RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 ABTB2Q8N961 1025 aa7.09□□□□□ -1.28
PRPF4B-205ENST00000480058 IBTKQ9P2D0 1353 aaPredicted RBP7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 NUTM2FA1L443 756 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 IARSP41252 1262 aaKnown RBP7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 MAP3K12Q12852 859 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 AIMP1Q12904 312 aaKnown RBP7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 C6orf163Q5TEZ5 329 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 BRAPQ7Z569 592 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 C1orf115Q9H7X2 142 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 CNNM1Q9NRU3 951 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 PATL2C9JE40 543 aaKnown RBP7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 CBX1P83916 185 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 CCDC186Q7Z3E2 898 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 PIBF1Q8WXW3 757 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 AIDAQ96BJ3 306 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 MPHOSPH8Q99549 860 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 NSRP1Q9H0G5 558 aaKnown RBP7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 IL1RAPL2Q9NP60 686 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 PDE1AP54750 535 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 TMEM266Q2M3C6 531 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 HOOK3Q86VS8 718 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 ATF3P18847 181 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 KIF5BP33176 963 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 C20orf194Q5TEA3 1177 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 CACNA2D4Q7Z3S7 1137 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 TCP11L1Q9NUJ3 509 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 MAP2K1Q02750 393 aaPredicted RBP7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 NEK1Q96PY6 1258 aa7.08□□□□□ -1.28
PRPF4B-205ENST00000480058 KRT86O43790 486 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 AKR1B10O60218 316 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 F13A1P00488 732 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 HOXB7P09629 217 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 CEBPZQ03701 1054 aaKnown RBP7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 CCDC9Q9Y3X0 531 aaKnown RBP7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 LDHCP07864 332 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 GTF2F1P35269 517 aaKnown RBP eCLIP7.07□□□□□ -1.282e-8■■■■■ 34.1
PRPF4B-205ENST00000480058 TXNDC2Q86VQ3 553 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 ORC3Q9UBD5 711 aaPredicted RBP7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 ARHGAP5Q13017 1502 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 MNAT1P51948 309 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 UHRF1BP1Q6BDS2 1440 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 NECTIN2Q92692 538 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 TANGO6Q9C0B7 1094 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 ELP1O95163 1332 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 PRG4Q92954 1404 aaPredicted RBP7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 A0A1B0GUA9 196 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 ATP8B1O43520 1251 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 TACC1O75410 805 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 TDO2P48775 406 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 IFFO1Q0D2I5 559 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 LMBR1Q8WVP7 490 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 FBXW7Q969H0 707 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 ESYT1Q9BSJ8 1104 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 TTC21AQ8NDW8 1320 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 UBA7P41226 1012 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 PPP2R5BQ15173 497 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 CFAP58Q5T655 872 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 CNGA4Q8IV77 575 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 RHPN1Q8TCX5 695 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 GOLGA1Q92805 767 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 TM6SF1Q9BZW5 370 aa7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 MKRN1Q9UHC7 482 aaKnown RBP7.07□□□□□ -1.28
PRPF4B-205ENST00000480058 CCDC194A0A1B0GVG4 234 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 ZNF500O60304 480 aaPredicted RBP7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 UQCRFS1P1P0C7P4 283 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 NUTM2GQ5VZR2 741 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 USP37Q86T82 979 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 A0A087WZG4 1122 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 ATP8B2P98198 1209 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 NAPBQ9H115 298 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 IMPACTQ9P2X3 320 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 N4BP3O15049 544 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 VAV2P52735 878 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 ENOX2Q16206 610 aaKnown RBP7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 ZBTB40Q9NUA8 1239 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 TRIM14Q14142 442 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 MYRIPQ8NFW9 859 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 NUDT16Q96DE0 195 aaKnown RBP7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 RASSF4Q9H2L5 321 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 CNNM2Q9H8M5 875 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 PCDHB15Q9Y5E8 787 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 ARHGEF12Q9NZN5 1544 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 ZNF213O14771 459 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 PSMA7O14818 248 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 B4GALNT4Q76KP1 1039 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 TMC6Q7Z403 805 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 TAX1BP1Q86VP1 789 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 SPATA24Q86W54 205 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 NCOA7Q8NI08 942 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 PPP1R9BQ96SB3 815 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 TRIM21P19474 475 aaKnown RBP7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 LMAN1P49257 510 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 POTEDQ86YR6 584 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 NUTM2AQ8IVF1 878 aaPredicted RBP7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 FAM177A1Q8N128 213 aaPredicted RBP7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 CCDC155Q8N6L0 562 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 LLPHQ9BRT6 129 aaKnown RBP7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 PRM3Q9NNZ6 103 aa7.06□□□□□ -1.28
PRPF4B-205ENST00000480058 KIF24Q5T7B8 1368 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms