RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 NLGN2Q8NFZ4 835 aa15.64■□□□□ 0.09
CCM2-212ENST00000480382 SPINK5Q9NQ38 1064 aaPredicted RBP15.64■□□□□ 0.09
CCM2-212ENST00000480382 CHPF2Q9P2E5 772 aa15.64■□□□□ 0.09
CCM2-212ENST00000480382 TTLL7Q6ZT98 887 aa15.63■□□□□ 0.09
CCM2-212ENST00000480382 TSPYL6Q8N831 410 aa15.63■□□□□ 0.09
CCM2-212ENST00000480382 ARFGEF2Q9Y6D5 1785 aa15.62■□□□□ 0.09
CCM2-212ENST00000480382 KIF6Q6ZMV9 814 aa15.62■□□□□ 0.09
CCM2-212ENST00000480382 DDX21Q9NR30 783 aaKnown RBP eCLIP15.62■□□□□ 0.09
CCM2-212ENST00000480382 ANKRD31Q8N7Z5 1873 aa15.62■□□□□ 0.09
CCM2-212ENST00000480382 CARMIL3Q8ND23 1372 aa15.62■□□□□ 0.09
CCM2-212ENST00000480382 HLFQ16534 295 aa15.61■□□□□ 0.09
CCM2-212ENST00000480382 ZBTB3Q9H5J0 574 aa15.61■□□□□ 0.09
CCM2-212ENST00000480382 ZNF652Q9Y2D9 606 aa15.61■□□□□ 0.09
CCM2-212ENST00000480382 CD2APQ9Y5K6 639 aa15.61■□□□□ 0.09
CCM2-212ENST00000480382 MAP3K15Q6ZN16 1313 aa15.61■□□□□ 0.09
CCM2-212ENST00000480382 BRCA1P38398 1863 aaKnown RBP15.61■□□□□ 0.09
CCM2-212ENST00000480382 PXDNLA1KZ92 1463 aa15.6■□□□□ 0.09
CCM2-212ENST00000480382 MYH16Q9H6N6 1097 aa15.6■□□□□ 0.09
CCM2-212ENST00000480382 DBF4Q9UBU7 674 aaPredicted RBP15.6■□□□□ 0.09
CCM2-212ENST00000480382 DLEC1Q9Y238 1755 aa15.59■□□□□ 0.09
CCM2-212ENST00000480382 SERPINB2P05120 415 aa15.59■□□□□ 0.09
CCM2-212ENST00000480382 GOLGA2Q08379 1002 aa15.59■□□□□ 0.09
CCM2-212ENST00000480382 AIMP1Q12904 312 aaKnown RBP15.59■□□□□ 0.09
CCM2-212ENST00000480382 TWISTNBQ3B726 338 aaPredicted RBP15.59■□□□□ 0.09
CCM2-212ENST00000480382 CLEC4GQ6UXB4 293 aa15.59■□□□□ 0.09
CCM2-212ENST00000480382 XAGE3Q8WTP9 111 aa15.59■□□□□ 0.09
CCM2-212ENST00000480382 COL11A2P13942 1736 aaPredicted RBP15.59■□□□□ 0.09
CCM2-212ENST00000480382 ATP10DQ9P241 1426 aa15.59■□□□□ 0.09
CCM2-212ENST00000480382 ERVV-1B6SEH8 477 aa15.58■□□□□ 0.08
CCM2-212ENST00000480382 RGL2O15211 777 aa15.58■□□□□ 0.08
CCM2-212ENST00000480382 EXOSC9Q06265 439 aaKnown RBP15.58■□□□□ 0.08
CCM2-212ENST00000480382 COPS6Q7L5N1 327 aa15.58■□□□□ 0.08
CCM2-212ENST00000480382 SETDB2Q96T68 719 aa15.58■□□□□ 0.08
CCM2-212ENST00000480382 UTRNP46939 3433 aa15.57■□□□□ 0.08
CCM2-212ENST00000480382 CCDC30Q5VVM6 783 aa15.57■□□□□ 0.08
CCM2-212ENST00000480382 NIP7Q9Y221 180 aaKnown RBP eCLIP15.57■□□□□ 0.08
CCM2-212ENST00000480382 CACNA1FO60840 1977 aa15.56■□□□□ 0.08
CCM2-212ENST00000480382 TCERG1O14776 1098 aaKnown RBP15.56■□□□□ 0.08
CCM2-212ENST00000480382 GIGYF2Q6Y7W6 1299 aaKnown RBP15.56■□□□□ 0.08
CCM2-212ENST00000480382 HYPKQ9NX55 129 aa15.56■□□□□ 0.08
CCM2-212ENST00000480382 TNRC6CQ9HCJ0 1690 aaKnown RBP15.56■□□□□ 0.08
CCM2-212ENST00000480382 UBN2Q6ZU65 1347 aa15.55■□□□□ 0.08
CCM2-212ENST00000480382 FAM177BA6PVY3 158 aa15.55■□□□□ 0.08
CCM2-212ENST00000480382 E9PSI1 815 aa15.55■□□□□ 0.08
CCM2-212ENST00000480382 PRR5LQ6MZQ0 368 aa15.55■□□□□ 0.08
CCM2-212ENST00000480382 CCDC24Q8N4L8 307 aa15.55■□□□□ 0.08
CCM2-212ENST00000480382 CNBD1Q8NA66 436 aa15.55■□□□□ 0.08
CCM2-212ENST00000480382 PHAXQ9H814 394 aaKnown RBP15.55■□□□□ 0.08
CCM2-212ENST00000480382 WWC3Q9ULE0 1092 aa15.55■□□□□ 0.08
CCM2-212ENST00000480382 CACNA1SQ13698 1873 aa15.54■□□□□ 0.08
CCM2-212ENST00000480382 NPHP1O15259 732 aa15.54■□□□□ 0.08
CCM2-212ENST00000480382 GPTP24298 496 aa15.54■□□□□ 0.08
CCM2-212ENST00000480382 NBPF5PQ86XG9 351 aaPredicted RBP15.54■□□□□ 0.08
CCM2-212ENST00000480382 PELP1Q8IZL8 1130 aaKnown RBP15.54■□□□□ 0.08
CCM2-212ENST00000480382 CDCA7LQ96GN5 454 aa15.54■□□□□ 0.08
CCM2-212ENST00000480382 CHMP4AQ9BY43 222 aa15.54■□□□□ 0.08
CCM2-212ENST00000480382 A0A0G2JLW4 131 aa15.53■□□□□ 0.08
CCM2-212ENST00000480382 VAMP4O75379 141 aa15.53■□□□□ 0.08
CCM2-212ENST00000480382 DPEP1P16444 411 aa15.53■□□□□ 0.08
CCM2-212ENST00000480382 TGFB2P61812 414 aa15.53■□□□□ 0.08
CCM2-212ENST00000480382 HNRNPUQ00839 825 aaKnown RBP eCLIP15.53■□□□□ 0.08
CCM2-212ENST00000480382 SLFN5Q08AF3 891 aa15.53■□□□□ 0.08
CCM2-212ENST00000480382 STK31Q9BXU1 1019 aa15.53■□□□□ 0.08
CCM2-212ENST00000480382 ARFGEF1Q9Y6D6 1849 aa15.52■□□□□ 0.08
CCM2-212ENST00000480382 CHRNA5P30532 468 aa15.52■□□□□ 0.08
CCM2-212ENST00000480382 ST5P78524 1137 aa15.52■□□□□ 0.08
CCM2-212ENST00000480382 ZNF34Q8IZ26 560 aa15.52■□□□□ 0.08
CCM2-212ENST00000480382 PLBD2Q8NHP8 589 aa15.52■□□□□ 0.08
CCM2-212ENST00000480382 ABCC12Q96J65 1359 aa15.51■□□□□ 0.07
CCM2-212ENST00000480382 IBTKQ9P2D0 1353 aaPredicted RBP15.51■□□□□ 0.07
CCM2-212ENST00000480382 DCAF8L1A6NGE4 600 aa15.51■□□□□ 0.07
CCM2-212ENST00000480382 YBX3P16989 372 aaKnown RBP eCLIP15.51■□□□□ 0.07
CCM2-212ENST00000480382 GPR162Q16538 588 aa15.51■□□□□ 0.07
CCM2-212ENST00000480382 ANKRD13DQ6ZTN6 518 aa15.51■□□□□ 0.07
CCM2-212ENST00000480382 LAMB2P55268 1798 aa15.5■□□□□ 0.07
CCM2-212ENST00000480382 SLC4A2P04920 1241 aa15.5■□□□□ 0.07
CCM2-212ENST00000480382 KCNA3P22001 575 aa15.5■□□□□ 0.07
CCM2-212ENST00000480382 HSP90AB3PQ58FF7 597 aa15.5■□□□□ 0.07
CCM2-212ENST00000480382 SUSD4Q5VX71 490 aa15.5■□□□□ 0.07
CCM2-212ENST00000480382 G2E3Q7L622 706 aa15.5■□□□□ 0.07
CCM2-212ENST00000480382 DDX60Q8IY21 1712 aaKnown RBP15.49■□□□□ 0.07
CCM2-212ENST00000480382 NTSR2O95665 410 aa15.49■□□□□ 0.07
CCM2-212ENST00000480382 TCIRG1Q13488 830 aa15.49■□□□□ 0.07
CCM2-212ENST00000480382 PARP10Q53GL7 1025 aa15.49■□□□□ 0.07
CCM2-212ENST00000480382 TPTE2Q6XPS3 522 aa15.49■□□□□ 0.07
CCM2-212ENST00000480382 RIC3Q7Z5B4 369 aa15.49■□□□□ 0.07
CCM2-212ENST00000480382 NUTM1Q86Y26 1132 aa15.49■□□□□ 0.07
CCM2-212ENST00000480382 BRIP1Q9BX63 1249 aa15.49■□□□□ 0.07
CCM2-212ENST00000480382 NYXQ9GZU5 481 aa15.49■□□□□ 0.07
CCM2-212ENST00000480382 ADCY9O60503 1353 aa15.49■□□□□ 0.07
CCM2-212ENST00000480382 CHD4Q14839 1912 aa15.49■□□□□ 0.07
CCM2-212ENST00000480382 GTF2E1P29083 439 aaPredicted RBP15.48■□□□□ 0.07
CCM2-212ENST00000480382 ERFEQ4G0M1 354 aa15.48■□□□□ 0.07
CCM2-212ENST00000480382 C2CD5Q86YS7 1000 aa15.48■□□□□ 0.07
CCM2-212ENST00000480382 TRMT2AQ8IZ69 625 aaKnown RBP15.48■□□□□ 0.07
CCM2-212ENST00000480382 ZNF428Q96B54 188 aa15.48■□□□□ 0.07
CCM2-212ENST00000480382 ATP5J2-PTCD1G3V325 749 aa15.47■□□□□ 0.07
CCM2-212ENST00000480382 DDX58O95786 925 aaKnown RBP15.47■□□□□ 0.07
CCM2-212ENST00000480382 PDE6BP35913 854 aa15.47■□□□□ 0.07
CCM2-212ENST00000480382 FLIIQ13045 1269 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms