RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 TULP2O00295 520 aa13.09□□□□□ -0.31
CHD6-208ENST00000480022 CHAMP1Q96JM3 812 aa13.09□□□□□ -0.31
CHD6-208ENST00000480022 MORC2Q9Y6X9 1032 aaPredicted RBP13.09□□□□□ -0.31
CHD6-208ENST00000480022 COL5A2P05997 1499 aaPredicted RBP13.09□□□□□ -0.31
CHD6-208ENST00000480022 FNBP4Q8N3X1 1017 aaPredicted RBP13.08□□□□□ -0.31
CHD6-208ENST00000480022 TSPYL1Q9H0U9 437 aa13.08□□□□□ -0.31
CHD6-208ENST00000480022 ANKRD45Q5TZF3 282 aa13.08□□□□□ -0.32
CHD6-208ENST00000480022 CNPY4Q8N129 248 aa13.08□□□□□ -0.32
CHD6-208ENST00000480022 TMEM57Q8N5G2 664 aa13.08□□□□□ -0.32
CHD6-208ENST00000480022 STRN4Q9NRL3 753 aa13.08□□□□□ -0.32
CHD6-208ENST00000480022 ST18O60284 1047 aa13.07□□□□□ -0.32
CHD6-208ENST00000480022 EVA1CP58658 441 aa13.07□□□□□ -0.32
CHD6-208ENST00000480022 CSB-PGBD3P0DP91 1061 aa13.07□□□□□ -0.32
CHD6-208ENST00000480022 CAPN2P17655 700 aa13.07□□□□□ -0.32
CHD6-208ENST00000480022 BCL9LQ86UU0 1499 aa13.06□□□□□ -0.32
CHD6-208ENST00000480022 TPM3P06753 285 aa13.06□□□□□ -0.32
CHD6-208ENST00000480022 LARP1Q6PKG0 1096 aaKnown RBP13.06□□□□□ -0.32
CHD6-208ENST00000480022 GCC1Q96CN9 775 aa13.06□□□□□ -0.32
CHD6-208ENST00000480022 AFF2P51816 1311 aa13.06□□□□□ -0.32
CHD6-208ENST00000480022 WDR17Q8IZU2 1322 aa13.06□□□□□ -0.32
CHD6-208ENST00000480022 PLCH1Q4KWH8 1693 aa13.06□□□□□ -0.32
CHD6-208ENST00000480022 NBPF6Q5VWK0 638 aa13.06□□□□□ -0.32
CHD6-208ENST00000480022 UNC5CLQ8IV45 518 aa13.06□□□□□ -0.32
CHD6-208ENST00000480022 KRT222Q8N1A0 295 aa13.06□□□□□ -0.32
CHD6-208ENST00000480022 NBPF4Q96M43 638 aa13.06□□□□□ -0.32
CHD6-208ENST00000480022 EYA1Q99502 592 aa13.06□□□□□ -0.32
CHD6-208ENST00000480022 TRIM6-TRIM34B2RNG4 842 aa13.05□□□□□ -0.32
CHD6-208ENST00000480022 U2SURPO15042 1029 aaKnown RBP13.05□□□□□ -0.32
CHD6-208ENST00000480022 SSH1Q8WYL5 1049 aa13.05□□□□□ -0.32
CHD6-208ENST00000480022 TRIM34Q9BYJ4 488 aa13.05□□□□□ -0.32
CHD6-208ENST00000480022 USP21Q9UK80 565 aa13.05□□□□□ -0.32
CHD6-208ENST00000480022 FOXD4L5Q5VV16 416 aaPredicted RBP13.05□□□□□ -0.32
CHD6-208ENST00000480022 FOXD4L4Q8WXT5 416 aaPredicted RBP13.05□□□□□ -0.32
CHD6-208ENST00000480022 NOB1Q9ULX3 412 aaKnown RBP13.05□□□□□ -0.32
CHD6-208ENST00000480022 PYCARDQ9ULZ3 195 aa13.05□□□□□ -0.32
CHD6-208ENST00000480022 RGS22Q8NE09 1264 aa13.04□□□□□ -0.32
CHD6-208ENST00000480022 KIF18AQ8NI77 898 aa13.04□□□□□ -0.32
CHD6-208ENST00000480022 NLRP2Q9NX02 1062 aa13.04□□□□□ -0.32
CHD6-208ENST00000480022 RGPD5Q99666 1765 aa13.04□□□□□ -0.32
CHD6-208ENST00000480022 FAM193AP78312 1265 aa13.04□□□□□ -0.32
CHD6-208ENST00000480022 TOM1L2Q6ZVM7 507 aa13.04□□□□□ -0.32
CHD6-208ENST00000480022 USHBP1Q8N6Y0 703 aa13.03□□□□□ -0.32
CHD6-208ENST00000480022 USP26Q9BXU7 913 aa13.03□□□□□ -0.32
CHD6-208ENST00000480022 IGSF1Q8N6C5 1336 aa13.03□□□□□ -0.32
CHD6-208ENST00000480022 NRAPQ86VF7 1730 aa13.03□□□□□ -0.32
CHD6-208ENST00000480022 ERICH4A6NGS2 130 aa13.03□□□□□ -0.32
CHD6-208ENST00000480022 KDM4AO75164 1064 aa13.03□□□□□ -0.32
CHD6-208ENST00000480022 U2AF1L5P0DN76 240 aaPredicted RBP13.03□□□□□ -0.32
CHD6-208ENST00000480022 U2AF1Q01081 240 aaKnown RBP eCLIP13.03□□□□□ -0.32
CHD6-208ENST00000480022 EXOSC9Q06265 439 aaKnown RBP13.03□□□□□ -0.32
CHD6-208ENST00000480022 KCNF1Q9H3M0 494 aa13.03□□□□□ -0.32
CHD6-208ENST00000480022 RNF216Q9NWF9 866 aaPredicted RBP13.03□□□□□ -0.32
CHD6-208ENST00000480022 NWD2Q9ULI1 1742 aa13.03□□□□□ -0.32
CHD6-208ENST00000480022 CREBRFQ8IUR6 639 aa13.03□□□□□ -0.32
CHD6-208ENST00000480022 TSR2Q969E8 191 aaKnown RBP13.03□□□□□ -0.32
CHD6-208ENST00000480022 CRB1P82279 1406 aa13.02□□□□□ -0.32
CHD6-208ENST00000480022 SMTNL1A8MU46 457 aa13.02□□□□□ -0.33
CHD6-208ENST00000480022 IPO8O15397 1037 aaKnown RBP13.02□□□□□ -0.33
CHD6-208ENST00000480022 AEBP1Q8IUX7 1158 aa13.02□□□□□ -0.33
CHD6-208ENST00000480022 BRD1O95696 1058 aa13.02□□□□□ -0.33
CHD6-208ENST00000480022 HMOX1P09601 288 aa13.02□□□□□ -0.33
CHD6-208ENST00000480022 SULT6B1Q6IMI4 303 aa13.02□□□□□ -0.33
CHD6-208ENST00000480022 CARD10Q9BWT7 1032 aa13.02□□□□□ -0.33
CHD6-208ENST00000480022 HCLS1P14317 486 aaPredicted RBP13.01□□□□□ -0.33
CHD6-208ENST00000480022 VPS72Q15906 364 aa13.01□□□□□ -0.33
CHD6-208ENST00000480022 CERS3Q8IU89 383 aa13.01□□□□□ -0.33
CHD6-208ENST00000480022 GOLGA6L6A8MZA4 724 aa13.01□□□□□ -0.33
CHD6-208ENST00000480022 CLSTN1O94985 981 aa13.01□□□□□ -0.33
CHD6-208ENST00000480022 NCAPD2Q15021 1401 aa13.01□□□□□ -0.33
CHD6-208ENST00000480022 RGPD1P0DJD0 1748 aa13.01□□□□□ -0.33
CHD6-208ENST00000480022 ZNF592Q92610 1267 aa13□□□□□ -0.33
CHD6-208ENST00000480022 KDRP35968 1356 aa13□□□□□ -0.33
CHD6-208ENST00000480022 SPATA31A1Q5TZJ5 1347 aa13□□□□□ -0.33
CHD6-208ENST00000480022 SPATA31A5Q5VU36 1347 aa13□□□□□ -0.33
CHD6-208ENST00000480022 SPATA31A7Q8IWB4 1347 aa13□□□□□ -0.33
CHD6-208ENST00000480022 CCDC183Q5T5S1 534 aa13□□□□□ -0.33
CHD6-208ENST00000480022 ATRNO75882 1429 aa12.99□□□□□ -0.33
CHD6-208ENST00000480022 GSPT1P15170 499 aaKnown RBP12.99□□□□□ -0.33
CHD6-208ENST00000480022 FEZ2Q9UHY8 353 aaPredicted RBP12.99□□□□□ -0.33
CHD6-208ENST00000480022 GADD45BO75293 160 aaPredicted RBP12.98□□□□□ -0.33
CHD6-208ENST00000480022 FCHSD2O94868 740 aa12.98□□□□□ -0.33
CHD6-208ENST00000480022 ZNF772Q68DY9 489 aaPredicted RBP12.98□□□□□ -0.33
CHD6-208ENST00000480022 INTS3Q68E01 1043 aaKnown RBP12.98□□□□□ -0.33
CHD6-208ENST00000480022 QTRT2Q9H974 415 aaKnown RBP12.98□□□□□ -0.33
CHD6-208ENST00000480022 TRPC5Q9UL62 973 aaPredicted RBP12.98□□□□□ -0.33
CHD6-208ENST00000480022 FAM208AQ9UK61 1670 aaKnown RBP12.98□□□□□ -0.33
CHD6-208ENST00000480022 ZNF397Q8NF99 534 aaPredicted RBP12.98□□□□□ -0.33
CHD6-208ENST00000480022 RGS17Q9UGC6 210 aaPredicted RBP12.98□□□□□ -0.33
CHD6-208ENST00000480022 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.98□□□□□ -0.33
CHD6-208ENST00000480022 CCDC112Q8NEF3 446 aa12.98□□□□□ -0.33
CHD6-208ENST00000480022 FAM53CQ9NYF3 392 aa12.98□□□□□ -0.33
CHD6-208ENST00000480022 PAXBP1Q9Y5B6 917 aa12.98□□□□□ -0.33
CHD6-208ENST00000480022 RGPD2P0DJD1 1756 aa12.97□□□□□ -0.33
CHD6-208ENST00000480022 PRKAR2BP31323 418 aa12.97□□□□□ -0.33
CHD6-208ENST00000480022 NAA30Q147X3 362 aaPredicted RBP12.97□□□□□ -0.33
CHD6-208ENST00000480022 GJD4Q96KN9 370 aaPredicted RBP12.97□□□□□ -0.33
CHD6-208ENST00000480022 PLEKHF1Q96S99 279 aa12.97□□□□□ -0.33
CHD6-208ENST00000480022 EFCC1Q9HA90 598 aa12.97□□□□□ -0.33
CHD6-208ENST00000480022 TRERF1Q96PN7 1200 aa12.97□□□□□ -0.33
CHD6-208ENST00000480022 THRAP3Q9Y2W1 955 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms