RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 TXNDC2Q86VQ3 553 aa6.33□□□□□ -1.4
VPS13D-206ENST00000476045 SEPT12Q8IYM1 358 aa6.33□□□□□ -1.4
VPS13D-206ENST00000476045 LINC00528Q8N1L1 170 aa6.33□□□□□ -1.4
VPS13D-206ENST00000476045 CHIC2Q9UKJ5 165 aa6.33□□□□□ -1.4
VPS13D-206ENST00000476045 PHLPP1O60346 1717 aa6.33□□□□□ -1.4
VPS13D-206ENST00000476045 HFM1A2PYH4 1435 aa6.33□□□□□ -1.4
VPS13D-206ENST00000476045 FAM135BQ49AJ0 1406 aa6.33□□□□□ -1.4
VPS13D-206ENST00000476045 MSH6P52701 1360 aa6.32□□□□□ -1.4
VPS13D-206ENST00000476045 AHDC1Q5TGY3 1603 aaPredicted RBP6.32□□□□□ -1.4
VPS13D-206ENST00000476045 ZBBXA8MT70 800 aa6.32□□□□□ -1.4
VPS13D-206ENST00000476045 TERTO14746 1132 aaKnown RBP6.32□□□□□ -1.4
VPS13D-206ENST00000476045 DHX9Q08211 1270 aaKnown RBP6.32□□□□□ -1.4
VPS13D-206ENST00000476045 SCARF1Q14162 830 aa6.32□□□□□ -1.4
VPS13D-206ENST00000476045 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.32□□□□□ -1.4
VPS13D-206ENST00000476045 SHPRHQ149N8 1683 aa6.32□□□□□ -1.4
VPS13D-206ENST00000476045 PRAG1Q86YV5 1406 aa6.32□□□□□ -1.4
VPS13D-206ENST00000476045 TMEM94Q12767 1356 aa6.31□□□□□ -1.4
VPS13D-206ENST00000476045 PPLO60437 1756 aa6.31□□□□□ -1.4
VPS13D-206ENST00000476045 NEXMIFQ5QGS0 1516 aa6.31□□□□□ -1.4
VPS13D-206ENST00000476045 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-206ENST00000476045 PPP1R15AO75807 674 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-206ENST00000476045 FBXO45P0C2W1 286 aa6.31□□□□□ -1.4
VPS13D-206ENST00000476045 KCNA6P17658 529 aa6.31□□□□□ -1.4
VPS13D-206ENST00000476045 LTKP29376 864 aa6.31□□□□□ -1.4
VPS13D-206ENST00000476045 IDI1Q13907 227 aa6.31□□□□□ -1.4
VPS13D-206ENST00000476045 PGPEP1Q9NXJ5 209 aa6.31□□□□□ -1.4
VPS13D-206ENST00000476045 COL16A1Q07092 1604 aaPredicted RBP6.31□□□□□ -1.4
VPS13D-206ENST00000476045 NUP155O75694 1391 aa6.31□□□□□ -1.4
VPS13D-206ENST00000476045 IFT172Q9UG01 1749 aa6.3□□□□□ -1.4
VPS13D-206ENST00000476045 SOS2Q07890 1332 aaPredicted RBP6.3□□□□□ -1.4
VPS13D-206ENST00000476045 LAMC1P11047 1609 aa6.3□□□□□ -1.4
VPS13D-206ENST00000476045 NHSL1Q5SYE7 1610 aa6.3□□□□□ -1.4
VPS13D-206ENST00000476045 H3BM21 787 aa6.3□□□□□ -1.4
VPS13D-206ENST00000476045 APBB1O00213 710 aa6.3□□□□□ -1.4
VPS13D-206ENST00000476045 WFS1O76024 890 aa6.3□□□□□ -1.4
VPS13D-206ENST00000476045 VSIG8P0DPA2 414 aa6.3□□□□□ -1.4
VPS13D-206ENST00000476045 CCDC125Q86Z20 511 aa6.3□□□□□ -1.4
VPS13D-206ENST00000476045 PURBQ96QR8 312 aaKnown RBP6.3□□□□□ -1.4
VPS13D-206ENST00000476045 TSEN34Q9BSV6 310 aaKnown RBP6.3□□□□□ -1.4
VPS13D-206ENST00000476045 NXF1Q9UBU9 619 aaKnown RBP6.3□□□□□ -1.4
VPS13D-206ENST00000476045 NDUFB9Q9Y6M9 179 aa6.3□□□□□ -1.4
VPS13D-206ENST00000476045 NAIPQ13075 1403 aa6.3□□□□□ -1.4
VPS13D-206ENST00000476045 ADAMTS13Q76LX8 1427 aa6.3□□□□□ -1.4
VPS13D-206ENST00000476045 KNDC1Q76NI1 1749 aa6.3□□□□□ -1.4
VPS13D-206ENST00000476045 NALCNQ8IZF0 1738 aa6.3□□□□□ -1.4
VPS13D-206ENST00000476045 ACIN1Q9UKV3 1341 aaKnown RBP6.29□□□□□ -1.4
VPS13D-206ENST00000476045 SPINT1O43278 529 aa6.29□□□□□ -1.4
VPS13D-206ENST00000476045 LILRA1O75019 489 aa6.29□□□□□ -1.4
VPS13D-206ENST00000476045 HSPA1LP34931 641 aa6.29□□□□□ -1.4
VPS13D-206ENST00000476045 PTCH1Q13635 1447 aa6.29□□□□□ -1.4
VPS13D-206ENST00000476045 MCCD1P59942 119 aaPredicted RBP6.28□□□□□ -1.4
VPS13D-206ENST00000476045 PIP4K2BP78356 416 aa6.28□□□□□ -1.4
VPS13D-206ENST00000476045 NR1H3Q13133 447 aa6.28□□□□□ -1.4
VPS13D-206ENST00000476045 SNRKQ9NRH2 765 aa6.28□□□□□ -1.4
VPS13D-206ENST00000476045 CDC42BPGQ6DT37 1551 aa6.27□□□□□ -1.41
VPS13D-206ENST00000476045 DZIP3Q86Y13 1208 aaKnown RBP6.27□□□□□ -1.41
VPS13D-206ENST00000476045 KDF1Q8NAX2 398 aaPredicted RBP6.27□□□□□ -1.41
VPS13D-206ENST00000476045 ZNF592Q92610 1267 aa6.27□□□□□ -1.41
VPS13D-206ENST00000476045 TBX22Q9Y458 520 aa6.27□□□□□ -1.41
VPS13D-206ENST00000476045 ADGRL3Q9HAR2 1447 aa6.26□□□□□ -1.41
VPS13D-206ENST00000476045 ASXL1Q8IXJ9 1541 aa6.26□□□□□ -1.41
VPS13D-206ENST00000476045 ERVH48-1M5A8F1 160 aa6.26□□□□□ -1.41
VPS13D-206ENST00000476045 CBLBQ13191 982 aa6.26□□□□□ -1.41
VPS13D-206ENST00000476045 ZNF784Q8NCA9 323 aaPredicted RBP6.26□□□□□ -1.41
VPS13D-206ENST00000476045 DNMT3LQ9UJW3 386 aa6.26□□□□□ -1.41
VPS13D-206ENST00000476045 TIMELESSQ9UNS1 1208 aa6.26□□□□□ -1.41
VPS13D-206ENST00000476045 UPP2O95045 317 aa6.25□□□□□ -1.41
VPS13D-206ENST00000476045 ADH1AP07327 375 aa6.25□□□□□ -1.41
VPS13D-206ENST00000476045 BMP2P12643 396 aa6.25□□□□□ -1.41
VPS13D-206ENST00000476045 PROSER2Q86WR7 435 aaPredicted RBP6.25□□□□□ -1.41
VPS13D-206ENST00000476045 SLC26A8Q96RN1 970 aa6.25□□□□□ -1.41
VPS13D-206ENST00000476045 JCADQ9P266 1359 aa6.25□□□□□ -1.41
VPS13D-206ENST00000476045 KIF1AQ12756 1690 aa6.24□□□□□ -1.41
VPS13D-206ENST00000476045 IRF5Q13568 498 aa6.24□□□□□ -1.41
VPS13D-206ENST00000476045 C6orf118Q5T5N4 469 aa6.24□□□□□ -1.41
VPS13D-206ENST00000476045 ILDR2Q71H61 639 aa6.24□□□□□ -1.41
VPS13D-206ENST00000476045 TRIM52Q96A61 297 aa6.24□□□□□ -1.41
VPS13D-206ENST00000476045 TMPRSS4Q9NRS4 437 aa6.24□□□□□ -1.41
VPS13D-206ENST00000476045 CCDC144AA2RUR9 1427 aa6.24□□□□□ -1.41
VPS13D-206ENST00000476045 SOBPA7XYQ1 873 aa6.23□□□□□ -1.41
VPS13D-206ENST00000476045 ADD1P35611 737 aaKnown RBP6.23□□□□□ -1.41
VPS13D-206ENST00000476045 ZEB1P37275 1124 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-206ENST00000476045 ERVK-9P63128 1117 aa6.23□□□□□ -1.41
VPS13D-206ENST00000476045 MCM6Q14566 821 aa6.23□□□□□ -1.41
VPS13D-206ENST00000476045 COL22A1Q8NFW1 1626 aaPredicted RBP6.23□□□□□ -1.41
VPS13D-206ENST00000476045 TECPR2O15040 1411 aa6.23□□□□□ -1.41
VPS13D-206ENST00000476045 MST1RQ04912 1400 aa6.23□□□□□ -1.41
VPS13D-206ENST00000476045 ERBB4Q15303 1308 aa6.23□□□□□ -1.41
VPS13D-206ENST00000476045 SPATA31A6Q5VVP1 1343 aa6.23□□□□□ -1.41
VPS13D-206ENST00000476045 RPGRIP1LQ68CZ1 1315 aa6.23□□□□□ -1.41
VPS13D-206ENST00000476045 MYOM2P54296 1465 aa6.22□□□□□ -1.41
VPS13D-206ENST00000476045 TTLL8A6PVC2 850 aa6.22□□□□□ -1.41
VPS13D-206ENST00000476045 MAN1A2O60476 641 aa6.22□□□□□ -1.41
VPS13D-206ENST00000476045 GIGYF1O75420 1035 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-206ENST00000476045 LORP23490 312 aaPredicted RBP6.22□□□□□ -1.41
VPS13D-206ENST00000476045 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.22□□□□□ -1.41
VPS13D-206ENST00000476045 SLC16A10Q8TF71 515 aa6.22□□□□□ -1.41
VPS13D-206ENST00000476045 IRF7Q92985 503 aa6.22□□□□□ -1.41
VPS13D-206ENST00000476045 TBC1D2BQ9UPU7 963 aa6.22□□□□□ -1.41
VPS13D-206ENST00000476045 ZNF330Q9Y3S2 320 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms