RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 TMEM151AQ8N4L1 468 aa3.55□□□□□ -1.84
PDE1C-208ENST00000478736 MKNK1Q9BUB5 465 aa3.55□□□□□ -1.84
PDE1C-208ENST00000478736 PHACTR1Q9C0D0 580 aa3.55□□□□□ -1.84
PDE1C-208ENST00000478736 NUCKS1Q9H1E3 243 aaKnown RBP3.55□□□□□ -1.84
PDE1C-208ENST00000478736 NDFIP2Q9NV92 336 aa3.55□□□□□ -1.84
PDE1C-208ENST00000478736 KLK14Q9P0G3 267 aa3.55□□□□□ -1.84
PDE1C-208ENST00000478736 DCDC2BA2VCK2 349 aa3.54□□□□□ -1.84
PDE1C-208ENST00000478736 M0R2N6 131 aa3.54□□□□□ -1.84
PDE1C-208ENST00000478736 GRNP28799 593 aaKnown RBP3.54□□□□□ -1.84
PDE1C-208ENST00000478736 SFSWAPQ12872 951 aaKnown RBP3.54□□□□□ -1.84
PDE1C-208ENST00000478736 NAA30Q147X3 362 aaPredicted RBP3.54□□□□□ -1.84
PDE1C-208ENST00000478736 ARSJQ5FYB0 599 aaPredicted RBP3.54□□□□□ -1.84
PDE1C-208ENST00000478736 POTEAQ6S8J7 498 aa3.54□□□□□ -1.84
PDE1C-208ENST00000478736 LYPD4Q6UWN0 246 aa3.54□□□□□ -1.84
PDE1C-208ENST00000478736 ALDH16A1Q8IZ83 802 aa3.54□□□□□ -1.84
PDE1C-208ENST00000478736 CRISPLD1Q9H336 500 aa3.54□□□□□ -1.84
PDE1C-208ENST00000478736 QTRT2Q9H974 415 aaKnown RBP3.54□□□□□ -1.84
PDE1C-208ENST00000478736 USP20Q9Y2K6 914 aa3.54□□□□□ -1.84
PDE1C-208ENST00000478736 GDF11O95390 407 aa3.53□□□□□ -1.84
PDE1C-208ENST00000478736 ADAMTS2O95450 1211 aa3.53□□□□□ -1.84
PDE1C-208ENST00000478736 MAPTP10636 758 aaKnown RBP3.53□□□□□ -1.84
PDE1C-208ENST00000478736 CD33P20138 364 aa3.53□□□□□ -1.84
PDE1C-208ENST00000478736 GTF2E1P29083 439 aaPredicted RBP3.53□□□□□ -1.84
PDE1C-208ENST00000478736 PSMA6P60900 246 aaKnown RBP3.53□□□□□ -1.84
PDE1C-208ENST00000478736 ELOAQ14241 798 aaKnown RBP3.53□□□□□ -1.84
PDE1C-208ENST00000478736 PHLDB3Q6NSJ2 640 aa3.53□□□□□ -1.84
PDE1C-208ENST00000478736 SEPT3Q9UH03 358 aa3.53□□□□□ -1.84
PDE1C-208ENST00000478736 KLF15Q9UIH9 416 aa3.53□□□□□ -1.84
PDE1C-208ENST00000478736 ACIN1Q9UKV3 1341 aaKnown RBP3.52□□□□□ -1.85
PDE1C-208ENST00000478736 KHNYNO15037 678 aaKnown RBP3.52□□□□□ -1.85
PDE1C-208ENST00000478736 IGFBP4P22692 258 aa3.52□□□□□ -1.85
PDE1C-208ENST00000478736 TNP2Q05952 138 aa3.52□□□□□ -1.85
PDE1C-208ENST00000478736 COX20Q5RI15 118 aa3.52□□□□□ -1.85
PDE1C-208ENST00000478736 ZNF385CQ66K41 422 aaPredicted RBP3.52□□□□□ -1.85
PDE1C-208ENST00000478736 BICDL1Q6ZP65 573 aa3.52□□□□□ -1.85
PDE1C-208ENST00000478736 RAB44Q7Z6P3 723 aaPredicted RBP3.52□□□□□ -1.85
PDE1C-208ENST00000478736 TRIM52Q96A61 297 aa3.52□□□□□ -1.85
PDE1C-208ENST00000478736 ACDQ96AP0 544 aa3.52□□□□□ -1.85
PDE1C-208ENST00000478736 SUSD3Q96L08 255 aa3.52□□□□□ -1.85
PDE1C-208ENST00000478736 SLC30A3Q99726 388 aa3.52□□□□□ -1.85
PDE1C-208ENST00000478736 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
PDE1C-208ENST00000478736 IGF1RP08069 1367 aa3.51□□□□□ -1.85
PDE1C-208ENST00000478736 ZBTB39O15060 712 aa3.51□□□□□ -1.85
PDE1C-208ENST00000478736 ATXN7O15265 892 aaPredicted RBP3.51□□□□□ -1.85
PDE1C-208ENST00000478736 CSB-PGBD3P0DP91 1061 aa3.51□□□□□ -1.85
PDE1C-208ENST00000478736 RASSF7Q02833 373 aa3.51□□□□□ -1.85
PDE1C-208ENST00000478736 DGKZQ13574 1117 aa3.51□□□□□ -1.85
PDE1C-208ENST00000478736 MTMR3Q13615 1198 aa3.51□□□□□ -1.85
PDE1C-208ENST00000478736 NBPF1Q3BBV0 1214 aa3.51□□□□□ -1.85
PDE1C-208ENST00000478736 PGBD3Q8N328 593 aa3.51□□□□□ -1.85
PDE1C-208ENST00000478736 RHPN1Q8TCX5 695 aa3.51□□□□□ -1.85
PDE1C-208ENST00000478736 ZDHHC3Q9NYG2 299 aa3.51□□□□□ -1.85
PDE1C-208ENST00000478736 CXXC1Q9P0U4 656 aaPredicted RBP3.51□□□□□ -1.85
PDE1C-208ENST00000478736 DMGDHQ9UI17 866 aaKnown RBP3.51□□□□□ -1.85
PDE1C-208ENST00000478736 RBM19Q9Y4C8 960 aaKnown RBP3.51□□□□□ -1.85
PDE1C-208ENST00000478736 PCDHGC4Q9Y5F7 938 aa3.51□□□□□ -1.85
PDE1C-208ENST00000478736 H7C1W4 665 aa3.5□□□□□ -1.85
PDE1C-208ENST00000478736 TNFRSF10BO14763 440 aa3.5□□□□□ -1.85
PDE1C-208ENST00000478736 OPLAHO14841 1288 aa3.5□□□□□ -1.85
PDE1C-208ENST00000478736 EFSO43281 561 aa3.5□□□□□ -1.85
PDE1C-208ENST00000478736 CELA2BP08218 269 aaPredicted RBP3.5□□□□□ -1.85
PDE1C-208ENST00000478736 TATP17735 454 aaPredicted RBP3.5□□□□□ -1.85
PDE1C-208ENST00000478736 MX2P20592 715 aa3.5□□□□□ -1.85
PDE1C-208ENST00000478736 FGFR3P22607 806 aa3.5□□□□□ -1.85
PDE1C-208ENST00000478736 HIRAP54198 1017 aaPredicted RBP3.5□□□□□ -1.85
PDE1C-208ENST00000478736 EFHC2Q5JST6 749 aa3.5□□□□□ -1.85
PDE1C-208ENST00000478736 GPAT2Q6NUI2 795 aa3.5□□□□□ -1.85
PDE1C-208ENST00000478736 ETFBKMTQ8IXQ9 262 aa3.5□□□□□ -1.85
PDE1C-208ENST00000478736 RETREG2Q8NC44 543 aa3.5□□□□□ -1.85
PDE1C-208ENST00000478736 CLP1Q92989 425 aaKnown RBP3.5□□□□□ -1.85
PDE1C-208ENST00000478736 SHISA8B8ZZ34 492 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 PPP1R15AO75807 674 aaPredicted RBP3.49□□□□□ -1.85
PDE1C-208ENST00000478736 ARHGEF15O94989 841 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 SLURP2P0DP57 97 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 ATP2B4P23634 1241 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 SSFA2P28290 1259 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 PCBP4P57723 403 aaKnown RBP3.49□□□□□ -1.85
PDE1C-208ENST00000478736 SRSF11Q05519 484 aaKnown RBP3.49□□□□□ -1.85
PDE1C-208ENST00000478736 TYRO3Q06418 890 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 SWI5Q1ZZU3 235 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 C1orf53Q5VUE5 145 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 BTLAQ7Z6A9 289 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 NLRP8Q86W28 1048 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 HOMEZQ8IX15 550 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 STAG2Q8N3U4 1231 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 CEP63Q96MT8 703 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 CFHR5Q9BXR6 569 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 ANO2Q9NQ90 1003 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 MBIPQ9NS73 344 aa3.49□□□□□ -1.85
PDE1C-208ENST00000478736 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.49□□□□□ -1.85
PDE1C-208ENST00000478736 ATCAYQ86WG3 371 aa3.48□□□□□ -1.85
PDE1C-208ENST00000478736 FCHSD1Q86WN1 690 aa3.48□□□□□ -1.85
PDE1C-208ENST00000478736 C1orf216Q8TAB5 229 aa3.48□□□□□ -1.85
PDE1C-208ENST00000478736 IFT43Q96FT9 208 aa3.48□□□□□ -1.85
PDE1C-208ENST00000478736 TRERF1Q96PN7 1200 aa3.48□□□□□ -1.85
PDE1C-208ENST00000478736 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
PDE1C-208ENST00000478736 BRD7Q9NPI1 651 aa3.48□□□□□ -1.85
PDE1C-208ENST00000478736 GGA1Q9UJY5 639 aa3.48□□□□□ -1.85
PDE1C-208ENST00000478736 ATXN7L1Q9ULK2 861 aaPredicted RBP3.48□□□□□ -1.85
PDE1C-208ENST00000478736 GJA3Q9Y6H8 435 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms