RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 HLFQ16534 295 aa23.33■■□□□ 1.33
HLA-A-206ENST00000479320 TTLL6Q8N841 843 aa23.33■■□□□ 1.33
HLA-A-206ENST00000479320 ZNF526Q8TF50 670 aaPredicted RBP23.33■■□□□ 1.33
HLA-A-206ENST00000479320 NPHP1O15259 732 aa23.33■■□□□ 1.32
HLA-A-206ENST00000479320 PDZRN3Q9UPQ7 1066 aa23.33■■□□□ 1.32
HLA-A-206ENST00000479320 MYL6BP14649 208 aa23.32■■□□□ 1.32
HLA-A-206ENST00000479320 NIP7Q9Y221 180 aaKnown RBP eCLIP23.32■■□□□ 1.32
HLA-A-206ENST00000479320 ZNF316A6NFI3 1004 aaPredicted RBP23.31■■□□□ 1.32
HLA-A-206ENST00000479320 CHL1O00533 1208 aa23.31■■□□□ 1.32
HLA-A-206ENST00000479320 ST5P78524 1137 aa23.31■■□□□ 1.32
HLA-A-206ENST00000479320 NBPF5PQ86XG9 351 aaPredicted RBP23.31■■□□□ 1.32
HLA-A-206ENST00000479320 SBF1O95248 1867 aa23.3■■□□□ 1.32
HLA-A-206ENST00000479320 NUP98P52948 1817 aa23.3■■□□□ 1.32
HLA-A-206ENST00000479320 ERBB4Q15303 1308 aa23.3■■□□□ 1.32
HLA-A-206ENST00000479320 C9orf131Q5VYM1 1079 aa23.3■■□□□ 1.32
HLA-A-206ENST00000479320 TTLL7Q6ZT98 887 aa23.3■■□□□ 1.32
HLA-A-206ENST00000479320 ZNF622Q969S3 477 aaKnown RBP eCLIP23.3■■□□□ 1.32
HLA-A-206ENST00000479320 COL11A2P13942 1736 aaPredicted RBP23.29■■□□□ 1.32
HLA-A-206ENST00000479320 ERVV-1B6SEH8 477 aa23.29■■□□□ 1.32
HLA-A-206ENST00000479320 EIF2S2P20042 333 aaKnown RBP23.29■■□□□ 1.32
HLA-A-206ENST00000479320 LAS1LQ9Y4W2 734 aaKnown RBP23.29■■□□□ 1.32
HLA-A-206ENST00000479320 MAP3K15Q6ZN16 1313 aa23.28■■□□□ 1.32
HLA-A-206ENST00000479320 TPTE2Q6XPS3 522 aa23.28■■□□□ 1.32
HLA-A-206ENST00000479320 APAF1O14727 1248 aa23.27■■□□□ 1.32
HLA-A-206ENST00000479320 PDIA6Q15084 440 aa23.27■■□□□ 1.32
HLA-A-206ENST00000479320 CCDC184Q52MB2 194 aa23.27■■□□□ 1.32
HLA-A-206ENST00000479320 KIF6Q6ZMV9 814 aa23.27■■□□□ 1.32
HLA-A-206ENST00000479320 FAM177BA6PVY3 158 aa23.26■■□□□ 1.31
HLA-A-206ENST00000479320 SRGNP10124 158 aa23.26■■□□□ 1.31
HLA-A-206ENST00000479320 RASSF7Q02833 373 aa23.25■■□□□ 1.31
HLA-A-206ENST00000479320 KRT24Q2M2I5 525 aa23.25■■□□□ 1.31
HLA-A-206ENST00000479320 LRP10Q7Z4F1 713 aa23.25■■□□□ 1.31
HLA-A-206ENST00000479320 ZBTB3Q9H5J0 574 aa23.25■■□□□ 1.31
HLA-A-206ENST00000479320 RNF181Q9P0P0 153 aa23.25■■□□□ 1.31
HLA-A-206ENST00000479320 STYK1Q6J9G0 422 aa23.24■■□□□ 1.31
HLA-A-206ENST00000479320 ANXA1P04083 346 aa23.23■■□□□ 1.31
HLA-A-206ENST00000479320 PROSER3Q2NL68 480 aa23.23■■□□□ 1.31
HLA-A-206ENST00000479320 NECTIN2Q92692 538 aa23.23■■□□□ 1.31
HLA-A-206ENST00000479320 CNKSR1Q969H4 720 aa23.23■■□□□ 1.31
HLA-A-206ENST00000479320 MASTLQ96GX5 879 aa23.23■■□□□ 1.31
HLA-A-206ENST00000479320 CFAP44Q96MT7 982 aa23.23■■□□□ 1.31
HLA-A-206ENST00000479320 ZNF219Q9P2Y4 722 aaPredicted RBP23.23■■□□□ 1.31
HLA-A-206ENST00000479320 CACNA1SQ13698 1873 aa23.22■■□□□ 1.31
HLA-A-206ENST00000479320 CCDC88AQ3V6T2 1871 aa23.22■■□□□ 1.31
HLA-A-206ENST00000479320 SLX4Q8IY92 1834 aa23.22■■□□□ 1.31
HLA-A-206ENST00000479320 KLRG2A4D1S0 409 aaPredicted RBP23.22■■□□□ 1.31
HLA-A-206ENST00000479320 C21orf2O43822 256 aa23.22■■□□□ 1.31
HLA-A-206ENST00000479320 KIF3CO14782 793 aa23.21■■□□□ 1.31
HLA-A-206ENST00000479320 GTF2E1P29083 439 aaPredicted RBP23.21■■□□□ 1.31
HLA-A-206ENST00000479320 PRELPP51888 382 aa23.21■■□□□ 1.31
HLA-A-206ENST00000479320 GIGYF2Q6Y7W6 1299 aaKnown RBP23.21■■□□□ 1.31
HLA-A-206ENST00000479320 NFKBIEO00221 500 aa23.2■■□□□ 1.3
HLA-A-206ENST00000479320 GPTP24298 496 aa23.2■■□□□ 1.3
HLA-A-206ENST00000479320 ZNF34Q8IZ26 560 aa23.2■■□□□ 1.3
HLA-A-206ENST00000479320 NYXQ9GZU5 481 aa23.2■■□□□ 1.3
HLA-A-206ENST00000479320 UBN2Q6ZU65 1347 aa23.2■■□□□ 1.3
HLA-A-206ENST00000479320 NPR1P16066 1061 aa23.19■■□□□ 1.3
HLA-A-206ENST00000479320 LMNB1P20700 586 aa23.19■■□□□ 1.3
HLA-A-206ENST00000479320 PRPF40BQ6NWY9 871 aaKnown RBP23.19■■□□□ 1.3
HLA-A-206ENST00000479320 ARFGEF2Q9Y6D5 1785 aa23.19■■□□□ 1.3
HLA-A-206ENST00000479320 FER1L6Q2WGJ9 1857 aa23.18■■□□□ 1.3
HLA-A-206ENST00000479320 ZNF853P0CG23 659 aa23.18■■□□□ 1.3
HLA-A-206ENST00000479320 NUTM1Q86Y26 1132 aa23.18■■□□□ 1.3
HLA-A-206ENST00000479320 DDX21Q9NR30 783 aaKnown RBP eCLIP23.18■■□□□ 1.3
HLA-A-206ENST00000479320 MBIPQ9NS73 344 aa23.18■■□□□ 1.3
HLA-A-206ENST00000479320 SENP3-EIF4A1A0A087X0R7 540 aa23.17■■□□□ 1.3
HLA-A-206ENST00000479320 ERFEQ4G0M1 354 aa23.17■■□□□ 1.3
HLA-A-206ENST00000479320 SUSD4Q5VX71 490 aa23.17■■□□□ 1.3
HLA-A-206ENST00000479320 COPS6Q7L5N1 327 aa23.17■■□□□ 1.3
HLA-A-206ENST00000479320 NMRK2Q9NPI5 230 aa23.17■■□□□ 1.3
HLA-A-206ENST00000479320 ANP32CO43423 234 aa23.16■■□□□ 1.3
HLA-A-206ENST00000479320 HOXB7P09629 217 aa23.16■■□□□ 1.3
HLA-A-206ENST00000479320 AIMP1Q12904 312 aaKnown RBP23.16■■□□□ 1.3
HLA-A-206ENST00000479320 XAGE3Q8WTP9 111 aa23.16■■□□□ 1.3
HLA-A-206ENST00000479320 ABCC12Q96J65 1359 aa23.15■■□□□ 1.3
HLA-A-206ENST00000479320 CALD1Q05682 793 aaKnown RBP23.15■■□□□ 1.3
HLA-A-206ENST00000479320 HDGFL1Q5TGJ6 251 aa23.15■■□□□ 1.3
HLA-A-206ENST00000479320 C7orf43Q8WVR3 580 aa23.15■■□□□ 1.3
HLA-A-206ENST00000479320 IFT57Q9NWB7 429 aa23.15■■□□□ 1.3
HLA-A-206ENST00000479320 CHPF2Q9P2E5 772 aa23.15■■□□□ 1.3
HLA-A-206ENST00000479320 TNRC6CQ9HCJ0 1690 aaKnown RBP23.15■■□□□ 1.3
HLA-A-206ENST00000479320 IBTKQ9P2D0 1353 aaPredicted RBP23.15■■□□□ 1.3
HLA-A-206ENST00000479320 GNAI1P63096 354 aa23.14■■□□□ 1.3
HLA-A-206ENST00000479320 DUSP27Q5VZP5 1158 aa23.14■■□□□ 1.3
HLA-A-206ENST00000479320 KDM2BQ8NHM5 1336 aa23.14■■□□□ 1.29
HLA-A-206ENST00000479320 ZC3H4Q9UPT8 1303 aaKnown RBP23.14■■□□□ 1.29
HLA-A-206ENST00000479320 NTSR2O95665 410 aa23.13■■□□□ 1.29
HLA-A-206ENST00000479320 PARP10Q53GL7 1025 aa23.13■■□□□ 1.29
HLA-A-206ENST00000479320 CRY2Q49AN0 593 aa23.12■■□□□ 1.29
HLA-A-206ENST00000479320 SOGA3Q5TF21 947 aa23.12■■□□□ 1.29
HLA-A-206ENST00000479320 PPP1R42Q7Z4L9 355 aa23.12■■□□□ 1.29
HLA-A-206ENST00000479320 MRS2Q9HD23 443 aa23.12■■□□□ 1.29
HLA-A-206ENST00000479320 LTBP3Q9NS15 1303 aa23.12■■□□□ 1.29
HLA-A-206ENST00000479320 DICER1Q9UPY3 1922 aaKnown RBP23.12■■□□□ 1.29
HLA-A-206ENST00000479320 ALDH1B1P30837 517 aa23.11■■□□□ 1.29
HLA-A-206ENST00000479320 TAOK3Q9H2K8 898 aa23.11■■□□□ 1.29
HLA-A-206ENST00000479320 DBF4Q9UBU7 674 aaPredicted RBP23.11■■□□□ 1.29
HLA-A-206ENST00000479320 RIC1Q4ADV7 1423 aa23.11■■□□□ 1.29
HLA-A-206ENST00000479320 ANKRD36CQ5JPF3 1778 aa23.11■■□□□ 1.29
HLA-A-206ENST00000479320 TIAM2Q8IVF5 1701 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms