RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 FAM196BA6NMK8 535 aa7.23□□□□□ -1.25
GPNMB-210ENST00000478451 SEC13P55735 322 aa7.23□□□□□ -1.25
GPNMB-210ENST00000478451 UBAP2LQ14157 1087 aaKnown RBP7.23□□□□□ -1.25
GPNMB-210ENST00000478451 ZCCHC6Q5VYS8 1495 aaKnown RBP7.23□□□□□ -1.25
GPNMB-210ENST00000478451 OIP5O43482 229 aa7.22□□□□□ -1.25
GPNMB-210ENST00000478451 COL8A1P27658 744 aa7.22□□□□□ -1.25
GPNMB-210ENST00000478451 NOS2P35228 1153 aa7.22□□□□□ -1.25
GPNMB-210ENST00000478451 TXLNAP40222 546 aa7.22□□□□□ -1.25
GPNMB-210ENST00000478451 PSMA6P60900 246 aaKnown RBP7.22□□□□□ -1.25
GPNMB-210ENST00000478451 DPYDQ12882 1025 aa7.22□□□□□ -1.25
GPNMB-210ENST00000478451 L3MBTL2Q969R5 705 aa7.22□□□□□ -1.25
GPNMB-210ENST00000478451 CFHR5Q9BXR6 569 aa7.22□□□□□ -1.25
GPNMB-210ENST00000478451 ZNF232Q9UNY5 417 aa7.22□□□□□ -1.25
GPNMB-210ENST00000478451 PHF24Q9UPV7 400 aa7.22□□□□□ -1.25
GPNMB-210ENST00000478451 SERTM1A2A2V5 107 aa7.21□□□□□ -1.26
GPNMB-210ENST00000478451 MX2P20592 715 aa7.21□□□□□ -1.26
GPNMB-210ENST00000478451 RFX1P22670 979 aa7.21□□□□□ -1.26
GPNMB-210ENST00000478451 ARSJQ5FYB0 599 aaPredicted RBP7.21□□□□□ -1.26
GPNMB-210ENST00000478451 NLRP8Q86W28 1048 aa7.21□□□□□ -1.26
GPNMB-210ENST00000478451 ANKMY2Q8IV38 441 aa7.21□□□□□ -1.26
GPNMB-210ENST00000478451 SEMA6BQ9H3T3 888 aa7.21□□□□□ -1.26
GPNMB-210ENST00000478451 CHMP3Q9Y3E7 222 aa7.21□□□□□ -1.26
GPNMB-210ENST00000478451 A0A1W2PNR3 127 aa7.2□□□□□ -1.26
GPNMB-210ENST00000478451 SUPT5HO00267 1087 aaKnown RBP7.2□□□□□ -1.26
GPNMB-210ENST00000478451 EML1O00423 815 aa7.2□□□□□ -1.26
GPNMB-210ENST00000478451 SNRPNP63162 240 aaKnown RBP7.2□□□□□ -1.26
GPNMB-210ENST00000478451 SH3PXD2AQ5TCZ1 1133 aa7.2□□□□□ -1.26
GPNMB-210ENST00000478451 FIGNL1Q6PIW4 674 aa7.2□□□□□ -1.26
GPNMB-210ENST00000478451 BICDL1Q6ZP65 573 aa7.2□□□□□ -1.26
GPNMB-210ENST00000478451 ABHD17AQ96GS6 310 aa7.2□□□□□ -1.26
GPNMB-210ENST00000478451 ATXN7L1Q9ULK2 861 aaPredicted RBP7.2□□□□□ -1.26
GPNMB-210ENST00000478451 HIRAP54198 1017 aaPredicted RBP7.19□□□□□ -1.26
GPNMB-210ENST00000478451 CDCA8Q53HL2 280 aa7.19□□□□□ -1.26
GPNMB-210ENST00000478451 LCE1DQ5T752 114 aa7.19□□□□□ -1.26
GPNMB-210ENST00000478451 ARXQ96QS3 562 aa7.19□□□□□ -1.26
GPNMB-210ENST00000478451 ZIC5Q96T25 663 aa7.19□□□□□ -1.26
GPNMB-210ENST00000478451 ZCCHC2Q9C0B9 1178 aaKnown RBP7.19□□□□□ -1.26
GPNMB-210ENST00000478451 NDFIP2Q9NV92 336 aa7.19□□□□□ -1.26
GPNMB-210ENST00000478451 NSFL1CQ9UNZ2 370 aaKnown RBP7.19□□□□□ -1.26
GPNMB-210ENST00000478451 SCO2A0A1W2PP80 73 aa7.18□□□□□ -1.26
GPNMB-210ENST00000478451 ARID3CA6NKF2 412 aa7.18□□□□□ -1.26
GPNMB-210ENST00000478451 C1QTNF9BB2RNN3 333 aa7.18□□□□□ -1.26
GPNMB-210ENST00000478451 ATXN7O15265 892 aaPredicted RBP7.18□□□□□ -1.26
GPNMB-210ENST00000478451 C21orf2O43822 256 aa7.18□□□□□ -1.26
GPNMB-210ENST00000478451 PPP1R12BO60237 982 aaPredicted RBP7.18□□□□□ -1.26
GPNMB-210ENST00000478451 BNIP3LO60238 219 aa7.18□□□□□ -1.26
GPNMB-210ENST00000478451 POTEAQ6S8J7 498 aa7.18□□□□□ -1.26
GPNMB-210ENST00000478451 CCDC97Q96F63 343 aaPredicted RBP7.18□□□□□ -1.26
GPNMB-210ENST00000478451 HINFPQ9BQA5 517 aa7.18□□□□□ -1.26
GPNMB-210ENST00000478451 PCDHGC4Q9Y5F7 938 aa7.18□□□□□ -1.26
GPNMB-210ENST00000478451 GJA3Q9Y6H8 435 aa7.18□□□□□ -1.26
GPNMB-210ENST00000478451 DCDC2BA2VCK2 349 aa7.17□□□□□ -1.26
GPNMB-210ENST00000478451 LGR5O75473 907 aa7.17□□□□□ -1.26
GPNMB-210ENST00000478451 FGFR3P22607 806 aa7.17□□□□□ -1.26
GPNMB-210ENST00000478451 MAP2K3P46734 347 aa7.17□□□□□ -1.26
GPNMB-210ENST00000478451 ARTNQ5T4W7 220 aa7.17□□□□□ -1.26
GPNMB-210ENST00000478451 RHPN1Q8TCX5 695 aa7.17□□□□□ -1.26
GPNMB-210ENST00000478451 SCG3Q8WXD2 468 aaKnown RBP7.17□□□□□ -1.26
GPNMB-210ENST00000478451 ZFP64Q9NPA5 681 aa7.17□□□□□ -1.26
GPNMB-210ENST00000478451 GPC6Q9Y625 555 aaPredicted RBP7.17□□□□□ -1.26
GPNMB-210ENST00000478451 ATAD2Q6PL18 1390 aa7.17□□□□□ -1.26
GPNMB-210ENST00000478451 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.16□□□□□ -1.26
GPNMB-210ENST00000478451 PIK3R2O00459 728 aa7.16□□□□□ -1.26
GPNMB-210ENST00000478451 SAMD5Q5TGI4 173 aa7.16□□□□□ -1.26
GPNMB-210ENST00000478451 STAG2Q8N3U4 1231 aa7.16□□□□□ -1.26
GPNMB-210ENST00000478451 GAS2L2Q8NHY3 880 aa7.16□□□□□ -1.26
GPNMB-210ENST00000478451 CHMP7Q8WUX9 453 aaPredicted RBP7.16□□□□□ -1.26
GPNMB-210ENST00000478451 PHACTR1Q9C0D0 580 aa7.16□□□□□ -1.26
GPNMB-210ENST00000478451 SERPINA10Q9UK55 444 aa7.16□□□□□ -1.26
GPNMB-210ENST00000478451 NOVA2Q9UNW9 492 aaKnown RBP7.16□□□□□ -1.26
GPNMB-210ENST00000478451 HCN4Q9Y3Q4 1203 aa7.16□□□□□ -1.26
GPNMB-210ENST00000478451 FAM157BP0CG42 384 aa7.15□□□□□ -1.26
GPNMB-210ENST00000478451 BMP4P12644 408 aa7.15□□□□□ -1.26
GPNMB-210ENST00000478451 C1orf53Q5VUE5 145 aa7.15□□□□□ -1.26
GPNMB-210ENST00000478451 CD163Q86VB7 1156 aa7.15□□□□□ -1.26
GPNMB-210ENST00000478451 FAM200AQ8TCP9 573 aa7.15□□□□□ -1.26
GPNMB-210ENST00000478451 C2orf49Q9BVC5 232 aaPredicted RBP7.15□□□□□ -1.26
GPNMB-210ENST00000478451 KHNYNO15037 678 aaKnown RBP7.14□□□□□ -1.27
GPNMB-210ENST00000478451 MAPTP10636 758 aaKnown RBP7.14□□□□□ -1.27
GPNMB-210ENST00000478451 IGFBP4P22692 258 aa7.14□□□□□ -1.27
GPNMB-210ENST00000478451 CTBSQ01459 385 aa7.14□□□□□ -1.27
GPNMB-210ENST00000478451 TNP2Q05952 138 aa7.14□□□□□ -1.27
GPNMB-210ENST00000478451 LRRC69Q6ZNQ3 347 aa7.14□□□□□ -1.27
GPNMB-210ENST00000478451 KLRG1Q96E93 195 aa7.14□□□□□ -1.27
GPNMB-210ENST00000478451 OXCT2Q9BYC2 517 aaPredicted RBP7.14□□□□□ -1.27
GPNMB-210ENST00000478451 NEUROD4Q9HD90 331 aa7.14□□□□□ -1.27
GPNMB-210ENST00000478451 C2CD2LO14523 706 aa7.13□□□□□ -1.27
GPNMB-210ENST00000478451 SRPK2P78362 688 aaKnown RBP7.13□□□□□ -1.27
GPNMB-210ENST00000478451 NBPF11Q86T75 865 aa7.13□□□□□ -1.27
GPNMB-210ENST00000478451 ALDH16A1Q8IZ83 802 aa7.13□□□□□ -1.27
GPNMB-210ENST00000478451 C7orf43Q8WVR3 580 aa7.13□□□□□ -1.27
GPNMB-210ENST00000478451 HCN2Q9UL51 889 aa7.13□□□□□ -1.27
GPNMB-210ENST00000478451 ZMIZ1Q9ULJ6 1067 aa7.13□□□□□ -1.27
GPNMB-210ENST00000478451 CD33P20138 364 aa7.12□□□□□ -1.27
GPNMB-210ENST00000478451 ELOAQ14241 798 aaKnown RBP7.12□□□□□ -1.27
GPNMB-210ENST00000478451 GRIN2CQ14957 1233 aa7.12□□□□□ -1.27
GPNMB-210ENST00000478451 FOXD4L6Q3SYB3 417 aaPredicted RBP7.12□□□□□ -1.27
GPNMB-210ENST00000478451 FOXD4L3Q6VB84 417 aaPredicted RBP7.12□□□□□ -1.27
GPNMB-210ENST00000478451 STK32AQ8WU08 396 aa7.12□□□□□ -1.27
GPNMB-210ENST00000478451 PBXIP1Q96AQ6 731 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms