RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 NBPF10Q6P3W6 841 aaKnown RBP18.47■□□□□ 0.55
PDE6D-204ENST00000477748 C2CD5Q86YS7 1000 aa18.47■□□□□ 0.55
PDE6D-204ENST00000477748 NBPF15Q8N660 670 aa18.47■□□□□ 0.55
PDE6D-204ENST00000477748 TTLL6Q8N841 843 aa18.47■□□□□ 0.55
PDE6D-204ENST00000477748 SETDB2Q96T68 719 aa18.47■□□□□ 0.55
PDE6D-204ENST00000477748 ZNF652Q9Y2D9 606 aa18.47■□□□□ 0.55
PDE6D-204ENST00000477748 DLEC1Q9Y238 1755 aa18.47■□□□□ 0.55
PDE6D-204ENST00000477748 KIF3CO14782 793 aa18.46■□□□□ 0.55
PDE6D-204ENST00000477748 PDE6BP35913 854 aa18.46■□□□□ 0.55
PDE6D-204ENST00000477748 CLEC4GQ6UXB4 293 aa18.46■□□□□ 0.55
PDE6D-204ENST00000477748 BRIP1Q9BX63 1249 aa18.46■□□□□ 0.55
PDE6D-204ENST00000477748 BCORQ6W2J9 1755 aa18.45■□□□□ 0.54
PDE6D-204ENST00000477748 PRR5LQ6MZQ0 368 aa18.45■□□□□ 0.54
PDE6D-204ENST00000477748 CNBD1Q8NA66 436 aa18.45■□□□□ 0.54
PDE6D-204ENST00000477748 ZC3H4Q9UPT8 1303 aaKnown RBP18.45■□□□□ 0.54
PDE6D-204ENST00000477748 CHL1O00533 1208 aa18.44■□□□□ 0.54
PDE6D-204ENST00000477748 RNF181Q9P0P0 153 aa18.44■□□□□ 0.54
PDE6D-204ENST00000477748 NPHP1O15259 732 aa18.43■□□□□ 0.54
PDE6D-204ENST00000477748 ST5P78524 1137 aa18.43■□□□□ 0.54
PDE6D-204ENST00000477748 NGEFQ8N5V2 710 aa18.43■□□□□ 0.54
PDE6D-204ENST00000477748 KDM2BQ8NHM5 1336 aa18.42■□□□□ 0.54
PDE6D-204ENST00000477748 MYL6BP14649 208 aa18.41■□□□□ 0.54
PDE6D-204ENST00000477748 EIF2S2P20042 333 aaKnown RBP18.41■□□□□ 0.54
PDE6D-204ENST00000477748 APLP1P51693 650 aa18.41■□□□□ 0.54
PDE6D-204ENST00000477748 CALD1Q05682 793 aaKnown RBP18.41■□□□□ 0.54
PDE6D-204ENST00000477748 CFAP44Q96MT7 982 aa18.41■□□□□ 0.54
PDE6D-204ENST00000477748 ANKRD31Q8N7Z5 1873 aa18.4■□□□□ 0.54
PDE6D-204ENST00000477748 TOMM70O94826 608 aa18.4■□□□□ 0.54
PDE6D-204ENST00000477748 LMNB1P20700 586 aa18.4■□□□□ 0.54
PDE6D-204ENST00000477748 RASSF7Q02833 373 aa18.4■□□□□ 0.54
PDE6D-204ENST00000477748 NBPF5PQ86XG9 351 aaPredicted RBP18.4■□□□□ 0.54
PDE6D-204ENST00000477748 DNAJC5GQ8N7S2 189 aa18.4■□□□□ 0.54
PDE6D-204ENST00000477748 ERBB4Q15303 1308 aa18.4■□□□□ 0.54
PDE6D-204ENST00000477748 KRT24Q2M2I5 525 aa18.39■□□□□ 0.53
PDE6D-204ENST00000477748 ZNF622Q969S3 477 aaKnown RBP eCLIP18.39■□□□□ 0.53
PDE6D-204ENST00000477748 NMRK2Q9NPI5 230 aa18.39■□□□□ 0.53
PDE6D-204ENST00000477748 GNAI1P63096 354 aa18.38■□□□□ 0.53
PDE6D-204ENST00000477748 STYK1Q6J9G0 422 aa18.38■□□□□ 0.53
PDE6D-204ENST00000477748 CNKSR1Q969H4 720 aa18.38■□□□□ 0.53
PDE6D-204ENST00000477748 MBIPQ9NS73 344 aa18.38■□□□□ 0.53
PDE6D-204ENST00000477748 COL11A2P13942 1736 aaPredicted RBP18.37■□□□□ 0.53
PDE6D-204ENST00000477748 KIF6Q6ZMV9 814 aa18.37■□□□□ 0.53
PDE6D-204ENST00000477748 CCDC24Q8N4L8 307 aa18.37■□□□□ 0.53
PDE6D-204ENST00000477748 NECTIN2Q92692 538 aa18.37■□□□□ 0.53
PDE6D-204ENST00000477748 IFT57Q9NWB7 429 aa18.37■□□□□ 0.53
PDE6D-204ENST00000477748 NIP7Q9Y221 180 aaKnown RBP eCLIP18.37■□□□□ 0.53
PDE6D-204ENST00000477748 SBF1O95248 1867 aa18.37■□□□□ 0.53
PDE6D-204ENST00000477748 NFKBIEO00221 500 aa18.36■□□□□ 0.53
PDE6D-204ENST00000477748 ZNF853P0CG23 659 aa18.36■□□□□ 0.53
PDE6D-204ENST00000477748 SRGNP10124 158 aa18.36■□□□□ 0.53
PDE6D-204ENST00000477748 NUP98P52948 1817 aa18.36■□□□□ 0.53
PDE6D-204ENST00000477748 HLFQ16534 295 aa18.36■□□□□ 0.53
PDE6D-204ENST00000477748 SOGA3Q5TF21 947 aa18.36■□□□□ 0.53
PDE6D-204ENST00000477748 TPTE2Q6XPS3 522 aa18.36■□□□□ 0.53
PDE6D-204ENST00000477748 MAP3K15Q6ZN16 1313 aa18.36■□□□□ 0.53
PDE6D-204ENST00000477748 TTLL7Q6ZT98 887 aa18.36■□□□□ 0.53
PDE6D-204ENST00000477748 C16orf71Q8IYS4 520 aaPredicted RBP18.36■□□□□ 0.53
PDE6D-204ENST00000477748 FAM9BQ8IZU0 186 aa18.36■□□□□ 0.53
PDE6D-204ENST00000477748 MASTLQ96GX5 879 aa18.36■□□□□ 0.53
PDE6D-204ENST00000477748 ERVV-1B6SEH8 477 aa18.35■□□□□ 0.53
PDE6D-204ENST00000477748 ANXA1P04083 346 aa18.35■□□□□ 0.53
PDE6D-204ENST00000477748 RBM46Q8TBY0 533 aaKnown RBP18.35■□□□□ 0.53
PDE6D-204ENST00000477748 LTBP3Q9NS15 1303 aa18.34■□□□□ 0.53
PDE6D-204ENST00000477748 HOXB7P09629 217 aa18.34■□□□□ 0.53
PDE6D-204ENST00000477748 PDIA6Q15084 440 aa18.34■□□□□ 0.53
PDE6D-204ENST00000477748 CCDC27Q2M243 656 aa18.34■□□□□ 0.53
PDE6D-204ENST00000477748 PROSER3Q2NL68 480 aa18.34■□□□□ 0.53
PDE6D-204ENST00000477748 PRPF40BQ6NWY9 871 aaKnown RBP18.34■□□□□ 0.53
PDE6D-204ENST00000477748 ZBTB3Q9H5J0 574 aa18.34■□□□□ 0.53
PDE6D-204ENST00000477748 TNRC6CQ9HCJ0 1690 aaKnown RBP18.34■□□□□ 0.53
PDE6D-204ENST00000477748 WDR90Q96KV7 1748 aa18.33■□□□□ 0.52
PDE6D-204ENST00000477748 KLRG2A4D1S0 409 aaPredicted RBP18.33■□□□□ 0.52
PDE6D-204ENST00000477748 C21orf2O43822 256 aa18.33■□□□□ 0.52
PDE6D-204ENST00000477748 HDGFL1Q5TGJ6 251 aa18.33■□□□□ 0.52
PDE6D-204ENST00000477748 DUSP27Q5VZP5 1158 aa18.33■□□□□ 0.52
PDE6D-204ENST00000477748 WWC1Q8IX03 1113 aa18.33■□□□□ 0.52
PDE6D-204ENST00000477748 FAM177BA6PVY3 158 aa18.32■□□□□ 0.52
PDE6D-204ENST00000477748 NPR1P16066 1061 aa18.32■□□□□ 0.52
PDE6D-204ENST00000477748 PRELPP51888 382 aa18.32■□□□□ 0.52
PDE6D-204ENST00000477748 LRP10Q7Z4F1 713 aa18.32■□□□□ 0.52
PDE6D-204ENST00000477748 NYXQ9GZU5 481 aa18.32■□□□□ 0.52
PDE6D-204ENST00000477748 TAOK3Q9H2K8 898 aa18.32■□□□□ 0.52
PDE6D-204ENST00000477748 DDX21Q9NR30 783 aaKnown RBP eCLIP18.32■□□□□ 0.52
PDE6D-204ENST00000477748 IBTKQ9P2D0 1353 aaPredicted RBP18.31■□□□□ 0.52
PDE6D-204ENST00000477748 GLTPD2A6NH11 291 aa18.31■□□□□ 0.52
PDE6D-204ENST00000477748 CAPN15O75808 1086 aa18.31■□□□□ 0.52
PDE6D-204ENST00000477748 FSTL1Q12841 308 aa18.31■□□□□ 0.52
PDE6D-204ENST00000477748 NCBP3Q53F19 620 aaKnown RBP18.31■□□□□ 0.52
PDE6D-204ENST00000477748 COL13A1Q5TAT6 717 aaPredicted RBP18.31■□□□□ 0.52
PDE6D-204ENST00000477748 CHPF2Q9P2E5 772 aa18.31■□□□□ 0.52
PDE6D-204ENST00000477748 SALL2Q9Y467 1007 aaPredicted RBP18.31■□□□□ 0.52
PDE6D-204ENST00000477748 ARFGEF2Q9Y6D5 1785 aa18.3■□□□□ 0.52
PDE6D-204ENST00000477748 TIAM2Q8IVF5 1701 aa18.3■□□□□ 0.52
PDE6D-204ENST00000477748 ELL2O00472 640 aaPredicted RBP18.3■□□□□ 0.52
PDE6D-204ENST00000477748 GTF2E1P29083 439 aaPredicted RBP18.3■□□□□ 0.52
PDE6D-204ENST00000477748 AIMP1Q12904 312 aaKnown RBP18.3■□□□□ 0.52
PDE6D-204ENST00000477748 COPS6Q7L5N1 327 aa18.3■□□□□ 0.52
PDE6D-204ENST00000477748 XAGE3Q8WTP9 111 aa18.3■□□□□ 0.52
PDE6D-204ENST00000477748 RRAGCQ9HB90 399 aa18.3■□□□□ 0.52
PDE6D-204ENST00000477748 ZNF219Q9P2Y4 722 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms