RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 ATRNO75882 1429 aa9.42□□□□□ -0.9
SYCP3-204ENST00000478139 PLSCR1O15162 318 aa9.42□□□□□ -0.9
SYCP3-204ENST00000478139 DDX46Q7L014 1031 aaKnown RBP9.42□□□□□ -0.9
SYCP3-204ENST00000478139 CCDC85AQ96PX6 553 aaPredicted RBP9.42□□□□□ -0.9
SYCP3-204ENST00000478139 LRP6O75581 1613 aa9.42□□□□□ -0.9
SYCP3-204ENST00000478139 CCDC27Q2M243 656 aa9.41□□□□□ -0.9
SYCP3-204ENST00000478139 TNS2Q63HR2 1409 aa9.41□□□□□ -0.9
SYCP3-204ENST00000478139 EIF4A1P60842 406 aaKnown RBP9.41□□□□□ -0.9
SYCP3-204ENST00000478139 USPL1Q5W0Q7 1092 aa9.41□□□□□ -0.9
SYCP3-204ENST00000478139 FAM43AQ8N2R8 423 aa9.41□□□□□ -0.9
SYCP3-204ENST00000478139 GZF1Q9H116 711 aaPredicted RBP9.41□□□□□ -0.9
SYCP3-204ENST00000478139 GNAI3P08754 354 aa9.41□□□□□ -0.9
SYCP3-204ENST00000478139 CCDC57Q2TAC2 916 aa9.41□□□□□ -0.9
SYCP3-204ENST00000478139 DZIP1LQ8IYY4 767 aaKnown RBP9.41□□□□□ -0.9
SYCP3-204ENST00000478139 DNAAF4Q8WXU2 420 aa9.41□□□□□ -0.9
SYCP3-204ENST00000478139 RGS17Q9UGC6 210 aaPredicted RBP9.41□□□□□ -0.9
SYCP3-204ENST00000478139 USP32Q8NFA0 1604 aa9.4□□□□□ -0.9
SYCP3-204ENST00000478139 PI4KAP2A4QPH2 592 aa9.4□□□□□ -0.9
SYCP3-204ENST00000478139 CHL1O00533 1208 aa9.4□□□□□ -0.9
SYCP3-204ENST00000478139 HOXB7P09629 217 aa9.4□□□□□ -0.9
SYCP3-204ENST00000478139 IGHMBP2P38935 993 aaKnown RBP9.4□□□□□ -0.9
SYCP3-204ENST00000478139 IL6STP40189 918 aaPredicted RBP9.4□□□□□ -0.9
SYCP3-204ENST00000478139 FLIIQ13045 1269 aa9.4□□□□□ -0.9
SYCP3-204ENST00000478139 KRT24Q2M2I5 525 aa9.4□□□□□ -0.9
SYCP3-204ENST00000478139 PI4KAP1Q8N8J0 262 aa9.4□□□□□ -0.9
SYCP3-204ENST00000478139 SLC16A10Q8TF71 515 aa9.4□□□□□ -0.9
SYCP3-204ENST00000478139 UTP14AQ9BVJ6 771 aaKnown RBP9.4□□□□□ -0.9
SYCP3-204ENST00000478139 CNNM1Q9NRU3 951 aa9.4□□□□□ -0.9
SYCP3-204ENST00000478139 CWC25Q9NXE8 425 aaPredicted RBP9.4□□□□□ -0.9
SYCP3-204ENST00000478139 H0YIN7 160 aa9.4□□□□□ -0.9
SYCP3-204ENST00000478139 MMP10P09238 476 aa9.4□□□□□ -0.9
SYCP3-204ENST00000478139 NKX1-1Q15270 411 aaPredicted RBP9.4□□□□□ -0.9
SYCP3-204ENST00000478139 ONECUT3O60422 494 aaPredicted RBP9.4□□□□□ -0.91
SYCP3-204ENST00000478139 GIGYF1O75420 1035 aaPredicted RBP9.4□□□□□ -0.91
SYCP3-204ENST00000478139 MFAP1P55081 439 aaKnown RBP9.4□□□□□ -0.91
SYCP3-204ENST00000478139 PARP10Q53GL7 1025 aa9.4□□□□□ -0.91
SYCP3-204ENST00000478139 RWDD1Q9H446 243 aaPredicted RBP9.4□□□□□ -0.91
SYCP3-204ENST00000478139 BCS1LQ9Y276 419 aa9.4□□□□□ -0.91
SYCP3-204ENST00000478139 COL16A1Q07092 1604 aaPredicted RBP9.39□□□□□ -0.91
SYCP3-204ENST00000478139 CCT4P50991 539 aaKnown RBP9.39□□□□□ -0.91
SYCP3-204ENST00000478139 C8orf58Q8NAV2 365 aa9.39□□□□□ -0.91
SYCP3-204ENST00000478139 MAP3K2Q9Y2U5 619 aa9.39□□□□□ -0.91
SYCP3-204ENST00000478139 SETD1AO15047 1707 aaKnown RBP9.39□□□□□ -0.91
SYCP3-204ENST00000478139 NCAPD2Q15021 1401 aa9.39□□□□□ -0.91
SYCP3-204ENST00000478139 SSFA2P28290 1259 aa9.39□□□□□ -0.91
SYCP3-204ENST00000478139 G3BP1Q13283 466 aaKnown RBP eCLIP9.39□□□□□ -0.91
SYCP3-204ENST00000478139 RRAGDQ9NQL2 400 aaPredicted RBP9.39□□□□□ -0.91
SYCP3-204ENST00000478139 MVPQ14764 893 aaKnown RBP9.38□□□□□ -0.91
SYCP3-204ENST00000478139 ILDR2Q71H61 639 aa9.38□□□□□ -0.91
SYCP3-204ENST00000478139 PKNOX2Q96KN3 472 aa9.38□□□□□ -0.91
SYCP3-204ENST00000478139 HEG1Q9ULI3 1381 aa9.38□□□□□ -0.91
SYCP3-204ENST00000478139 MEGF6O75095 1541 aa9.38□□□□□ -0.91
SYCP3-204ENST00000478139 SOS1Q07889 1333 aaPredicted RBP9.38□□□□□ -0.91
SYCP3-204ENST00000478139 ERBB4Q15303 1308 aa9.38□□□□□ -0.91
SYCP3-204ENST00000478139 COL14A1Q05707 1796 aaKnown RBP9.38□□□□□ -0.91
SYCP3-204ENST00000478139 TRIM35Q9UPQ4 493 aa9.38□□□□□ -0.91
SYCP3-204ENST00000478139 C6orf229H3BNL8 230 aa9.37□□□□□ -0.91
SYCP3-204ENST00000478139 CDC5LQ99459 802 aaKnown RBP9.37□□□□□ -0.91
SYCP3-204ENST00000478139 KDRP35968 1356 aa9.37□□□□□ -0.91
SYCP3-204ENST00000478139 KSR2Q6VAB6 950 aa9.37□□□□□ -0.91
SYCP3-204ENST00000478139 CCDC24Q8N4L8 307 aa9.37□□□□□ -0.91
SYCP3-204ENST00000478139 PLEKHF1Q96S99 279 aa9.37□□□□□ -0.91
SYCP3-204ENST00000478139 SRP68Q9UHB9 627 aaKnown RBP9.37□□□□□ -0.91
SYCP3-204ENST00000478139 NOB1Q9ULX3 412 aaKnown RBP9.37□□□□□ -0.91
SYCP3-204ENST00000478139 F6X3S4 739 aa9.37□□□□□ -0.91
SYCP3-204ENST00000478139 UBE3BQ7Z3V4 1068 aa9.37□□□□□ -0.91
SYCP3-204ENST00000478139 PANK2Q9BZ23 570 aa9.37□□□□□ -0.91
SYCP3-204ENST00000478139 ANKIB1Q9P2G1 1089 aa9.37□□□□□ -0.91
SYCP3-204ENST00000478139 SH3TC1Q8TE82 1336 aa9.36□□□□□ -0.91
SYCP3-204ENST00000478139 PDE6BP35913 854 aa9.36□□□□□ -0.91
SYCP3-204ENST00000478139 SSH1Q8WYL5 1049 aa9.36□□□□□ -0.91
SYCP3-204ENST00000478139 ARHGEF1Q92888 912 aaKnown RBP9.36□□□□□ -0.91
SYCP3-204ENST00000478139 C22orf23Q9BZE7 217 aa9.36□□□□□ -0.91
SYCP3-204ENST00000478139 DDX19BQ9UMR2 479 aa9.36□□□□□ -0.91
SYCP3-204ENST00000478139 SLIT3O75094 1523 aa9.36□□□□□ -0.91
SYCP3-204ENST00000478139 SERPINB2P05120 415 aa9.36□□□□□ -0.91
SYCP3-204ENST00000478139 L1TD1Q5T7N2 865 aaKnown RBP9.36□□□□□ -0.91
SYCP3-204ENST00000478139 RC3H1Q5TC82 1133 aaKnown RBP9.36□□□□□ -0.91
SYCP3-204ENST00000478139 PLBD2Q8NHP8 589 aa9.36□□□□□ -0.91
SYCP3-204ENST00000478139 MTFR1LQ9H019 292 aa9.36□□□□□ -0.91
SYCP3-204ENST00000478139 IFIT5Q13325 482 aaKnown RBP9.36□□□□□ -0.91
SYCP3-204ENST00000478139 CCDC152Q4G0S7 254 aa9.36□□□□□ -0.91
SYCP3-204ENST00000478139 XRCC6P12956 609 aaKnown RBP eCLIP9.35□□□□□ -0.91
SYCP3-204ENST00000478139 MCM4P33991 863 aa9.35□□□□□ -0.91
SYCP3-204ENST00000478139 ALDH1L2Q3SY69 923 aa9.35□□□□□ -0.91
SYCP3-204ENST00000478139 RGS12O14924 1447 aa9.35□□□□□ -0.91
SYCP3-204ENST00000478139 TRIM27P14373 513 aa9.35□□□□□ -0.91
SYCP3-204ENST00000478139 C2CD5Q86YS7 1000 aa9.35□□□□□ -0.91
SYCP3-204ENST00000478139 TSPYL6Q8N831 410 aa9.35□□□□□ -0.91
SYCP3-204ENST00000478139 CYP19A1P11511 503 aaPredicted RBP9.35□□□□□ -0.91
SYCP3-204ENST00000478139 AAMPQ13685 434 aa9.35□□□□□ -0.91
SYCP3-204ENST00000478139 GPATCH3Q96I76 525 aa9.35□□□□□ -0.91
SYCP3-204ENST00000478139 NARFQ9UHQ1 456 aa9.35□□□□□ -0.91
SYCP3-204ENST00000478139 NHSL1Q5SYE7 1610 aa9.35□□□□□ -0.91
SYCP3-204ENST00000478139 ANKRD18BA2A2Z9 1011 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 GOLGA6L3A6NEY3 463 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 ATF7IPQ6VMQ6 1270 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 ARHGAP27Q6ZUM4 889 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 JDP2Q8WYK2 163 aa9.34□□□□□ -0.91
SYCP3-204ENST00000478139 JARID2Q92833 1246 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms