RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 HYPKQ9NX55 129 aa20.02■□□□□ 0.8
C9orf3-217ENST00000479161 SERPINB2P05120 415 aa20.01■□□□□ 0.79
C9orf3-217ENST00000479161 MYL6BP14649 208 aa20.01■□□□□ 0.79
C9orf3-217ENST00000479161 C8orf58Q8NAV2 365 aa20.01■□□□□ 0.79
C9orf3-217ENST00000479161 MYH16Q9H6N6 1097 aa20.01■□□□□ 0.79
C9orf3-217ENST00000479161 PDZRN3Q9UPQ7 1066 aa20.01■□□□□ 0.79
C9orf3-217ENST00000479161 KIAA1551Q9HCM1 1747 aa20.01■□□□□ 0.79
C9orf3-217ENST00000479161 ATP10DQ9P241 1426 aa20.01■□□□□ 0.79
C9orf3-217ENST00000479161 GOLGA2Q08379 1002 aa20■□□□□ 0.79
C9orf3-217ENST00000479161 NLGN2Q8NFZ4 835 aa20■□□□□ 0.79
C9orf3-217ENST00000479161 CCDC30Q5VVM6 783 aa19.99■□□□□ 0.79
C9orf3-217ENST00000479161 GIGYF2Q6Y7W6 1299 aaKnown RBP19.99■□□□□ 0.79
C9orf3-217ENST00000479161 TTLL7Q6ZT98 887 aa19.99■□□□□ 0.79
C9orf3-217ENST00000479161 FANCIQ9NVI1 1328 aa19.99■□□□□ 0.79
C9orf3-217ENST00000479161 PROSER3Q2NL68 480 aa19.98■□□□□ 0.79
C9orf3-217ENST00000479161 TSR2Q969E8 191 aaKnown RBP19.98■□□□□ 0.79
C9orf3-217ENST00000479161 CHPF2Q9P2E5 772 aa19.98■□□□□ 0.79
C9orf3-217ENST00000479161 BRCA1P38398 1863 aaKnown RBP19.98■□□□□ 0.79
C9orf3-217ENST00000479161 IBTKQ9P2D0 1353 aaPredicted RBP19.97■□□□□ 0.79
C9orf3-217ENST00000479161 GOLGB1Q14789 3259 aaKnown RBP19.97■□□□□ 0.79
C9orf3-217ENST00000479161 HLFQ16534 295 aa19.97■□□□□ 0.79
C9orf3-217ENST00000479161 COPS6Q7L5N1 327 aa19.97■□□□□ 0.79
C9orf3-217ENST00000479161 KLHL34Q8N239 644 aa19.97■□□□□ 0.79
C9orf3-217ENST00000479161 SALL2Q9Y467 1007 aaPredicted RBP19.97■□□□□ 0.79
C9orf3-217ENST00000479161 PXDNLA1KZ92 1463 aa19.97■□□□□ 0.79
C9orf3-217ENST00000479161 TWISTNBQ3B726 338 aaPredicted RBP19.96■□□□□ 0.79
C9orf3-217ENST00000479161 HSP90AB3PQ58FF7 597 aa19.96■□□□□ 0.79
C9orf3-217ENST00000479161 ZNF34Q8IZ26 560 aa19.96■□□□□ 0.79
C9orf3-217ENST00000479161 TSPYL6Q8N831 410 aa19.96■□□□□ 0.79
C9orf3-217ENST00000479161 BRIP1Q9BX63 1249 aa19.96■□□□□ 0.79
C9orf3-217ENST00000479161 E9PSI1 815 aa19.95■□□□□ 0.78
C9orf3-217ENST00000479161 TPTE2Q6XPS3 522 aa19.95■□□□□ 0.78
C9orf3-217ENST00000479161 PLBD2Q8NHP8 589 aa19.95■□□□□ 0.78
C9orf3-217ENST00000479161 XAGE3Q8WTP9 111 aa19.95■□□□□ 0.78
C9orf3-217ENST00000479161 NIP7Q9Y221 180 aaKnown RBP eCLIP19.95■□□□□ 0.78
C9orf3-217ENST00000479161 ANKRD36CQ5JPF3 1778 aa19.94■□□□□ 0.78
C9orf3-217ENST00000479161 ELL2O00472 640 aaPredicted RBP19.94■□□□□ 0.78
C9orf3-217ENST00000479161 GRIN3BO60391 1043 aa19.94■□□□□ 0.78
C9orf3-217ENST00000479161 PARP10Q53GL7 1025 aa19.94■□□□□ 0.78
C9orf3-217ENST00000479161 PRR5LQ6MZQ0 368 aa19.94■□□□□ 0.78
C9orf3-217ENST00000479161 BICDL1Q6ZP65 573 aa19.94■□□□□ 0.78
C9orf3-217ENST00000479161 NECTIN2Q92692 538 aa19.94■□□□□ 0.78
C9orf3-217ENST00000479161 NYXQ9GZU5 481 aa19.94■□□□□ 0.78
C9orf3-217ENST00000479161 SPINK5Q9NQ38 1064 aaPredicted RBP19.94■□□□□ 0.78
C9orf3-217ENST00000479161 N4BP2Q86UW6 1770 aaPredicted RBP19.93■□□□□ 0.78
C9orf3-217ENST00000479161 DLEC1Q9Y238 1755 aa19.93■□□□□ 0.78
C9orf3-217ENST00000479161 VAMP4O75379 141 aa19.93■□□□□ 0.78
C9orf3-217ENST00000479161 ANXA1P04083 346 aa19.93■□□□□ 0.78
C9orf3-217ENST00000479161 KCNA3P22001 575 aa19.93■□□□□ 0.78
C9orf3-217ENST00000479161 ANKRD13DQ6ZTN6 518 aa19.93■□□□□ 0.78
C9orf3-217ENST00000479161 CNBD1Q8NA66 436 aa19.93■□□□□ 0.78
C9orf3-217ENST00000479161 CHD4Q14839 1912 aa19.93■□□□□ 0.78
C9orf3-217ENST00000479161 RNF123Q5XPI4 1314 aa19.93■□□□□ 0.78
C9orf3-217ENST00000479161 ANKRD31Q8N7Z5 1873 aa19.92■□□□□ 0.78
C9orf3-217ENST00000479161 SENP3-EIF4A1A0A087X0R7 540 aa19.92■□□□□ 0.78
C9orf3-217ENST00000479161 KLRG2A4D1S0 409 aaPredicted RBP19.92■□□□□ 0.78
C9orf3-217ENST00000479161 PDE6BP35913 854 aa19.92■□□□□ 0.78
C9orf3-217ENST00000479161 NBPF5PQ86XG9 351 aaPredicted RBP19.92■□□□□ 0.78
C9orf3-217ENST00000479161 ZBTB3Q9H5J0 574 aa19.92■□□□□ 0.78
C9orf3-217ENST00000479161 RIC1Q4ADV7 1423 aa19.92■□□□□ 0.78
C9orf3-217ENST00000479161 ARFGEF1Q9Y6D6 1849 aa19.91■□□□□ 0.78
C9orf3-217ENST00000479161 ST5P78524 1137 aa19.91■□□□□ 0.78
C9orf3-217ENST00000479161 SLFN5Q08AF3 891 aa19.91■□□□□ 0.78
C9orf3-217ENST00000479161 TRIM28Q13263 835 aaKnown RBP19.91■□□□□ 0.78
C9orf3-217ENST00000479161 TCIRG1Q13488 830 aa19.91■□□□□ 0.78
C9orf3-217ENST00000479161 GPR162Q16538 588 aa19.91■□□□□ 0.78
C9orf3-217ENST00000479161 TRMT2AQ8IZ69 625 aaKnown RBP19.91■□□□□ 0.78
C9orf3-217ENST00000479161 STK31Q9BXU1 1019 aa19.91■□□□□ 0.78
C9orf3-217ENST00000479161 DPEP1P16444 411 aa19.9■□□□□ 0.78
C9orf3-217ENST00000479161 EXOSC9Q06265 439 aaKnown RBP19.9■□□□□ 0.78
C9orf3-217ENST00000479161 ZNF428Q96B54 188 aa19.9■□□□□ 0.78
C9orf3-217ENST00000479161 PIM2Q9P1W9 311 aa19.9■□□□□ 0.78
C9orf3-217ENST00000479161 A0A0G2JLW4 131 aa19.89■□□□□ 0.77
C9orf3-217ENST00000479161 AIMP1Q12904 312 aaKnown RBP19.89■□□□□ 0.77
C9orf3-217ENST00000479161 PPP1R42Q7Z4L9 355 aa19.89■□□□□ 0.77
C9orf3-217ENST00000479161 UBN2Q6ZU65 1347 aa19.88■□□□□ 0.77
C9orf3-217ENST00000479161 H0YIN7 160 aa19.88■□□□□ 0.77
C9orf3-217ENST00000479161 DDX58O95786 925 aaKnown RBP19.88■□□□□ 0.77
C9orf3-217ENST00000479161 ARFGEF2Q9Y6D5 1785 aa19.88■□□□□ 0.77
C9orf3-217ENST00000479161 YBX3P16989 372 aaKnown RBP eCLIP19.87■□□□□ 0.77
C9orf3-217ENST00000479161 ISCA1Q9BUE6 129 aa19.87■□□□□ 0.77
C9orf3-217ENST00000479161 NPHP1O15259 732 aa19.86■□□□□ 0.77
C9orf3-217ENST00000479161 CT47B1P0C2W7 299 aaPredicted RBP19.86■□□□□ 0.77
C9orf3-217ENST00000479161 YY1P25490 414 aa19.86■□□□□ 0.77
C9orf3-217ENST00000479161 SLC10A5Q5PT55 438 aa19.86■□□□□ 0.77
C9orf3-217ENST00000479161 PHAXQ9H814 394 aaKnown RBP19.86■□□□□ 0.77
C9orf3-217ENST00000479161 NTSR2O95665 410 aa19.85■□□□□ 0.77
C9orf3-217ENST00000479161 SLC4A2P04920 1241 aa19.85■□□□□ 0.77
C9orf3-217ENST00000479161 DALRD3Q5D0E6 543 aaKnown RBP19.85■□□□□ 0.77
C9orf3-217ENST00000479161 SUSD4Q5VX71 490 aa19.85■□□□□ 0.77
C9orf3-217ENST00000479161 STYK1Q6J9G0 422 aa19.85■□□□□ 0.77
C9orf3-217ENST00000479161 NLRP10Q86W26 655 aa19.85■□□□□ 0.77
C9orf3-217ENST00000479161 SRGNP10124 158 aa19.84■□□□□ 0.77
C9orf3-217ENST00000479161 GPTP24298 496 aa19.84■□□□□ 0.77
C9orf3-217ENST00000479161 GTF2E1P29083 439 aaPredicted RBP19.84■□□□□ 0.77
C9orf3-217ENST00000479161 CHRNA5P30532 468 aa19.84■□□□□ 0.77
C9orf3-217ENST00000479161 KSR2Q6VAB6 950 aa19.84■□□□□ 0.77
C9orf3-217ENST00000479161 RIC3Q7Z5B4 369 aa19.84■□□□□ 0.77
C9orf3-217ENST00000479161 C2CD5Q86YS7 1000 aa19.84■□□□□ 0.77
C9orf3-217ENST00000479161 UTP14AQ9BVJ6 771 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms