RNA–Protein interactions for RNA: ENST00000480785.5

HLA-DMA-209, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-209ENST00000480785 PDIA6Q15084 440 aa17.4■□□□□ 0.38
HLA-DMA-209ENST00000480785 KRT24Q2M2I5 525 aa17.4■□□□□ 0.38
HLA-DMA-209ENST00000480785 TBC1D9BQ66K14 1250 aa17.4■□□□□ 0.38
HLA-DMA-209ENST00000480785 WWC1Q8IX03 1113 aa17.4■□□□□ 0.38
HLA-DMA-209ENST00000480785 LAS1LQ9Y4W2 734 aaKnown RBP17.4■□□□□ 0.38
HLA-DMA-209ENST00000480785 SERPINB2P05120 415 aa17.39■□□□□ 0.37
HLA-DMA-209ENST00000480785 IL16Q14005 1332 aa17.39■□□□□ 0.37
HLA-DMA-209ENST00000480785 ERVV-1B6SEH8 477 aa17.38■□□□□ 0.37
HLA-DMA-209ENST00000480785 NGEFQ8N5V2 710 aa17.38■□□□□ 0.37
HLA-DMA-209ENST00000480785 ZNF526Q8TF50 670 aaPredicted RBP17.38■□□□□ 0.37
HLA-DMA-209ENST00000480785 CARMIL3Q8ND23 1372 aa17.38■□□□□ 0.37
HLA-DMA-209ENST00000480785 CCER2I3L3R5 266 aa17.37■□□□□ 0.37
HLA-DMA-209ENST00000480785 EIF2S2P20042 333 aaKnown RBP17.37■□□□□ 0.37
HLA-DMA-209ENST00000480785 FAM9BQ8IZU0 186 aa17.37■□□□□ 0.37
HLA-DMA-209ENST00000480785 ZNF652Q9Y2D9 606 aa17.37■□□□□ 0.37
HLA-DMA-209ENST00000480785 MAP3K15Q6ZN16 1313 aa17.37■□□□□ 0.37
HLA-DMA-209ENST00000480785 KCNA3P22001 575 aa17.36■□□□□ 0.37
HLA-DMA-209ENST00000480785 DUSP27Q5VZP5 1158 aa17.36■□□□□ 0.37
HLA-DMA-209ENST00000480785 TTLL7Q6ZT98 887 aa17.36■□□□□ 0.37
HLA-DMA-209ENST00000480785 DDX21Q9NR30 783 aaKnown RBP eCLIP17.36■□□□□ 0.37
HLA-DMA-209ENST00000480785 COL11A2P13942 1736 aaPredicted RBP17.35■□□□□ 0.37
HLA-DMA-209ENST00000480785 ARFGEF2Q9Y6D5 1785 aa17.35■□□□□ 0.37
HLA-DMA-209ENST00000480785 KIF3CO14782 793 aa17.35■□□□□ 0.37
HLA-DMA-209ENST00000480785 MYL6BP14649 208 aa17.35■□□□□ 0.37
HLA-DMA-209ENST00000480785 DPEP1P16444 411 aa17.35■□□□□ 0.37
HLA-DMA-209ENST00000480785 PROSER3Q2NL68 480 aa17.35■□□□□ 0.37
HLA-DMA-209ENST00000480785 BICDL1Q6ZP65 573 aa17.35■□□□□ 0.37
HLA-DMA-209ENST00000480785 SETDB2Q96T68 719 aa17.35■□□□□ 0.37
HLA-DMA-209ENST00000480785 A0A0G2JLW4 131 aa17.34■□□□□ 0.37
HLA-DMA-209ENST00000480785 HLFQ16534 295 aa17.34■□□□□ 0.37
HLA-DMA-209ENST00000480785 WDR63Q8IWG1 891 aa17.34■□□□□ 0.37
HLA-DMA-209ENST00000480785 CACNA1SQ13698 1873 aa17.33■□□□□ 0.37
HLA-DMA-209ENST00000480785 HSPA6P17066 643 aa17.33■□□□□ 0.36
HLA-DMA-209ENST00000480785 HDGFL1Q5TGJ6 251 aa17.33■□□□□ 0.36
HLA-DMA-209ENST00000480785 PRR5LQ6MZQ0 368 aa17.33■□□□□ 0.36
HLA-DMA-209ENST00000480785 KIF6Q6ZMV9 814 aa17.33■□□□□ 0.36
HLA-DMA-209ENST00000480785 SBF1O95248 1867 aa17.33■□□□□ 0.36
HLA-DMA-209ENST00000480785 ANXA1P04083 346 aa17.32■□□□□ 0.36
HLA-DMA-209ENST00000480785 GIGYF2Q6Y7W6 1299 aaKnown RBP17.32■□□□□ 0.36
HLA-DMA-209ENST00000480785 C8orf58Q8NAV2 365 aa17.32■□□□□ 0.36
HLA-DMA-209ENST00000480785 PDZRN3Q9UPQ7 1066 aa17.32■□□□□ 0.36
HLA-DMA-209ENST00000480785 IBTKQ9P2D0 1353 aaPredicted RBP17.31■□□□□ 0.36
HLA-DMA-209ENST00000480785 NECTIN2Q92692 538 aa17.31■□□□□ 0.36
HLA-DMA-209ENST00000480785 BRIP1Q9BX63 1249 aa17.31■□□□□ 0.36
HLA-DMA-209ENST00000480785 CHPF2Q9P2E5 772 aa17.31■□□□□ 0.36
HLA-DMA-209ENST00000480785 DBF4Q9UBU7 674 aaPredicted RBP17.31■□□□□ 0.36
HLA-DMA-209ENST00000480785 NIP7Q9Y221 180 aaKnown RBP eCLIP17.31■□□□□ 0.36
HLA-DMA-209ENST00000480785 BCS1LQ9Y276 419 aa17.31■□□□□ 0.36
HLA-DMA-209ENST00000480785 CCDC88AQ3V6T2 1871 aa17.31■□□□□ 0.36
HLA-DMA-209ENST00000480785 ZNF521Q96K83 1311 aa17.3■□□□□ 0.36
HLA-DMA-209ENST00000480785 ZNF34Q8IZ26 560 aa17.3■□□□□ 0.36
HLA-DMA-209ENST00000480785 CNBD1Q8NA66 436 aa17.3■□□□□ 0.36
HLA-DMA-209ENST00000480785 PIM2Q9P1W9 311 aa17.3■□□□□ 0.36
HLA-DMA-209ENST00000480785 CHRNA5P30532 468 aa17.29■□□□□ 0.36
HLA-DMA-209ENST00000480785 COPS6Q7L5N1 327 aa17.29■□□□□ 0.36
HLA-DMA-209ENST00000480785 TSPYL6Q8N831 410 aa17.29■□□□□ 0.36
HLA-DMA-209ENST00000480785 XAGE3Q8WTP9 111 aa17.29■□□□□ 0.36
HLA-DMA-209ENST00000480785 TSR2Q969E8 191 aaKnown RBP17.29■□□□□ 0.36
HLA-DMA-209ENST00000480785 CHMP4AQ9BY43 222 aa17.29■□□□□ 0.36
HLA-DMA-209ENST00000480785 ZBTB3Q9H5J0 574 aa17.29■□□□□ 0.36
HLA-DMA-209ENST00000480785 SLX4Q8IY92 1834 aa17.28■□□□□ 0.36
HLA-DMA-209ENST00000480785 DIEXFQ68CQ4 756 aaKnown RBP17.28■□□□□ 0.36
HLA-DMA-209ENST00000480785 TPTE2Q6XPS3 522 aa17.28■□□□□ 0.36
HLA-DMA-209ENST00000480785 NBPF5PQ86XG9 351 aaPredicted RBP17.28■□□□□ 0.36
HLA-DMA-209ENST00000480785 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
HLA-DMA-209ENST00000480785 RIC1Q4ADV7 1423 aa17.28■□□□□ 0.36
HLA-DMA-209ENST00000480785 LAMB2P55268 1798 aa17.28■□□□□ 0.36
HLA-DMA-209ENST00000480785 UBN2Q6ZU65 1347 aa17.27■□□□□ 0.36
HLA-DMA-209ENST00000480785 FANCIQ9NVI1 1328 aa17.27■□□□□ 0.36
HLA-DMA-209ENST00000480785 FER1L6Q2WGJ9 1857 aa17.27■□□□□ 0.36
HLA-DMA-209ENST00000480785 TNRC6CQ9HCJ0 1690 aaKnown RBP17.27■□□□□ 0.36
HLA-DMA-209ENST00000480785 PDE6BP35913 854 aa17.27■□□□□ 0.36
HLA-DMA-209ENST00000480785 ST5P78524 1137 aa17.27■□□□□ 0.36
HLA-DMA-209ENST00000480785 SALL2Q9Y467 1007 aaPredicted RBP17.27■□□□□ 0.36
HLA-DMA-209ENST00000480785 KLRG2A4D1S0 409 aaPredicted RBP17.26■□□□□ 0.35
HLA-DMA-209ENST00000480785 H0YIN7 160 aa17.26■□□□□ 0.35
HLA-DMA-209ENST00000480785 ELL2O00472 640 aaPredicted RBP17.26■□□□□ 0.35
HLA-DMA-209ENST00000480785 IFFO2Q5TF58 517 aa17.26■□□□□ 0.35
HLA-DMA-209ENST00000480785 ARHGAP27Q6ZUM4 889 aa17.26■□□□□ 0.35
HLA-DMA-209ENST00000480785 PLBD2Q8NHP8 589 aa17.26■□□□□ 0.35
HLA-DMA-209ENST00000480785 NYXQ9GZU5 481 aa17.26■□□□□ 0.35
HLA-DMA-209ENST00000480785 DICER1Q9UPY3 1922 aaKnown RBP17.25■□□□□ 0.35
HLA-DMA-209ENST00000480785 PARP10Q53GL7 1025 aa17.25■□□□□ 0.35
HLA-DMA-209ENST00000480785 HSP90AB3PQ58FF7 597 aa17.25■□□□□ 0.35
HLA-DMA-209ENST00000480785 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
HLA-DMA-209ENST00000480785 CCDC30Q5VVM6 783 aa17.25■□□□□ 0.35
HLA-DMA-209ENST00000480785 C2CD5Q86YS7 1000 aa17.25■□□□□ 0.35
HLA-DMA-209ENST00000480785 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
HLA-DMA-209ENST00000480785 AIMP1Q12904 312 aaKnown RBP17.24■□□□□ 0.35
HLA-DMA-209ENST00000480785 TCIRG1Q13488 830 aa17.24■□□□□ 0.35
HLA-DMA-209ENST00000480785 TWISTNBQ3B726 338 aaPredicted RBP17.24■□□□□ 0.35
HLA-DMA-209ENST00000480785 ANKRD13DQ6ZTN6 518 aa17.24■□□□□ 0.35
HLA-DMA-209ENST00000480785 CCDC24Q8N4L8 307 aa17.24■□□□□ 0.35
HLA-DMA-209ENST00000480785 NPHP1O15259 732 aa17.23■□□□□ 0.35
HLA-DMA-209ENST00000480785 NTSR2O95665 410 aa17.23■□□□□ 0.35
HLA-DMA-209ENST00000480785 SRGNP10124 158 aa17.23■□□□□ 0.35
HLA-DMA-209ENST00000480785 GPTP24298 496 aa17.23■□□□□ 0.35
HLA-DMA-209ENST00000480785 SUSD4Q5VX71 490 aa17.23■□□□□ 0.35
HLA-DMA-209ENST00000480785 NMRK2Q9NPI5 230 aa17.23■□□□□ 0.35
HLA-DMA-209ENST00000480785 DDX60Q8IY21 1712 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms