RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 CHMP4AQ9BY43 222 aa8.18□□□□□ -1.1
HERC4-210ENST00000480158 ZBTB3Q9H5J0 574 aa8.18□□□□□ -1.1
HERC4-210ENST00000480158 KIF16BQ96L93 1317 aa8.18□□□□□ -1.1
HERC4-210ENST00000480158 PI4KAP2A4QPH2 592 aa8.18□□□□□ -1.1
HERC4-210ENST00000480158 IPO8O15397 1037 aaKnown RBP8.18□□□□□ -1.1
HERC4-210ENST00000480158 RLBP1P12271 317 aa8.18□□□□□ -1.1
HERC4-210ENST00000480158 BAG6P46379 1132 aa8.18□□□□□ -1.1
HERC4-210ENST00000480158 PI4KAP1Q8N8J0 262 aa8.18□□□□□ -1.1
HERC4-210ENST00000480158 AK7Q96M32 723 aa8.18□□□□□ -1.1
HERC4-210ENST00000480158 SLC27A3Q5K4L6 730 aa8.17□□□□□ -1.1
HERC4-210ENST00000480158 LRP10Q7Z4F1 713 aa8.17□□□□□ -1.1
HERC4-210ENST00000480158 RIC3Q7Z5B4 369 aa8.17□□□□□ -1.1
HERC4-210ENST00000480158 CAMKK2Q96RR4 588 aa8.17□□□□□ -1.1
HERC4-210ENST00000480158 COG6Q9Y2V7 657 aa8.17□□□□□ -1.1
HERC4-210ENST00000480158 ANKRD13DQ6ZTN6 518 aa8.17□□□□□ -1.1
HERC4-210ENST00000480158 TFCP2L1Q9NZI6 479 aa8.17□□□□□ -1.1
HERC4-210ENST00000480158 MAP3K2Q9Y2U5 619 aa8.17□□□□□ -1.1
HERC4-210ENST00000480158 TJP1Q07157 1748 aa8.16□□□□□ -1.1
HERC4-210ENST00000480158 NEFLP07196 543 aa8.16□□□□□ -1.1
HERC4-210ENST00000480158 NBR1Q14596 966 aa8.16□□□□□ -1.1
HERC4-210ENST00000480158 ZNF827Q17R98 1081 aa8.16□□□□□ -1.1
HERC4-210ENST00000480158 DZIP1LQ8IYY4 767 aaKnown RBP8.16□□□□□ -1.1
HERC4-210ENST00000480158 UPF1Q92900 1129 aaKnown RBP eCLIP8.16□□□□□ -1.1
HERC4-210ENST00000480158 RTCBQ9Y3I0 505 aaKnown RBP8.16□□□□□ -1.1
HERC4-210ENST00000480158 ATP5J2-PTCD1G3V325 749 aa8.15□□□□□ -1.1
HERC4-210ENST00000480158 IL6STP40189 918 aaPredicted RBP8.15□□□□□ -1.1
HERC4-210ENST00000480158 KIF6Q6ZMV9 814 aa8.15□□□□□ -1.1
HERC4-210ENST00000480158 DZIP3Q86Y13 1208 aaKnown RBP8.15□□□□□ -1.1
HERC4-210ENST00000480158 ITPRIPQ8IWB1 547 aa8.15□□□□□ -1.1
HERC4-210ENST00000480158 TMEM57Q8N5G2 664 aa8.15□□□□□ -1.1
HERC4-210ENST00000480158 API5Q9BZZ5 524 aaKnown RBP8.15□□□□□ -1.1
HERC4-210ENST00000480158 TNS1Q9HBL0 1735 aaKnown RBP8.15□□□□□ -1.1
HERC4-210ENST00000480158 PTPRCP08575 1304 aa8.15□□□□□ -1.1
HERC4-210ENST00000480158 ERBB4Q15303 1308 aa8.15□□□□□ -1.1
HERC4-210ENST00000480158 RNF123Q5XPI4 1314 aa8.15□□□□□ -1.1
HERC4-210ENST00000480158 DDX58O95786 925 aaKnown RBP8.15□□□□□ -1.1
HERC4-210ENST00000480158 EIF5P55010 431 aaKnown RBP8.15□□□□□ -1.1
HERC4-210ENST00000480158 BRPF1P55201 1214 aaPredicted RBP8.15□□□□□ -1.1
HERC4-210ENST00000480158 KSR2Q6VAB6 950 aa8.15□□□□□ -1.1
HERC4-210ENST00000480158 CRBNQ96SW2 442 aa8.15□□□□□ -1.1
HERC4-210ENST00000480158 ADCY9O60503 1353 aa8.15□□□□□ -1.11
HERC4-210ENST00000480158 CNTNAP4Q9C0A0 1308 aa8.15□□□□□ -1.11
HERC4-210ENST00000480158 LY75O60449 1722 aa8.15□□□□□ -1.11
HERC4-210ENST00000480158 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.14□□□□□ -1.11
HERC4-210ENST00000480158 RPS6KA4O75676 772 aa8.14□□□□□ -1.11
HERC4-210ENST00000480158 HLFQ16534 295 aa8.14□□□□□ -1.11
HERC4-210ENST00000480158 CWF19L2Q2TBE0 894 aaKnown RBP8.14□□□□□ -1.11
HERC4-210ENST00000480158 TRAPPC3LQ5T215 181 aa8.14□□□□□ -1.11
HERC4-210ENST00000480158 EXOC6Q8TAG9 804 aa8.14□□□□□ -1.11
HERC4-210ENST00000480158 DNAAF4Q8WXU2 420 aa8.14□□□□□ -1.11
HERC4-210ENST00000480158 ARHGAP45Q92619 1136 aa8.14□□□□□ -1.11
HERC4-210ENST00000480158 ARHGEF1Q92888 912 aaKnown RBP8.14□□□□□ -1.11
HERC4-210ENST00000480158 MYD88Q99836 296 aa8.14□□□□□ -1.11
HERC4-210ENST00000480158 ANO8Q9HCE9 1232 aaPredicted RBP8.14□□□□□ -1.11
HERC4-210ENST00000480158 SRP68Q9UHB9 627 aaKnown RBP8.14□□□□□ -1.11
HERC4-210ENST00000480158 LAMB4A4D0S4 1761 aa8.14□□□□□ -1.11
HERC4-210ENST00000480158 FAM177BA6PVY3 158 aa8.14□□□□□ -1.11
HERC4-210ENST00000480158 GPTP24298 496 aa8.14□□□□□ -1.11
HERC4-210ENST00000480158 RFC4P35249 363 aa8.14□□□□□ -1.11
HERC4-210ENST00000480158 RTL5Q5HYW3 569 aaPredicted RBP8.14□□□□□ -1.11
HERC4-210ENST00000480158 RC3H1Q5TC82 1133 aaKnown RBP8.14□□□□□ -1.11
HERC4-210ENST00000480158 BICDL1Q6ZP65 573 aa8.14□□□□□ -1.11
HERC4-210ENST00000480158 CCDC125Q86Z20 511 aa8.14□□□□□ -1.11
HERC4-210ENST00000480158 JARID2Q92833 1246 aaPredicted RBP8.14□□□□□ -1.11
HERC4-210ENST00000480158 ZBTB12Q9Y330 459 aaPredicted RBP8.14□□□□□ -1.11
HERC4-210ENST00000480158 COL15A1P39059 1388 aa8.14□□□□□ -1.11
HERC4-210ENST00000480158 USPL1Q5W0Q7 1092 aa8.13□□□□□ -1.11
HERC4-210ENST00000480158 PLCD3Q8N3E9 789 aa8.13□□□□□ -1.11
HERC4-210ENST00000480158 PLBD2Q8NHP8 589 aa8.13□□□□□ -1.11
HERC4-210ENST00000480158 MYH14Q7Z406 1995 aaKnown RBP8.13□□□□□ -1.11
HERC4-210ENST00000480158 ZPR1O75312 459 aa8.13□□□□□ -1.11
HERC4-210ENST00000480158 PDE3AQ14432 1141 aa8.13□□□□□ -1.11
HERC4-210ENST00000480158 GTF3C3Q9Y5Q9 886 aa8.13□□□□□ -1.11
HERC4-210ENST00000480158 C4BP0C0L5 1744 aa8.13□□□□□ -1.11
HERC4-210ENST00000480158 MAP3K15Q6ZN16 1313 aa8.13□□□□□ -1.11
HERC4-210ENST00000480158 NEXNQ0ZGT2 675 aa8.12□□□□□ -1.11
HERC4-210ENST00000480158 AKT1S1Q96B36 256 aa8.12□□□□□ -1.11
HERC4-210ENST00000480158 PDGFDQ9GZP0 370 aaPredicted RBP8.12□□□□□ -1.11
HERC4-210ENST00000480158 ABCC4O15439 1325 aa8.12□□□□□ -1.11
HERC4-210ENST00000480158 COL5A3P25940 1745 aaPredicted RBP8.12□□□□□ -1.11
HERC4-210ENST00000480158 MS4A1P11836 297 aa8.12□□□□□ -1.11
HERC4-210ENST00000480158 MVPQ14764 893 aaKnown RBP8.12□□□□□ -1.11
HERC4-210ENST00000480158 BEND3Q5T5X7 828 aa8.12□□□□□ -1.11
HERC4-210ENST00000480158 METTL22Q9BUU2 404 aaPredicted RBP8.12□□□□□ -1.11
HERC4-210ENST00000480158 SRCIN1Q9C0H9 1055 aa8.12□□□□□ -1.11
HERC4-210ENST00000480158 STK32BQ9NY57 414 aa8.12□□□□□ -1.11
HERC4-210ENST00000480158 SRCAPQ6ZRS2 3230 aa8.11□□□□□ -1.11
HERC4-210ENST00000480158 CAMTA2O94983 1202 aa8.11□□□□□ -1.11
HERC4-210ENST00000480158 IGKV5-2P06315 115 aa8.11□□□□□ -1.11
HERC4-210ENST00000480158 SLC15A2Q16348 729 aa8.11□□□□□ -1.11
HERC4-210ENST00000480158 COL23A1Q86Y22 540 aaPredicted RBP8.11□□□□□ -1.11
HERC4-210ENST00000480158 C1orf115Q9H7X2 142 aa8.11□□□□□ -1.11
HERC4-210ENST00000480158 A0A087WZG4 1122 aa8.11□□□□□ -1.11
HERC4-210ENST00000480158 TULP1O00294 542 aaPredicted RBP8.11□□□□□ -1.11
HERC4-210ENST00000480158 CCT4P50991 539 aaKnown RBP8.11□□□□□ -1.11
HERC4-210ENST00000480158 MSL1Q68DK7 614 aa8.11□□□□□ -1.11
HERC4-210ENST00000480158 INTS3Q68E01 1043 aaKnown RBP8.11□□□□□ -1.11
HERC4-210ENST00000480158 GIGYF2Q6Y7W6 1299 aaKnown RBP8.11□□□□□ -1.11
HERC4-210ENST00000480158 MEIS3Q99687 375 aa8.11□□□□□ -1.11
HERC4-210ENST00000480158 NARFQ9UHQ1 456 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms