RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 CARMIL3Q8ND23 1372 aa13.74□□□□□ -0.21
SP140-210ENST00000479539 VIRMAQ69YN4 1812 aaKnown RBP13.74□□□□□ -0.21
SP140-210ENST00000479539 EIF2S2P20042 333 aaKnown RBP13.74□□□□□ -0.21
SP140-210ENST00000479539 CHRNA5P30532 468 aa13.74□□□□□ -0.21
SP140-210ENST00000479539 HLFQ16534 295 aa13.74□□□□□ -0.21
SP140-210ENST00000479539 CCDC27Q2M243 656 aa13.74□□□□□ -0.21
SP140-210ENST00000479539 PRR5LQ6MZQ0 368 aa13.74□□□□□ -0.21
SP140-210ENST00000479539 TTLL7Q6ZT98 887 aa13.74□□□□□ -0.21
SP140-210ENST00000479539 BRIP1Q9BX63 1249 aa13.74□□□□□ -0.21
SP140-210ENST00000479539 IFT57Q9NWB7 429 aa13.74□□□□□ -0.21
SP140-210ENST00000479539 BCS1LQ9Y276 419 aa13.74□□□□□ -0.21
SP140-210ENST00000479539 HOXB7P09629 217 aa13.73□□□□□ -0.21
SP140-210ENST00000479539 MYL6BP14649 208 aa13.73□□□□□ -0.21
SP140-210ENST00000479539 KRT24Q2M2I5 525 aa13.73□□□□□ -0.21
SP140-210ENST00000479539 DALRD3Q5D0E6 543 aaKnown RBP13.73□□□□□ -0.21
SP140-210ENST00000479539 POTEHQ6S545 545 aa13.73□□□□□ -0.21
SP140-210ENST00000479539 NGEFQ8N5V2 710 aa13.73□□□□□ -0.21
SP140-210ENST00000479539 MBIPQ9NS73 344 aa13.73□□□□□ -0.21
SP140-210ENST00000479539 MAP3K15Q6ZN16 1313 aa13.72□□□□□ -0.21
SP140-210ENST00000479539 CAPN15O75808 1086 aa13.72□□□□□ -0.21
SP140-210ENST00000479539 GNAI1P63096 354 aa13.72□□□□□ -0.21
SP140-210ENST00000479539 ZNF784Q8NCA9 323 aaPredicted RBP13.72□□□□□ -0.21
SP140-210ENST00000479539 PDZRN3Q9UPQ7 1066 aa13.72□□□□□ -0.21
SP140-210ENST00000479539 NIP7Q9Y221 180 aaKnown RBP eCLIP13.72□□□□□ -0.21
SP140-210ENST00000479539 KDM3BQ7LBC6 1761 aa13.71□□□□□ -0.21
SP140-210ENST00000479539 DLG5Q8TDM6 1919 aa13.71□□□□□ -0.21
SP140-210ENST00000479539 PDE6BP35913 854 aa13.71□□□□□ -0.21
SP140-210ENST00000479539 PROSER3Q2NL68 480 aa13.71□□□□□ -0.21
SP140-210ENST00000479539 TPTE2Q6XPS3 522 aa13.71□□□□□ -0.21
SP140-210ENST00000479539 KIF6Q6ZMV9 814 aa13.71□□□□□ -0.21
SP140-210ENST00000479539 WWC1Q8IX03 1113 aa13.71□□□□□ -0.21
SP140-210ENST00000479539 CNBD1Q8NA66 436 aa13.71□□□□□ -0.21
SP140-210ENST00000479539 DDX21Q9NR30 783 aaKnown RBP eCLIP13.71□□□□□ -0.21
SP140-210ENST00000479539 H0YIN7 160 aa13.7□□□□□ -0.22
SP140-210ENST00000479539 NBPF5PQ86XG9 351 aaPredicted RBP13.7□□□□□ -0.22
SP140-210ENST00000479539 C2CD5Q86YS7 1000 aa13.7□□□□□ -0.22
SP140-210ENST00000479539 CCDC24Q8N4L8 307 aa13.7□□□□□ -0.22
SP140-210ENST00000479539 ANXA1P04083 346 aa13.69□□□□□ -0.22
SP140-210ENST00000479539 ATXN8OSP0DMR3 200 aa13.69□□□□□ -0.22
SP140-210ENST00000479539 ST5P78524 1137 aa13.69□□□□□ -0.22
SP140-210ENST00000479539 HDGFL1Q5TGJ6 251 aa13.69□□□□□ -0.22
SP140-210ENST00000479539 DUSP27Q5VZP5 1158 aa13.69□□□□□ -0.22
SP140-210ENST00000479539 GIGYF2Q6Y7W6 1299 aaKnown RBP13.69□□□□□ -0.22
SP140-210ENST00000479539 TTLL6Q8N841 843 aa13.69□□□□□ -0.22
SP140-210ENST00000479539 NECTIN2Q92692 538 aa13.69□□□□□ -0.22
SP140-210ENST00000479539 ZBTB3Q9H5J0 574 aa13.69□□□□□ -0.22
SP140-210ENST00000479539 KLRG2A4D1S0 409 aaPredicted RBP13.68□□□□□ -0.22
SP140-210ENST00000479539 NPHP1O15259 732 aa13.68□□□□□ -0.22
SP140-210ENST00000479539 ARHGAP27Q6ZUM4 889 aa13.68□□□□□ -0.22
SP140-210ENST00000479539 COPS6Q7L5N1 327 aa13.68□□□□□ -0.22
SP140-210ENST00000479539 ZNF34Q8IZ26 560 aa13.68□□□□□ -0.22
SP140-210ENST00000479539 KIF13BQ9NQT8 1826 aa13.68□□□□□ -0.22
SP140-210ENST00000479539 IL16Q14005 1332 aa13.67□□□□□ -0.22
SP140-210ENST00000479539 ATP10DQ9P241 1426 aa13.67□□□□□ -0.22
SP140-210ENST00000479539 SRGNP10124 158 aa13.67□□□□□ -0.22
SP140-210ENST00000479539 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
SP140-210ENST00000479539 CHPF2Q9P2E5 772 aa13.67□□□□□ -0.22
SP140-210ENST00000479539 DBF4Q9UBU7 674 aaPredicted RBP13.67□□□□□ -0.22
SP140-210ENST00000479539 SENP3-EIF4A1A0A087X0R7 540 aa13.66□□□□□ -0.22
SP140-210ENST00000479539 STYK1Q6J9G0 422 aa13.66□□□□□ -0.22
SP140-210ENST00000479539 FAM9BQ8IZU0 186 aa13.66□□□□□ -0.22
SP140-210ENST00000479539 C8orf58Q8NAV2 365 aa13.66□□□□□ -0.22
SP140-210ENST00000479539 NYXQ9GZU5 481 aa13.66□□□□□ -0.22
SP140-210ENST00000479539 KIAA1551Q9HCM1 1747 aa13.66□□□□□ -0.22
SP140-210ENST00000479539 NRXN2Q9P2S2 1712 aa13.66□□□□□ -0.22
SP140-210ENST00000479539 SCN7AQ01118 1682 aa13.66□□□□□ -0.22
SP140-210ENST00000479539 UBN2Q6ZU65 1347 aa13.65□□□□□ -0.22
SP140-210ENST00000479539 FAM177BA6PVY3 158 aa13.65□□□□□ -0.22
SP140-210ENST00000479539 ELL2O00472 640 aaPredicted RBP13.65□□□□□ -0.22
SP140-210ENST00000479539 GPTP24298 496 aa13.65□□□□□ -0.22
SP140-210ENST00000479539 AIMP1Q12904 312 aaKnown RBP13.65□□□□□ -0.22
SP140-210ENST00000479539 PARP10Q53GL7 1025 aa13.65□□□□□ -0.22
SP140-210ENST00000479539 SUSD4Q5VX71 490 aa13.65□□□□□ -0.22
SP140-210ENST00000479539 WDR63Q8IWG1 891 aa13.65□□□□□ -0.22
SP140-210ENST00000479539 ZNF622Q969S3 477 aaKnown RBP eCLIP13.65□□□□□ -0.22
SP140-210ENST00000479539 MASTLQ96GX5 879 aa13.65□□□□□ -0.22
SP140-210ENST00000479539 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
SP140-210ENST00000479539 HYPKQ9NX55 129 aa13.65□□□□□ -0.22
SP140-210ENST00000479539 ADCY9O60503 1353 aa13.64□□□□□ -0.23
SP140-210ENST00000479539 GTF2E1P29083 439 aaPredicted RBP13.64□□□□□ -0.23
SP140-210ENST00000479539 HSP90AB3PQ58FF7 597 aa13.64□□□□□ -0.23
SP140-210ENST00000479539 CNKSR1Q969H4 720 aa13.64□□□□□ -0.23
SP140-210ENST00000479539 IBTKQ9P2D0 1353 aaPredicted RBP13.63□□□□□ -0.23
SP140-210ENST00000479539 NTSR2O95665 410 aa13.63□□□□□ -0.23
SP140-210ENST00000479539 TCIRG1Q13488 830 aa13.63□□□□□ -0.23
SP140-210ENST00000479539 ERFEQ4G0M1 354 aa13.63□□□□□ -0.23
SP140-210ENST00000479539 ANKRD13DQ6ZTN6 518 aa13.63□□□□□ -0.23
SP140-210ENST00000479539 PPP1R42Q7Z4L9 355 aa13.63□□□□□ -0.23
SP140-210ENST00000479539 NUTM1Q86Y26 1132 aa13.63□□□□□ -0.23
SP140-210ENST00000479539 TSPYL6Q8N831 410 aa13.63□□□□□ -0.23
SP140-210ENST00000479539 PLBD2Q8NHP8 589 aa13.63□□□□□ -0.23
SP140-210ENST00000479539 TSR2Q969E8 191 aaKnown RBP13.63□□□□□ -0.23
SP140-210ENST00000479539 SALL2Q9Y467 1007 aaPredicted RBP13.63□□□□□ -0.23
SP140-210ENST00000479539 NPR1P16066 1061 aa13.62□□□□□ -0.23
SP140-210ENST00000479539 CRY2Q49AN0 593 aa13.62□□□□□ -0.23
SP140-210ENST00000479539 C9orf131Q5VYM1 1079 aa13.62□□□□□ -0.23
SP140-210ENST00000479539 C7orf43Q8WVR3 580 aa13.62□□□□□ -0.23
SP140-210ENST00000479539 ZNF219Q9P2Y4 722 aaPredicted RBP13.62□□□□□ -0.23
SP140-210ENST00000479539 LAMB4A4D0S4 1761 aa13.62□□□□□ -0.23
SP140-210ENST00000479539 C21orf2O43822 256 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms