RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 PXDNLA1KZ92 1463 aa16.01■□□□□ 0.15
CLCNKA-205ENST00000477360 BRIP1Q9BX63 1249 aa16■□□□□ 0.15
CLCNKA-205ENST00000477360 EIF2S2P20042 333 aaKnown RBP15.99■□□□□ 0.15
CLCNKA-205ENST00000477360 GPR162Q16538 588 aa15.99■□□□□ 0.15
CLCNKA-205ENST00000477360 HSP90AB3PQ58FF7 597 aa15.99■□□□□ 0.15
CLCNKA-205ENST00000477360 GIGYF2Q6Y7W6 1299 aaKnown RBP15.99■□□□□ 0.15
CLCNKA-205ENST00000477360 MYH16Q9H6N6 1097 aa15.99■□□□□ 0.15
CLCNKA-205ENST00000477360 RNF123Q5XPI4 1314 aa15.98■□□□□ 0.15
CLCNKA-205ENST00000477360 ZNF521Q96K83 1311 aa15.98■□□□□ 0.15
CLCNKA-205ENST00000477360 MYL6BP14649 208 aa15.98■□□□□ 0.15
CLCNKA-205ENST00000477360 PDE6BP35913 854 aa15.98■□□□□ 0.15
CLCNKA-205ENST00000477360 PIP4K2AP48426 406 aaPredicted RBP15.98■□□□□ 0.15
CLCNKA-205ENST00000477360 TPTE2Q6XPS3 522 aa15.98■□□□□ 0.15
CLCNKA-205ENST00000477360 KRT24Q2M2I5 525 aa15.97■□□□□ 0.15
CLCNKA-205ENST00000477360 PARP10Q53GL7 1025 aa15.97■□□□□ 0.15
CLCNKA-205ENST00000477360 CCDC30Q5VVM6 783 aa15.97■□□□□ 0.15
CLCNKA-205ENST00000477360 PRR5LQ6MZQ0 368 aa15.97■□□□□ 0.15
CLCNKA-205ENST00000477360 CNBD1Q8NA66 436 aa15.97■□□□□ 0.15
CLCNKA-205ENST00000477360 NYXQ9GZU5 481 aa15.97■□□□□ 0.15
CLCNKA-205ENST00000477360 PIM2Q9P1W9 311 aa15.97■□□□□ 0.15
CLCNKA-205ENST00000477360 RIC1Q4ADV7 1423 aa15.96■□□□□ 0.15
CLCNKA-205ENST00000477360 KCNA3P22001 575 aa15.96■□□□□ 0.15
CLCNKA-205ENST00000477360 ST5P78524 1137 aa15.96■□□□□ 0.15
CLCNKA-205ENST00000477360 GOLGA2Q08379 1002 aa15.96■□□□□ 0.15
CLCNKA-205ENST00000477360 TTLL7Q6ZT98 887 aa15.96■□□□□ 0.15
CLCNKA-205ENST00000477360 ZNF34Q8IZ26 560 aa15.96■□□□□ 0.15
CLCNKA-205ENST00000477360 CHPF2Q9P2E5 772 aa15.96■□□□□ 0.15
CLCNKA-205ENST00000477360 NIP7Q9Y221 180 aaKnown RBP eCLIP15.96■□□□□ 0.15
CLCNKA-205ENST00000477360 KIAA1551Q9HCM1 1747 aa15.95■□□□□ 0.14
CLCNKA-205ENST00000477360 KLRG2A4D1S0 409 aaPredicted RBP15.95■□□□□ 0.14
CLCNKA-205ENST00000477360 BICDL1Q6ZP65 573 aa15.95■□□□□ 0.14
CLCNKA-205ENST00000477360 COPS6Q7L5N1 327 aa15.95■□□□□ 0.14
CLCNKA-205ENST00000477360 NBPF5PQ86XG9 351 aaPredicted RBP15.95■□□□□ 0.14
CLCNKA-205ENST00000477360 C8orf58Q8NAV2 365 aa15.95■□□□□ 0.14
CLCNKA-205ENST00000477360 FANCIQ9NVI1 1328 aa15.94■□□□□ 0.14
CLCNKA-205ENST00000477360 H0YIN7 160 aa15.94■□□□□ 0.14
CLCNKA-205ENST00000477360 DPEP1P16444 411 aa15.94■□□□□ 0.14
CLCNKA-205ENST00000477360 HLFQ16534 295 aa15.94■□□□□ 0.14
CLCNKA-205ENST00000477360 PROSER3Q2NL68 480 aa15.94■□□□□ 0.14
CLCNKA-205ENST00000477360 PLBD2Q8NHP8 589 aa15.94■□□□□ 0.14
CLCNKA-205ENST00000477360 XAGE3Q8WTP9 111 aa15.94■□□□□ 0.14
CLCNKA-205ENST00000477360 AFDNP55196 1824 aaKnown RBP15.94■□□□□ 0.14
CLCNKA-205ENST00000477360 A0A0G2JLW4 131 aa15.93■□□□□ 0.14
CLCNKA-205ENST00000477360 YBX3P16989 372 aaKnown RBP eCLIP15.93■□□□□ 0.14
CLCNKA-205ENST00000477360 TRIM28Q13263 835 aaKnown RBP15.93■□□□□ 0.14
CLCNKA-205ENST00000477360 TWISTNBQ3B726 338 aaPredicted RBP15.93■□□□□ 0.14
CLCNKA-205ENST00000477360 ANKRD13DQ6ZTN6 518 aa15.93■□□□□ 0.14
CLCNKA-205ENST00000477360 TSR2Q969E8 191 aaKnown RBP15.93■□□□□ 0.14
CLCNKA-205ENST00000477360 E9PSI1 815 aa15.92■□□□□ 0.14
CLCNKA-205ENST00000477360 DALRD3Q5D0E6 543 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-205ENST00000477360 PPP1R42Q7Z4L9 355 aa15.92■□□□□ 0.14
CLCNKA-205ENST00000477360 STK31Q9BXU1 1019 aa15.92■□□□□ 0.14
CLCNKA-205ENST00000477360 ZBTB3Q9H5J0 574 aa15.92■□□□□ 0.14
CLCNKA-205ENST00000477360 DDX58O95786 925 aaKnown RBP15.91■□□□□ 0.14
CLCNKA-205ENST00000477360 TCIRG1Q13488 830 aa15.91■□□□□ 0.14
CLCNKA-205ENST00000477360 STYK1Q6J9G0 422 aa15.91■□□□□ 0.14
CLCNKA-205ENST00000477360 ZNF428Q96B54 188 aa15.91■□□□□ 0.14
CLCNKA-205ENST00000477360 NPHP1O15259 732 aa15.9■□□□□ 0.14
CLCNKA-205ENST00000477360 SLC10A5Q5PT55 438 aa15.9■□□□□ 0.14
CLCNKA-205ENST00000477360 C2CD5Q86YS7 1000 aa15.9■□□□□ 0.14
CLCNKA-205ENST00000477360 TTLL6Q8N841 843 aa15.9■□□□□ 0.14
CLCNKA-205ENST00000477360 BRCA1P38398 1863 aaKnown RBP15.9■□□□□ 0.14
CLCNKA-205ENST00000477360 NUP98P52948 1817 aa15.89■□□□□ 0.13
CLCNKA-205ENST00000477360 VAMP4O75379 141 aa15.89■□□□□ 0.13
CLCNKA-205ENST00000477360 ANXA1P04083 346 aa15.89■□□□□ 0.13
CLCNKA-205ENST00000477360 SRGNP10124 158 aa15.89■□□□□ 0.13
CLCNKA-205ENST00000477360 TSPYL6Q8N831 410 aa15.89■□□□□ 0.13
CLCNKA-205ENST00000477360 NECTIN2Q92692 538 aa15.89■□□□□ 0.13
CLCNKA-205ENST00000477360 CNKSR1Q969H4 720 aa15.89■□□□□ 0.13
CLCNKA-205ENST00000477360 DLEC1Q9Y238 1755 aa15.89■□□□□ 0.13
CLCNKA-205ENST00000477360 UBN2Q6ZU65 1347 aa15.89■□□□□ 0.13
CLCNKA-205ENST00000477360 ELL2O00472 640 aaPredicted RBP15.88■□□□□ 0.13
CLCNKA-205ENST00000477360 NTSR2O95665 410 aa15.88■□□□□ 0.13
CLCNKA-205ENST00000477360 NPR1P16066 1061 aa15.88■□□□□ 0.13
CLCNKA-205ENST00000477360 GTF2E1P29083 439 aaPredicted RBP15.88■□□□□ 0.13
CLCNKA-205ENST00000477360 CHRNA5P30532 468 aa15.88■□□□□ 0.13
CLCNKA-205ENST00000477360 AIMP1Q12904 312 aaKnown RBP15.88■□□□□ 0.13
CLCNKA-205ENST00000477360 CRY2Q49AN0 593 aa15.88■□□□□ 0.13
CLCNKA-205ENST00000477360 PELP1Q8IZL8 1130 aaKnown RBP15.88■□□□□ 0.13
CLCNKA-205ENST00000477360 MASTLQ96GX5 879 aa15.88■□□□□ 0.13
CLCNKA-205ENST00000477360 ISCA1Q9BUE6 129 aa15.88■□□□□ 0.13
CLCNKA-205ENST00000477360 UTP14AQ9BVJ6 771 aaKnown RBP15.88■□□□□ 0.13
CLCNKA-205ENST00000477360 BCS1LQ9Y276 419 aa15.88■□□□□ 0.13
CLCNKA-205ENST00000477360 HSP90B1P14625 803 aaKnown RBP15.87■□□□□ 0.13
CLCNKA-205ENST00000477360 HOXA10P31260 410 aaPredicted RBP15.87■□□□□ 0.13
CLCNKA-205ENST00000477360 SOGA3Q5TF21 947 aa15.87■□□□□ 0.13
CLCNKA-205ENST00000477360 NLRP10Q86W26 655 aa15.87■□□□□ 0.13
CLCNKA-205ENST00000477360 SALL2Q9Y467 1007 aaPredicted RBP15.87■□□□□ 0.13
CLCNKA-205ENST00000477360 UTRNP46939 3433 aa15.86■□□□□ 0.13
CLCNKA-205ENST00000477360 N4BP2Q86UW6 1770 aaPredicted RBP15.86■□□□□ 0.13
CLCNKA-205ENST00000477360 CT47B1P0C2W7 299 aaPredicted RBP15.86■□□□□ 0.13
CLCNKA-205ENST00000477360 YY1P25490 414 aa15.86■□□□□ 0.13
CLCNKA-205ENST00000477360 ALDH1B1P30837 517 aa15.86■□□□□ 0.13
CLCNKA-205ENST00000477360 EXOSC9Q06265 439 aaKnown RBP15.86■□□□□ 0.13
CLCNKA-205ENST00000477360 SLFN5Q08AF3 891 aa15.86■□□□□ 0.13
CLCNKA-205ENST00000477360 SUSD4Q5VX71 490 aa15.86■□□□□ 0.13
CLCNKA-205ENST00000477360 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
CLCNKA-205ENST00000477360 ARFGEF1Q9Y6D6 1849 aa15.86■□□□□ 0.13
CLCNKA-205ENST00000477360 ANKRD31Q8N7Z5 1873 aa15.85■□□□□ 0.13
CLCNKA-205ENST00000477360 GPTP24298 496 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms