RNA–Protein interactions for RNA: ENST00000479820.1

SEMA6C-206, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-206ENST00000479820 ZNF652Q9Y2D9 606 aa20.08■□□□□ 0.81
SEMA6C-206ENST00000479820 ERBB4Q15303 1308 aa20.07■□□□□ 0.8
SEMA6C-206ENST00000479820 KIF3CO14782 793 aa20.07■□□□□ 0.8
SEMA6C-206ENST00000479820 PDE6BP35913 854 aa20.07■□□□□ 0.8
SEMA6C-206ENST00000479820 RIPK4P57078 832 aa20.07■□□□□ 0.8
SEMA6C-206ENST00000479820 C9orf131Q5VYM1 1079 aa20.07■□□□□ 0.8
SEMA6C-206ENST00000479820 LMOD3Q0VAK6 560 aa20.06■□□□□ 0.8
SEMA6C-206ENST00000479820 ZNF526Q8TF50 670 aaPredicted RBP20.06■□□□□ 0.8
SEMA6C-206ENST00000479820 ZC3H4Q9UPT8 1303 aaKnown RBP20.05■□□□□ 0.8
SEMA6C-206ENST00000479820 ST5P78524 1137 aa20.04■□□□□ 0.8
SEMA6C-206ENST00000479820 RUNDC1Q96C34 613 aa20.04■□□□□ 0.8
SEMA6C-206ENST00000479820 KLRG2A4D1S0 409 aaPredicted RBP20.03■□□□□ 0.8
SEMA6C-206ENST00000479820 ERVV-1B6SEH8 477 aa20.03■□□□□ 0.8
SEMA6C-206ENST00000479820 PRELPP51888 382 aa20.03■□□□□ 0.8
SEMA6C-206ENST00000479820 LRP10Q7Z4F1 713 aa20.03■□□□□ 0.8
SEMA6C-206ENST00000479820 CCDC24Q8N4L8 307 aa20.03■□□□□ 0.8
SEMA6C-206ENST00000479820 RNF181Q9P0P0 153 aa20.03■□□□□ 0.8
SEMA6C-206ENST00000479820 TSPYL4Q9UJ04 414 aa20.03■□□□□ 0.8
SEMA6C-206ENST00000479820 RIC1Q4ADV7 1423 aa20.02■□□□□ 0.8
SEMA6C-206ENST00000479820 SENP3-EIF4A1A0A087X0R7 540 aa20.02■□□□□ 0.8
SEMA6C-206ENST00000479820 NFKBIEO00221 500 aa20.02■□□□□ 0.8
SEMA6C-206ENST00000479820 SRGNP10124 158 aa20.02■□□□□ 0.8
SEMA6C-206ENST00000479820 RASSF7Q02833 373 aa20.02■□□□□ 0.8
SEMA6C-206ENST00000479820 HLFQ16534 295 aa20.02■□□□□ 0.8
SEMA6C-206ENST00000479820 STYK1Q6J9G0 422 aa20.02■□□□□ 0.8
SEMA6C-206ENST00000479820 NBPF5PQ86XG9 351 aaPredicted RBP20.02■□□□□ 0.8
SEMA6C-206ENST00000479820 TRIM35Q9UPQ4 493 aa20.02■□□□□ 0.8
SEMA6C-206ENST00000479820 IBTKQ9P2D0 1353 aaPredicted RBP20.02■□□□□ 0.8
SEMA6C-206ENST00000479820 MAP3K15Q6ZN16 1313 aa20.02■□□□□ 0.79
SEMA6C-206ENST00000479820 WDR43Q15061 677 aaKnown RBP eCLIP20.01■□□□□ 0.79
SEMA6C-206ENST00000479820 CCDC146Q8IYE0 955 aa20.01■□□□□ 0.79
SEMA6C-206ENST00000479820 ADAMTS8Q9UP79 889 aa20.01■□□□□ 0.79
SEMA6C-206ENST00000479820 NIP7Q9Y221 180 aaKnown RBP eCLIP20.01■□□□□ 0.79
SEMA6C-206ENST00000479820 LMNB1P20700 586 aa20■□□□□ 0.79
SEMA6C-206ENST00000479820 LTBP3Q9NS15 1303 aa20■□□□□ 0.79
SEMA6C-206ENST00000479820 WDR90Q96KV7 1748 aa19.99■□□□□ 0.79
SEMA6C-206ENST00000479820 LAMB2P55268 1798 aa19.99■□□□□ 0.79
SEMA6C-206ENST00000479820 CHL1O00533 1208 aa19.99■□□□□ 0.79
SEMA6C-206ENST00000479820 PDIA6Q15084 440 aa19.99■□□□□ 0.79
SEMA6C-206ENST00000479820 TTLL7Q6ZT98 887 aa19.99■□□□□ 0.79
SEMA6C-206ENST00000479820 CNKSR1Q969H4 720 aa19.99■□□□□ 0.79
SEMA6C-206ENST00000479820 ZNF622Q969S3 477 aaKnown RBP eCLIP19.99■□□□□ 0.79
SEMA6C-206ENST00000479820 MASTLQ96GX5 879 aa19.99■□□□□ 0.79
SEMA6C-206ENST00000479820 RRP7AQ9Y3A4 280 aaKnown RBP19.99■□□□□ 0.79
SEMA6C-206ENST00000479820 TPTE2Q6XPS3 522 aa19.98■□□□□ 0.79
SEMA6C-206ENST00000479820 NMRK2Q9NPI5 230 aa19.98■□□□□ 0.79
SEMA6C-206ENST00000479820 PRPF40BQ6NWY9 871 aaKnown RBP19.97■□□□□ 0.79
SEMA6C-206ENST00000479820 ABCC12Q96J65 1359 aa19.96■□□□□ 0.79
SEMA6C-206ENST00000479820 NPHP1O15259 732 aa19.96■□□□□ 0.79
SEMA6C-206ENST00000479820 KIF6Q6ZMV9 814 aa19.96■□□□□ 0.79
SEMA6C-206ENST00000479820 C7orf43Q8WVR3 580 aa19.96■□□□□ 0.79
SEMA6C-206ENST00000479820 UBN2Q6ZU65 1347 aa19.96■□□□□ 0.79
SEMA6C-206ENST00000479820 KDM2BQ8NHM5 1336 aa19.96■□□□□ 0.79
SEMA6C-206ENST00000479820 SNED1Q8TER0 1413 aa19.95■□□□□ 0.78
SEMA6C-206ENST00000479820 C21orf2O43822 256 aa19.95■□□□□ 0.78
SEMA6C-206ENST00000479820 TOMM70O94826 608 aa19.95■□□□□ 0.78
SEMA6C-206ENST00000479820 MYL6BP14649 208 aa19.95■□□□□ 0.78
SEMA6C-206ENST00000479820 NPR1P16066 1061 aa19.95■□□□□ 0.78
SEMA6C-206ENST00000479820 HSPA6P17066 643 aa19.95■□□□□ 0.78
SEMA6C-206ENST00000479820 ZEB1P37275 1124 aaPredicted RBP19.95■□□□□ 0.78
SEMA6C-206ENST00000479820 GIGYF2Q6Y7W6 1299 aaKnown RBP19.95■□□□□ 0.78
SEMA6C-206ENST00000479820 ZNF34Q8IZ26 560 aa19.95■□□□□ 0.78
SEMA6C-206ENST00000479820 NEUROD2Q15784 382 aa19.94■□□□□ 0.78
SEMA6C-206ENST00000479820 PROSER3Q2NL68 480 aa19.94■□□□□ 0.78
SEMA6C-206ENST00000479820 CRY2Q49AN0 593 aa19.94■□□□□ 0.78
SEMA6C-206ENST00000479820 SOGA3Q5TF21 947 aa19.94■□□□□ 0.78
SEMA6C-206ENST00000479820 NGEFQ8N5V2 710 aa19.94■□□□□ 0.78
SEMA6C-206ENST00000479820 NYXQ9GZU5 481 aa19.94■□□□□ 0.78
SEMA6C-206ENST00000479820 HOXB7P09629 217 aa19.93■□□□□ 0.78
SEMA6C-206ENST00000479820 ZBTB3Q9H5J0 574 aa19.93■□□□□ 0.78
SEMA6C-206ENST00000479820 DDX60Q8IY21 1712 aaKnown RBP19.91■□□□□ 0.78
SEMA6C-206ENST00000479820 GLTPD2A6NH11 291 aa19.91■□□□□ 0.78
SEMA6C-206ENST00000479820 NTSR2O95665 410 aa19.91■□□□□ 0.78
SEMA6C-206ENST00000479820 ZNF853P0CG23 659 aa19.91■□□□□ 0.78
SEMA6C-206ENST00000479820 EIF2S2P20042 333 aaKnown RBP19.91■□□□□ 0.78
SEMA6C-206ENST00000479820 RBM46Q8TBY0 533 aaKnown RBP19.91■□□□□ 0.78
SEMA6C-206ENST00000479820 CFAP44Q96MT7 982 aa19.91■□□□□ 0.78
SEMA6C-206ENST00000479820 TAOK3Q9H2K8 898 aa19.91■□□□□ 0.78
SEMA6C-206ENST00000479820 SCN4AP35499 1836 aa19.9■□□□□ 0.78
SEMA6C-206ENST00000479820 KRT24Q2M2I5 525 aa19.9■□□□□ 0.78
SEMA6C-206ENST00000479820 DDX21Q9NR30 783 aaKnown RBP eCLIP19.9■□□□□ 0.78
SEMA6C-206ENST00000479820 FAM177BA6PVY3 158 aa19.89■□□□□ 0.77
SEMA6C-206ENST00000479820 ANXA1P04083 346 aa19.89■□□□□ 0.77
SEMA6C-206ENST00000479820 ERFEQ4G0M1 354 aa19.89■□□□□ 0.77
SEMA6C-206ENST00000479820 PARP10Q53GL7 1025 aa19.89■□□□□ 0.77
SEMA6C-206ENST00000479820 SUSD4Q5VX71 490 aa19.89■□□□□ 0.77
SEMA6C-206ENST00000479820 NUTM1Q86Y26 1132 aa19.89■□□□□ 0.77
SEMA6C-206ENST00000479820 ZNF219Q9P2Y4 722 aaPredicted RBP19.89■□□□□ 0.77
SEMA6C-206ENST00000479820 GPTP24298 496 aa19.88■□□□□ 0.77
SEMA6C-206ENST00000479820 HOXA10P31260 410 aaPredicted RBP19.88■□□□□ 0.77
SEMA6C-206ENST00000479820 CCDC93Q567U6 631 aa19.88■□□□□ 0.77
SEMA6C-206ENST00000479820 RNF123Q5XPI4 1314 aa19.87■□□□□ 0.77
SEMA6C-206ENST00000479820 APAF1O14727 1248 aa19.87■□□□□ 0.77
SEMA6C-206ENST00000479820 ALDH1B1P30837 517 aa19.87■□□□□ 0.77
SEMA6C-206ENST00000479820 RRAGCQ9HB90 399 aa19.87■□□□□ 0.77
SEMA6C-206ENST00000479820 GTF2E1P29083 439 aaPredicted RBP19.86■□□□□ 0.77
SEMA6C-206ENST00000479820 COPS6Q7L5N1 327 aa19.86■□□□□ 0.77
SEMA6C-206ENST00000479820 XAGE3Q8WTP9 111 aa19.86■□□□□ 0.77
SEMA6C-206ENST00000479820 MBIPQ9NS73 344 aa19.86■□□□□ 0.77
SEMA6C-206ENST00000479820 IFT57Q9NWB7 429 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms