RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 PI4KAP2A4QPH2 592 aa20.08■□□□□ 0.81
TMEM53-208ENST00000476724 PI4KAP1Q8N8J0 262 aa20.08■□□□□ 0.81
TMEM53-208ENST00000476724 CHMLP26374 656 aa20.07■□□□□ 0.8
TMEM53-208ENST00000476724 MCM2P49736 904 aa20.07■□□□□ 0.8
TMEM53-208ENST00000476724 ANAPC15P60006 121 aa20.07■□□□□ 0.8
TMEM53-208ENST00000476724 TTC5Q8N0Z6 440 aa20.07■□□□□ 0.8
TMEM53-208ENST00000476724 TRIM6-TRIM34B2RNG4 842 aa20.07■□□□□ 0.8
TMEM53-208ENST00000476724 SURF6O75683 361 aaKnown RBP20.07■□□□□ 0.8
TMEM53-208ENST00000476724 KIF1BPQ96EK5 621 aa20.07■□□□□ 0.8
TMEM53-208ENST00000476724 GZF1Q9H116 711 aaPredicted RBP20.07■□□□□ 0.8
TMEM53-208ENST00000476724 PDIA6Q15084 440 aa20.06■□□□□ 0.8
TMEM53-208ENST00000476724 ERVV-2B6SEH9 535 aa20.06■□□□□ 0.8
TMEM53-208ENST00000476724 ALDH1L1O75891 902 aa20.06■□□□□ 0.8
TMEM53-208ENST00000476724 PAPPAQ13219 1627 aa20.06■□□□□ 0.8
TMEM53-208ENST00000476724 UBR2Q8IWV8 1755 aa20.06■□□□□ 0.8
TMEM53-208ENST00000476724 RILPL2Q969X0 211 aa20.06■□□□□ 0.8
TMEM53-208ENST00000476724 SRGAP3O43295 1099 aa20.05■□□□□ 0.8
TMEM53-208ENST00000476724 RHPN1Q8TCX5 695 aa20.05■□□□□ 0.8
TMEM53-208ENST00000476724 IL17RAQ96F46 866 aa20.05■□□□□ 0.8
TMEM53-208ENST00000476724 USP16Q9Y5T5 823 aa20.05■□□□□ 0.8
TMEM53-208ENST00000476724 ADCY9O60503 1353 aa20.04■□□□□ 0.8
TMEM53-208ENST00000476724 NBPF7P0C2Y1 421 aaPredicted RBP20.04■□□□□ 0.8
TMEM53-208ENST00000476724 SSFA2P28290 1259 aa20.04■□□□□ 0.8
TMEM53-208ENST00000476724 MRE11P49959 708 aa20.04■□□□□ 0.8
TMEM53-208ENST00000476724 MTX1Q13505 466 aa20.04■□□□□ 0.8
TMEM53-208ENST00000476724 TSHZ3Q63HK5 1081 aa20.04■□□□□ 0.8
TMEM53-208ENST00000476724 FMNL2Q96PY5 1086 aa20.04■□□□□ 0.8
TMEM53-208ENST00000476724 ITGB4P16144 1822 aa20.03■□□□□ 0.8
TMEM53-208ENST00000476724 CYP2E1P05181 493 aaPredicted RBP20.03■□□□□ 0.8
TMEM53-208ENST00000476724 SNRPA1P09661 255 aaKnown RBP20.03■□□□□ 0.8
TMEM53-208ENST00000476724 XRCC6P12956 609 aaKnown RBP eCLIP20.03■□□□□ 0.8
TMEM53-208ENST00000476724 KSR2Q6VAB6 950 aa20.03■□□□□ 0.8
TMEM53-208ENST00000476724 IL1RAPL2Q9NP60 686 aa20.03■□□□□ 0.8
TMEM53-208ENST00000476724 DDX21Q9NR30 783 aaKnown RBP eCLIP20.03■□□□□ 0.8
TMEM53-208ENST00000476724 HYPKQ9NX55 129 aa20.03■□□□□ 0.8
TMEM53-208ENST00000476724 LAMB4A4D0S4 1761 aa20.03■□□□□ 0.8
TMEM53-208ENST00000476724 BAG4O95429 457 aaKnown RBP20.02■□□□□ 0.8
TMEM53-208ENST00000476724 PIP4K2AP48426 406 aaPredicted RBP20.02■□□□□ 0.8
TMEM53-208ENST00000476724 NWD2Q9ULI1 1742 aa20.02■□□□□ 0.79
TMEM53-208ENST00000476724 KCPQ6ZWJ8 1503 aa20.01■□□□□ 0.79
TMEM53-208ENST00000476724 MYL6BP14649 208 aa20.01■□□□□ 0.79
TMEM53-208ENST00000476724 SLIT2O94813 1529 aa20.01■□□□□ 0.79
TMEM53-208ENST00000476724 SPATA31A1Q5TZJ5 1347 aa20.01■□□□□ 0.79
TMEM53-208ENST00000476724 NEK4P51957 841 aa20■□□□□ 0.79
TMEM53-208ENST00000476724 AIMP1Q12904 312 aaKnown RBP20■□□□□ 0.79
TMEM53-208ENST00000476724 ANO2Q9NQ90 1003 aa20■□□□□ 0.79
TMEM53-208ENST00000476724 AK9Q5TCS8 1911 aa20■□□□□ 0.79
TMEM53-208ENST00000476724 NUTM1Q86Y26 1132 aa19.99■□□□□ 0.79
TMEM53-208ENST00000476724 FAM43AQ8N2R8 423 aa19.99■□□□□ 0.79
TMEM53-208ENST00000476724 MAP3K2Q9Y2U5 619 aa19.99■□□□□ 0.79
TMEM53-208ENST00000476724 USP42Q9H9J4 1324 aaKnown RBP19.99■□□□□ 0.79
TMEM53-208ENST00000476724 DDX58O95786 925 aaKnown RBP19.99■□□□□ 0.79
TMEM53-208ENST00000476724 PI4K2BQ8TCG2 481 aa19.99■□□□□ 0.79
TMEM53-208ENST00000476724 CERKQ8TCT0 537 aa19.99■□□□□ 0.79
TMEM53-208ENST00000476724 C9orf78Q9NZ63 289 aaPredicted RBP19.99■□□□□ 0.79
TMEM53-208ENST00000476724 TTC41PQ6P2S7 1318 aa19.99■□□□□ 0.79
TMEM53-208ENST00000476724 KAT6BQ8WYB5 2073 aa19.98■□□□□ 0.79
TMEM53-208ENST00000476724 EXOC5O00471 708 aa19.98■□□□□ 0.79
TMEM53-208ENST00000476724 CNTROBQ8N137 903 aa19.98■□□□□ 0.79
TMEM53-208ENST00000476724 PTCD1O75127 700 aaKnown RBP19.98■□□□□ 0.79
TMEM53-208ENST00000476724 KLHL40Q2TBA0 621 aa19.98■□□□□ 0.79
TMEM53-208ENST00000476724 LRP10Q7Z4F1 713 aa19.98■□□□□ 0.79
TMEM53-208ENST00000476724 UNC5CLQ8IV45 518 aa19.98■□□□□ 0.79
TMEM53-208ENST00000476724 RTN4Q9NQC3 1192 aaKnown RBP19.98■□□□□ 0.79
TMEM53-208ENST00000476724 TMOD3Q9NYL9 352 aa19.98■□□□□ 0.79
TMEM53-208ENST00000476724 TNS2Q63HR2 1409 aa19.97■□□□□ 0.79
TMEM53-208ENST00000476724 JCADQ9P266 1359 aa19.97■□□□□ 0.79
TMEM53-208ENST00000476724 ERC1Q8IUD2 1116 aa19.97■□□□□ 0.79
TMEM53-208ENST00000476724 LINS1Q8NG48 757 aa19.96■□□□□ 0.79
TMEM53-208ENST00000476724 PIGBQ92521 554 aa19.96■□□□□ 0.79
TMEM53-208ENST00000476724 GRPEL1Q9HAV7 217 aa19.96■□□□□ 0.79
TMEM53-208ENST00000476724 SPATA31A5Q5VU36 1347 aa19.96■□□□□ 0.79
TMEM53-208ENST00000476724 SPATA31A7Q8IWB4 1347 aa19.96■□□□□ 0.79
TMEM53-208ENST00000476724 XAGE3Q8WTP9 111 aa19.96■□□□□ 0.79
TMEM53-208ENST00000476724 INTS4Q96HW7 963 aaKnown RBP19.96■□□□□ 0.79
TMEM53-208ENST00000476724 GLRX3O76003 335 aaKnown RBP19.95■□□□□ 0.78
TMEM53-208ENST00000476724 CUL4AQ13619 759 aa19.95■□□□□ 0.78
TMEM53-208ENST00000476724 COPS6Q7L5N1 327 aa19.95■□□□□ 0.78
TMEM53-208ENST00000476724 CLASRPQ8N2M8 674 aaKnown RBP19.95■□□□□ 0.78
TMEM53-208ENST00000476724 TMX3Q96JJ7 454 aa19.95■□□□□ 0.78
TMEM53-208ENST00000476724 UTYO14607 1347 aa19.95■□□□□ 0.78
TMEM53-208ENST00000476724 HSPA4P34932 840 aa19.95■□□□□ 0.78
TMEM53-208ENST00000476724 OS9Q13438 667 aaPredicted RBP19.95■□□□□ 0.78
TMEM53-208ENST00000476724 ZGPATQ8N5A5 531 aaKnown RBP19.95■□□□□ 0.78
TMEM53-208ENST00000476724 C8orf37Q96NL8 207 aa19.95■□□□□ 0.78
TMEM53-208ENST00000476724 CCDC9Q9Y3X0 531 aaKnown RBP19.95■□□□□ 0.78
TMEM53-208ENST00000476724 DOT1LQ8TEK3 1739 aa19.94■□□□□ 0.78
TMEM53-208ENST00000476724 ASAP1Q9ULH1 1129 aa19.94■□□□□ 0.78
TMEM53-208ENST00000476724 THRAP3Q9Y2W1 955 aaKnown RBP19.94■□□□□ 0.78
TMEM53-208ENST00000476724 DDX49Q9Y6V7 483 aaKnown RBP19.94■□□□□ 0.78
TMEM53-208ENST00000476724 LRP6O75581 1613 aa19.94■□□□□ 0.78
TMEM53-208ENST00000476724 CWF19L2Q2TBE0 894 aaKnown RBP19.93■□□□□ 0.78
TMEM53-208ENST00000476724 PALD1Q9ULE6 856 aa19.93■□□□□ 0.78
TMEM53-208ENST00000476724 NBPF26B4DH59 902 aa19.93■□□□□ 0.78
TMEM53-208ENST00000476724 SGSM2O43147 1006 aa19.93■□□□□ 0.78
TMEM53-208ENST00000476724 NBPF14Q5TI25 921 aa19.93■□□□□ 0.78
TMEM53-208ENST00000476724 NBPF10Q6P3W6 841 aaKnown RBP19.93■□□□□ 0.78
TMEM53-208ENST00000476724 NBPF15Q8N660 670 aa19.93■□□□□ 0.78
TMEM53-208ENST00000476724 GPATCH3Q96I76 525 aa19.93■□□□□ 0.78
TMEM53-208ENST00000476724 GRM8O00222 908 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms