RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 ZKSCAN2Q63HK3 967 aa29.37■■■□□ 2.29
SHISA4-203ENST00000481699 ANKRD13DQ6ZTN6 518 aa29.37■■■□□ 2.29
SHISA4-203ENST00000481699 SMIM5Q71RC9 77 aa29.37■■■□□ 2.29
SHISA4-203ENST00000481699 API5Q9BZZ5 524 aaKnown RBP29.37■■■□□ 2.29
SHISA4-203ENST00000481699 CACNA1FO60840 1977 aa29.36■■■□□ 2.29
SHISA4-203ENST00000481699 ZBTB3Q9H5J0 574 aa29.36■■■□□ 2.29
SHISA4-203ENST00000481699 PLBD2Q8NHP8 589 aa29.35■■■□□ 2.29
SHISA4-203ENST00000481699 ARHGAP45Q92619 1136 aa29.35■■■□□ 2.29
SHISA4-203ENST00000481699 MAP3K15Q6ZN16 1313 aa29.35■■■□□ 2.29
SHISA4-203ENST00000481699 KSR2Q6VAB6 950 aa29.34■■■□□ 2.29
SHISA4-203ENST00000481699 AMIGO3Q86WK7 504 aa29.34■■■□□ 2.29
SHISA4-203ENST00000481699 ZNF652Q9Y2D9 606 aa29.34■■■□□ 2.29
SHISA4-203ENST00000481699 PI4KAP2A4QPH2 592 aa29.33■■■□□ 2.29
SHISA4-203ENST00000481699 PI4KAP1Q8N8J0 262 aa29.33■■■□□ 2.29
SHISA4-203ENST00000481699 NARFQ9UHQ1 456 aa29.33■■■□□ 2.29
SHISA4-203ENST00000481699 UBR3Q6ZT12 1888 aa29.33■■■□□ 2.29
SHISA4-203ENST00000481699 PNPLA7Q6ZV29 1317 aa29.32■■■□□ 2.28
SHISA4-203ENST00000481699 ERVV-1B6SEH8 477 aa29.32■■■□□ 2.28
SHISA4-203ENST00000481699 ATF7IPQ6VMQ6 1270 aa29.32■■■□□ 2.28
SHISA4-203ENST00000481699 MAP3K2Q9Y2U5 619 aa29.32■■■□□ 2.28
SHISA4-203ENST00000481699 MS4A1P11836 297 aa29.31■■■□□ 2.28
SHISA4-203ENST00000481699 COL23A1Q86Y22 540 aaPredicted RBP29.31■■■□□ 2.28
SHISA4-203ENST00000481699 FTSJ3Q8IY81 847 aaKnown RBP29.31■■■□□ 2.28
SHISA4-203ENST00000481699 SUPT16HQ9Y5B9 1047 aaKnown RBP29.31■■■□□ 2.28
SHISA4-203ENST00000481699 NEXNQ0ZGT2 675 aa29.3■■■□□ 2.28
SHISA4-203ENST00000481699 USPL1Q5W0Q7 1092 aa29.3■■■□□ 2.28
SHISA4-203ENST00000481699 SLC4A10Q6U841 1118 aa29.3■■■□□ 2.28
SHISA4-203ENST00000481699 DNAAF4Q8WXU2 420 aa29.3■■■□□ 2.28
SHISA4-203ENST00000481699 SRP68Q9UHB9 627 aaKnown RBP29.3■■■□□ 2.28
SHISA4-203ENST00000481699 USP42Q9H9J4 1324 aaKnown RBP29.29■■■□□ 2.28
SHISA4-203ENST00000481699 CAMTA2O94983 1202 aa29.29■■■□□ 2.28
SHISA4-203ENST00000481699 RRP1P56182 461 aaKnown RBP29.29■■■□□ 2.28
SHISA4-203ENST00000481699 HSP90AB3PQ58FF7 597 aa29.29■■■□□ 2.28
SHISA4-203ENST00000481699 F6X3S4 739 aa29.28■■■□□ 2.28
SHISA4-203ENST00000481699 PLIN1O60240 522 aa29.28■■■□□ 2.28
SHISA4-203ENST00000481699 ADCY9O60503 1353 aa29.27■■■□□ 2.28
SHISA4-203ENST00000481699 TRIM27P14373 513 aa29.27■■■□□ 2.28
SHISA4-203ENST00000481699 RGL2O15211 777 aa29.26■■■□□ 2.27
SHISA4-203ENST00000481699 CLEC4GQ6UXB4 293 aa29.26■■■□□ 2.27
SHISA4-203ENST00000481699 GIGYF2Q6Y7W6 1299 aaKnown RBP29.26■■■□□ 2.27
SHISA4-203ENST00000481699 CLUAP1Q96AJ1 413 aa29.26■■■□□ 2.27
SHISA4-203ENST00000481699 HLFQ16534 295 aa29.25■■■□□ 2.27
SHISA4-203ENST00000481699 DZIP1LQ8IYY4 767 aaKnown RBP29.25■■■□□ 2.27
SHISA4-203ENST00000481699 MYD88Q99836 296 aa29.25■■■□□ 2.27
SHISA4-203ENST00000481699 METTL22Q9BUU2 404 aaPredicted RBP29.25■■■□□ 2.27
SHISA4-203ENST00000481699 TUBGCP6Q96RT7 1819 aa29.24■■■□□ 2.27
SHISA4-203ENST00000481699 C4AP0C0L4 1744 aa29.23■■■□□ 2.27
SHISA4-203ENST00000481699 TCIRG1Q13488 830 aa29.23■■■□□ 2.27
SHISA4-203ENST00000481699 QSER1Q2KHR3 1735 aa29.23■■■□□ 2.27
SHISA4-203ENST00000481699 GYS1P13807 737 aa29.21■■■□□ 2.27
SHISA4-203ENST00000481699 CCT4P50991 539 aaKnown RBP29.21■■■□□ 2.27
SHISA4-203ENST00000481699 NLGN1Q8N2Q7 840 aa29.21■■■□□ 2.27
SHISA4-203ENST00000481699 SCN7AQ01118 1682 aa29.21■■■□□ 2.27
SHISA4-203ENST00000481699 BICDL1Q6ZP65 573 aa29.2■■■□□ 2.26
SHISA4-203ENST00000481699 SLC16A10Q8TF71 515 aa29.2■■■□□ 2.26
SHISA4-203ENST00000481699 SRCIN1Q9C0H9 1055 aa29.2■■■□□ 2.26
SHISA4-203ENST00000481699 TNNQ9UQP3 1299 aa29.2■■■□□ 2.26
SHISA4-203ENST00000481699 NIP7Q9Y221 180 aaKnown RBP eCLIP29.2■■■□□ 2.26
SHISA4-203ENST00000481699 ABCC4O15439 1325 aa29.2■■■□□ 2.26
SHISA4-203ENST00000481699 BCORQ6W2J9 1755 aa29.19■■■□□ 2.26
SHISA4-203ENST00000481699 ARFGEF2Q9Y6D5 1785 aa29.19■■■□□ 2.26
SHISA4-203ENST00000481699 PXDNLA1KZ92 1463 aa29.19■■■□□ 2.26
SHISA4-203ENST00000481699 ATP5J2-PTCD1G3V325 749 aa29.19■■■□□ 2.26
SHISA4-203ENST00000481699 GPTP24298 496 aa29.19■■■□□ 2.26
SHISA4-203ENST00000481699 FKBP8Q14318 412 aa29.19■■■□□ 2.26
SHISA4-203ENST00000481699 PDE3AQ14432 1141 aa29.19■■■□□ 2.26
SHISA4-203ENST00000481699 LINS1Q8NG48 757 aa29.19■■■□□ 2.26
SHISA4-203ENST00000481699 BCL2L12Q9HB09 334 aa29.19■■■□□ 2.26
SHISA4-203ENST00000481699 PANK1Q8TE04 598 aa29.18■■■□□ 2.26
SHISA4-203ENST00000481699 SETDB2Q96T68 719 aa29.18■■■□□ 2.26
SHISA4-203ENST00000481699 RNF123Q5XPI4 1314 aa29.18■■■□□ 2.26
SHISA4-203ENST00000481699 BEND3Q5T5X7 828 aa29.17■■■□□ 2.26
SHISA4-203ENST00000481699 TBC1D9BQ66K14 1250 aa29.17■■■□□ 2.26
SHISA4-203ENST00000481699 ATP10DQ9P241 1426 aa29.17■■■□□ 2.26
SHISA4-203ENST00000481699 PARP10Q53GL7 1025 aa29.16■■■□□ 2.26
SHISA4-203ENST00000481699 MSL1Q68DK7 614 aa29.16■■■□□ 2.26
SHISA4-203ENST00000481699 ITPRIPQ8IWB1 547 aa29.16■■■□□ 2.26
SHISA4-203ENST00000481699 ALDH1L1O75891 902 aa29.15■■■□□ 2.26
SHISA4-203ENST00000481699 YY1P25490 414 aa29.15■■■□□ 2.26
SHISA4-203ENST00000481699 ZNF34Q8IZ26 560 aa29.15■■■□□ 2.26
SHISA4-203ENST00000481699 TMEM57Q8N5G2 664 aa29.15■■■□□ 2.26
SHISA4-203ENST00000481699 ISCA1Q9BUE6 129 aa29.15■■■□□ 2.26
SHISA4-203ENST00000481699 CWC25Q9NXE8 425 aaPredicted RBP29.15■■■□□ 2.26
SHISA4-203ENST00000481699 NEURL1BA8MQ27 555 aa29.14■■■□□ 2.26
SHISA4-203ENST00000481699 CWF19L2Q2TBE0 894 aaKnown RBP29.14■■■□□ 2.26
SHISA4-203ENST00000481699 INTS3Q68E01 1043 aaKnown RBP29.14■■■□□ 2.26
SHISA4-203ENST00000481699 CCDC191Q8NCU4 936 aa29.14■■■□□ 2.26
SHISA4-203ENST00000481699 PDGFDQ9GZP0 370 aaPredicted RBP29.14■■■□□ 2.26
SHISA4-203ENST00000481699 NPHP1O15259 732 aa29.13■■■□□ 2.25
SHISA4-203ENST00000481699 IGKV5-2P06315 115 aa29.13■■■□□ 2.25
SHISA4-203ENST00000481699 RLBP1P12271 317 aa29.13■■■□□ 2.25
SHISA4-203ENST00000481699 TRIM28Q13263 835 aaKnown RBP29.13■■■□□ 2.25
SHISA4-203ENST00000481699 PPP1R42Q7Z4L9 355 aa29.13■■■□□ 2.25
SHISA4-203ENST00000481699 NFIXQ14938 502 aa29.12■■■□□ 2.25
SHISA4-203ENST00000481699 C20orf194Q5TEA3 1177 aa29.12■■■□□ 2.25
SHISA4-203ENST00000481699 NLRP10Q86W26 655 aa29.12■■■□□ 2.25
SHISA4-203ENST00000481699 NUP98P52948 1817 aa29.12■■■□□ 2.25
SHISA4-203ENST00000481699 FAM177BA6PVY3 158 aa29.11■■■□□ 2.25
SHISA4-203ENST00000481699 C9orf78Q9NZ63 289 aaPredicted RBP29.11■■■□□ 2.25
SHISA4-203ENST00000481699 COG6Q9Y2V7 657 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms