RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 CALD1Q05682 793 aaKnown RBP17.01■□□□□ 0.31
HDAC1-207ENST00000481281 MBIPQ9NS73 344 aa17.01■□□□□ 0.31
HDAC1-207ENST00000481281 IFT57Q9NWB7 429 aa17.01■□□□□ 0.31
HDAC1-207ENST00000481281 PIM2Q9P1W9 311 aa17.01■□□□□ 0.31
HDAC1-207ENST00000481281 BCS1LQ9Y276 419 aa17.01■□□□□ 0.31
HDAC1-207ENST00000481281 ATP10DQ9P241 1426 aa17.01■□□□□ 0.31
HDAC1-207ENST00000481281 MAP3K15Q6ZN16 1313 aa17■□□□□ 0.31
HDAC1-207ENST00000481281 ERVV-1B6SEH8 477 aa17■□□□□ 0.31
HDAC1-207ENST00000481281 HOXB7P09629 217 aa17■□□□□ 0.31
HDAC1-207ENST00000481281 HLFQ16534 295 aa17■□□□□ 0.31
HDAC1-207ENST00000481281 CCDC27Q2M243 656 aa17■□□□□ 0.31
HDAC1-207ENST00000481281 TTLL7Q6ZT98 887 aa17■□□□□ 0.31
HDAC1-207ENST00000481281 EIF2S2P20042 333 aaKnown RBP16.99■□□□□ 0.31
HDAC1-207ENST00000481281 GNAI1P63096 354 aa16.99■□□□□ 0.31
HDAC1-207ENST00000481281 NCBP3Q53F19 620 aaKnown RBP16.99■□□□□ 0.31
HDAC1-207ENST00000481281 NGEFQ8N5V2 710 aa16.99■□□□□ 0.31
HDAC1-207ENST00000481281 CNBD1Q8NA66 436 aa16.99■□□□□ 0.31
HDAC1-207ENST00000481281 PROSER3Q2NL68 480 aa16.98■□□□□ 0.31
HDAC1-207ENST00000481281 DALRD3Q5D0E6 543 aaKnown RBP16.98■□□□□ 0.31
HDAC1-207ENST00000481281 KIF6Q6ZMV9 814 aa16.98■□□□□ 0.31
HDAC1-207ENST00000481281 ZNF784Q8NCA9 323 aaPredicted RBP16.98■□□□□ 0.31
HDAC1-207ENST00000481281 BRIP1Q9BX63 1249 aa16.98■□□□□ 0.31
HDAC1-207ENST00000481281 NIP7Q9Y221 180 aaKnown RBP eCLIP16.98■□□□□ 0.31
HDAC1-207ENST00000481281 ADCY9O60503 1353 aa16.98■□□□□ 0.31
HDAC1-207ENST00000481281 ANKRD36CQ5JPF3 1778 aa16.97■□□□□ 0.31
HDAC1-207ENST00000481281 NBPF5PQ86XG9 351 aaPredicted RBP16.97■□□□□ 0.31
HDAC1-207ENST00000481281 PDZRN3Q9UPQ7 1066 aa16.97■□□□□ 0.31
HDAC1-207ENST00000481281 ARFGEF2Q9Y6D5 1785 aa16.97■□□□□ 0.31
HDAC1-207ENST00000481281 ANXA1P04083 346 aa16.96■□□□□ 0.31
HDAC1-207ENST00000481281 PDE6BP35913 854 aa16.96■□□□□ 0.31
HDAC1-207ENST00000481281 ST5P78524 1137 aa16.96■□□□□ 0.31
HDAC1-207ENST00000481281 C2CD5Q86YS7 1000 aa16.96■□□□□ 0.31
HDAC1-207ENST00000481281 WWC1Q8IX03 1113 aa16.96■□□□□ 0.31
HDAC1-207ENST00000481281 CCDC24Q8N4L8 307 aa16.96■□□□□ 0.31
HDAC1-207ENST00000481281 ZBTB3Q9H5J0 574 aa16.96■□□□□ 0.31
HDAC1-207ENST00000481281 DDX21Q9NR30 783 aaKnown RBP eCLIP16.96■□□□□ 0.31
HDAC1-207ENST00000481281 IBTKQ9P2D0 1353 aaPredicted RBP16.95■□□□□ 0.3
HDAC1-207ENST00000481281 H0YIN7 160 aa16.95■□□□□ 0.3
HDAC1-207ENST00000481281 HDGFL1Q5TGJ6 251 aa16.95■□□□□ 0.3
HDAC1-207ENST00000481281 DUSP27Q5VZP5 1158 aa16.95■□□□□ 0.3
HDAC1-207ENST00000481281 GIGYF2Q6Y7W6 1299 aaKnown RBP16.95■□□□□ 0.3
HDAC1-207ENST00000481281 NECTIN2Q92692 538 aa16.95■□□□□ 0.3
HDAC1-207ENST00000481281 NPHP1O15259 732 aa16.94■□□□□ 0.3
HDAC1-207ENST00000481281 TPTE2Q6XPS3 522 aa16.94■□□□□ 0.3
HDAC1-207ENST00000481281 CHPF2Q9P2E5 772 aa16.94■□□□□ 0.3
HDAC1-207ENST00000481281 TNRC6CQ9HCJ0 1690 aaKnown RBP16.94■□□□□ 0.3
HDAC1-207ENST00000481281 UBN2Q6ZU65 1347 aa16.94■□□□□ 0.3
HDAC1-207ENST00000481281 CACNA1SQ13698 1873 aa16.93■□□□□ 0.3
HDAC1-207ENST00000481281 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
HDAC1-207ENST00000481281 ZNF34Q8IZ26 560 aa16.93■□□□□ 0.3
HDAC1-207ENST00000481281 TTLL6Q8N841 843 aa16.93■□□□□ 0.3
HDAC1-207ENST00000481281 IL16Q14005 1332 aa16.93■□□□□ 0.3
HDAC1-207ENST00000481281 KLRG2A4D1S0 409 aaPredicted RBP16.92■□□□□ 0.3
HDAC1-207ENST00000481281 ARHGAP27Q6ZUM4 889 aa16.92■□□□□ 0.3
HDAC1-207ENST00000481281 COPS6Q7L5N1 327 aa16.92■□□□□ 0.3
HDAC1-207ENST00000481281 XAGE3Q8WTP9 111 aa16.92■□□□□ 0.3
HDAC1-207ENST00000481281 DBF4Q9UBU7 674 aaPredicted RBP16.92■□□□□ 0.3
HDAC1-207ENST00000481281 RIC1Q4ADV7 1423 aa16.92■□□□□ 0.3
HDAC1-207ENST00000481281 SBF1O95248 1867 aa16.92■□□□□ 0.3
HDAC1-207ENST00000481281 ABCC12Q96J65 1359 aa16.91■□□□□ 0.3
HDAC1-207ENST00000481281 SRGNP10124 158 aa16.91■□□□□ 0.3
HDAC1-207ENST00000481281 GPTP24298 496 aa16.91■□□□□ 0.3
HDAC1-207ENST00000481281 FAM9BQ8IZU0 186 aa16.91■□□□□ 0.3
HDAC1-207ENST00000481281 NYXQ9GZU5 481 aa16.91■□□□□ 0.3
HDAC1-207ENST00000481281 FAM177BA6PVY3 158 aa16.9■□□□□ 0.3
HDAC1-207ENST00000481281 STYK1Q6J9G0 422 aa16.9■□□□□ 0.3
HDAC1-207ENST00000481281 C8orf58Q8NAV2 365 aa16.9■□□□□ 0.3
HDAC1-207ENST00000481281 TSR2Q969E8 191 aaKnown RBP16.9■□□□□ 0.3
HDAC1-207ENST00000481281 SLX4Q8IY92 1834 aa16.9■□□□□ 0.3
HDAC1-207ENST00000481281 FER1L6Q2WGJ9 1857 aa16.89■□□□□ 0.29
HDAC1-207ENST00000481281 NTSR2O95665 410 aa16.89■□□□□ 0.29
HDAC1-207ENST00000481281 AIMP1Q12904 312 aaKnown RBP16.89■□□□□ 0.29
HDAC1-207ENST00000481281 PARP10Q53GL7 1025 aa16.89■□□□□ 0.29
HDAC1-207ENST00000481281 SUSD4Q5VX71 490 aa16.89■□□□□ 0.29
HDAC1-207ENST00000481281 HYPKQ9NX55 129 aa16.89■□□□□ 0.29
HDAC1-207ENST00000481281 ELL2O00472 640 aaPredicted RBP16.88■□□□□ 0.29
HDAC1-207ENST00000481281 HSP90AB3PQ58FF7 597 aa16.88■□□□□ 0.29
HDAC1-207ENST00000481281 NUTM1Q86Y26 1132 aa16.88■□□□□ 0.29
HDAC1-207ENST00000481281 WDR63Q8IWG1 891 aa16.88■□□□□ 0.29
HDAC1-207ENST00000481281 ZNF622Q969S3 477 aaKnown RBP eCLIP16.88■□□□□ 0.296e-16■□□□□ 9.3
HDAC1-207ENST00000481281 MASTLQ96GX5 879 aa16.88■□□□□ 0.29
HDAC1-207ENST00000481281 NPR1P16066 1061 aa16.87■□□□□ 0.29
HDAC1-207ENST00000481281 GTF2E1P29083 439 aaPredicted RBP16.87■□□□□ 0.29
HDAC1-207ENST00000481281 CRY2Q49AN0 593 aa16.87■□□□□ 0.29
HDAC1-207ENST00000481281 ERFEQ4G0M1 354 aa16.87■□□□□ 0.29
HDAC1-207ENST00000481281 TSPYL6Q8N831 410 aa16.87■□□□□ 0.29
HDAC1-207ENST00000481281 PLBD2Q8NHP8 589 aa16.87■□□□□ 0.29
HDAC1-207ENST00000481281 CNKSR1Q969H4 720 aa16.87■□□□□ 0.29
HDAC1-207ENST00000481281 TCIRG1Q13488 830 aa16.86■□□□□ 0.29
HDAC1-207ENST00000481281 PRPF40BQ6NWY9 871 aaKnown RBP16.86■□□□□ 0.29
HDAC1-207ENST00000481281 PPP1R42Q7Z4L9 355 aa16.86■□□□□ 0.29
HDAC1-207ENST00000481281 CHMP4AQ9BY43 222 aa16.86■□□□□ 0.29
HDAC1-207ENST00000481281 RNF123Q5XPI4 1314 aa16.86■□□□□ 0.29
HDAC1-207ENST00000481281 FANCIQ9NVI1 1328 aa16.86■□□□□ 0.29
HDAC1-207ENST00000481281 LAMB2P55268 1798 aa16.85■□□□□ 0.29
HDAC1-207ENST00000481281 CCDC88AQ3V6T2 1871 aa16.85■□□□□ 0.29
HDAC1-207ENST00000481281 ANKRD13DQ6ZTN6 518 aa16.85■□□□□ 0.29
HDAC1-207ENST00000481281 NLRP10Q86W26 655 aa16.85■□□□□ 0.29
HDAC1-207ENST00000481281 SALL2Q9Y467 1007 aaPredicted RBP16.85■□□□□ 0.29
HDAC1-207ENST00000481281 NFKBIEO00221 500 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms