN4 794 aa4.77□□□□□ -1.65
SMC6-208ENST00000481708 ARID4BQ4LE39 1312 aaPredicted RBP4.77□□□□□ -1.65
SMC6-208ENST00000481708 USP17L3A6NCW0 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L4A6NCW7 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L15C9J2P7 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L10C9JJH3 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L13C9JLJ4 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L12C9JPN9 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L11C9JVI0 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L21D6R901 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L18D6R9N7 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L22D6RA61 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L17D6RBQ6 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L19D6RCP7 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L20D6RJB6 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 TK2O00142 265 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L24Q0WX57 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 CCDC144BQ3MJ40 725 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L2Q6R6M4 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 RNF19BQ6ZMZ0 732 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 USP17L1Q7RTZ2 530 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 ATRNO75882 1429 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 ARID4AP29374 1257 aaPredicted RBP4.76□□□□□ -1.65
SMC6-208ENST00000481708 NR6A1Q15406 480 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 BLOC1S3Q6QNY0 202 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 PIK3C2AO00443 1686 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 KCNH2Q12809 1159 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 NOL8Q76FK4 1167 aaKnown RBP4.76□□□□□ -1.65
SMC6-208ENST00000481708 JAZF1Q86VZ6 243 aa4.76□□□□□ -1.65
SMC6-208ENST00000481708 MRPL50Q8N5N7 158 aaKnown RBP4.76□□□□□ -1.65
SMC6-208ENST00000481708 HELBQ8NG08 1087 aaPredicted RBP4.76□□□□□ -1.65
SMC6-208ENST00000481708 LGR5O75473 907 aa4.75□□□□□ -1.65
SMC6-208ENST00000481708 WWC1Q8IX03 1113 aa4.75□□□□□ -1.65
SMC6-208ENST00000481708 CLP1Q92989 425 aaKnown RBP4.75□□□□□ -1.65
SMC6-208ENST00000481708 TAF1LQ8IZX4 1826 aa4.75□□□□□ -1.65
SMC6-208ENST00000481708 ACTN4O43707 911 aaKnown RBP4.75□□□□□ -1.65
SMC6-208ENST00000481708 CLDN10P78369 228 aa4.75□□□□□ -1.65
SMC6-208ENST00000481708 FAM163AQ96GL9 167 aaPredicted RBP4.75□□□□□ -1.65
SMC6-208ENST00000481708 PURBQ96QR8 312 aaKnown RBP4.75□□□□□ -1.65
SMC6-208ENST00000481708 APLP1P51693 650 aa4.75□□□□□ -1.65
SMC6-208ENST00000481708 ILDR2Q71H61 639 aa4.75□□□□□ -1.65
SMC6-208ENST00000481708 RPUSD2Q8IZ73 545 aaKnown RBP4.75□□□□□ -1.65
SMC6-208ENST00000481708 GAS2L2Q8NHY3 880 aa4.75□□□□□ -1.65
SMC6-208ENST00000481708 IQSEC3Q9UPP2 1182 aaPredicted RBP4.75□□□□□ -1.65
SMC6-208ENST00000481708 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.75□□□□□ -1.65
SMC6-208ENST00000481708 SLIT3O75094 1523 aa4.75□□□□□ -1.65
SMC6-208ENST00000481708 BCAMP50895 628 aa4.74□□□□□ -1.65
SMC6-208ENST00000481708 GRIPAP1Q4V328 841 aa4.74□□□□□ -1.65
SMC6-208ENST00000481708 LRCH3Q96II8 777 aa4.74□□□□□ -1.65
SMC6-208ENST00000481708 SETDB2Q96T68 719 aa4.74□□□□□ -1.65
SMC6-208ENST00000481708 RGS17Q9UGC6 210 aaPredicted RBP4.74□□□□□ -1.65
SMC6-208ENST00000481708 KIAA1024Q9UPX6 916 aa4.74□□□□□ -1.65
SMC6-208ENST00000481708 ABCC5O15440 1437 aa4.74□□□□□ -1.65
SMC6-208ENST00000481708 VPS8Q8N3P4 1428 aa4.74□□□□□ -1.65
SMC6-208ENST00000481708 P4HBP07237 508 aaKnown RBP4.74□□□□□ -1.65
SMC6-208ENST00000481708 TSGA10IPQ3SY00 556 aa4.74□□□□□ -1.65
SMC6-208ENST00000481708 SLFNL1Q499Z3 407 aa4.74□□□□□ -1.65
SMC6-208ENST00000481708 STAG1Q8WVM7 1258 aa4.74□□□□□ -1.65
SMC6-208ENST00000481708 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.74□□□□□ -1.65
SMC6-208ENST00000481708 PKD1L3Q7Z443 1732 aa4.74□□□□□ -1.65
SMC6-208ENST00000481708 TLDC2A0PJX2 215 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms