RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 PDE4AP27815 886 aa12.3□□□□□ -0.44
SEMA3C-208ENST00000475955 CHRNA5P30532 468 aa12.3□□□□□ -0.44
SEMA3C-208ENST00000475955 TMPOP42166 694 aaKnown RBP12.3□□□□□ -0.44
SEMA3C-208ENST00000475955 WDR43Q15061 677 aaKnown RBP eCLIP12.3□□□□□ -0.44
SEMA3C-208ENST00000475955 TBC1D9BQ66K14 1250 aa12.3□□□□□ -0.44
SEMA3C-208ENST00000475955 BACH2Q9BYV9 841 aa12.3□□□□□ -0.44
SEMA3C-208ENST00000475955 ZNF330Q9Y3S2 320 aaPredicted RBP12.3□□□□□ -0.44
SEMA3C-208ENST00000475955 COL11A2P13942 1736 aaPredicted RBP12.3□□□□□ -0.44
SEMA3C-208ENST00000475955 MAPK8IP3Q9UPT6 1336 aa12.3□□□□□ -0.44
SEMA3C-208ENST00000475955 CACNA1SQ13698 1873 aa12.29□□□□□ -0.44
SEMA3C-208ENST00000475955 A0A087WZG4 1122 aa12.29□□□□□ -0.44
SEMA3C-208ENST00000475955 SERPINB2P05120 415 aa12.29□□□□□ -0.44
SEMA3C-208ENST00000475955 NEFMP07197 916 aa12.29□□□□□ -0.44
SEMA3C-208ENST00000475955 RIPK4P57078 832 aa12.29□□□□□ -0.44
SEMA3C-208ENST00000475955 EIF4A1P60842 406 aaKnown RBP12.29□□□□□ -0.44
SEMA3C-208ENST00000475955 BICDL1Q6ZP65 573 aa12.29□□□□□ -0.44
SEMA3C-208ENST00000475955 PNNQ9H307 717 aaKnown RBP12.29□□□□□ -0.44
SEMA3C-208ENST00000475955 ADAMTS8Q9UP79 889 aa12.29□□□□□ -0.44
SEMA3C-208ENST00000475955 RRP7AQ9Y3A4 280 aaKnown RBP12.29□□□□□ -0.44
SEMA3C-208ENST00000475955 GIGYF1O75420 1035 aaPredicted RBP12.28□□□□□ -0.44
SEMA3C-208ENST00000475955 CENPQQ7L2Z9 268 aaPredicted RBP12.28□□□□□ -0.44
SEMA3C-208ENST00000475955 BCS1LQ9Y276 419 aa12.28□□□□□ -0.44
SEMA3C-208ENST00000475955 ADCY9O60503 1353 aa12.28□□□□□ -0.44
SEMA3C-208ENST00000475955 DZIP3Q86Y13 1208 aaKnown RBP12.27□□□□□ -0.45
SEMA3C-208ENST00000475955 TRIM35Q9UPQ4 493 aa12.27□□□□□ -0.45
SEMA3C-208ENST00000475955 NEUROD2Q15784 382 aa12.26□□□□□ -0.45
SEMA3C-208ENST00000475955 CCDC24Q8N4L8 307 aa12.26□□□□□ -0.45
SEMA3C-208ENST00000475955 RUNDC1Q96C34 613 aa12.26□□□□□ -0.45
SEMA3C-208ENST00000475955 PRR5LQ6MZQ0 368 aa12.25□□□□□ -0.45
SEMA3C-208ENST00000475955 PIM2Q9P1W9 311 aa12.25□□□□□ -0.45
SEMA3C-208ENST00000475955 ATP10DQ9P241 1426 aa12.25□□□□□ -0.45
SEMA3C-208ENST00000475955 SLX4Q8IY92 1834 aa12.25□□□□□ -0.45
SEMA3C-208ENST00000475955 GOLGA2Q08379 1002 aa12.24□□□□□ -0.45
SEMA3C-208ENST00000475955 AAMPQ13685 434 aa12.24□□□□□ -0.45
SEMA3C-208ENST00000475955 HLFQ16534 295 aa12.24□□□□□ -0.45
SEMA3C-208ENST00000475955 TSPYL4Q9UJ04 414 aa12.24□□□□□ -0.45
SEMA3C-208ENST00000475955 ARFGEF2Q9Y6D5 1785 aa12.24□□□□□ -0.45
SEMA3C-208ENST00000475955 FER1L6Q2WGJ9 1857 aa12.23□□□□□ -0.45
SEMA3C-208ENST00000475955 KRT24Q2M2I5 525 aa12.23□□□□□ -0.45
SEMA3C-208ENST00000475955 DALRD3Q5D0E6 543 aaKnown RBP12.23□□□□□ -0.45
SEMA3C-208ENST00000475955 ARHGAP27Q6ZUM4 889 aa12.23□□□□□ -0.45
SEMA3C-208ENST00000475955 LRP10Q7Z4F1 713 aa12.23□□□□□ -0.45
SEMA3C-208ENST00000475955 CHL1O00533 1208 aa12.22□□□□□ -0.45
SEMA3C-208ENST00000475955 NBR1Q14596 966 aa12.22□□□□□ -0.45
SEMA3C-208ENST00000475955 PDIA6Q15084 440 aa12.22□□□□□ -0.45
SEMA3C-208ENST00000475955 TTLL7Q6ZT98 887 aa12.22□□□□□ -0.45
SEMA3C-208ENST00000475955 C2CD5Q86YS7 1000 aa12.22□□□□□ -0.45
SEMA3C-208ENST00000475955 CRBNQ96SW2 442 aa12.22□□□□□ -0.45
SEMA3C-208ENST00000475955 SETDB2Q96T68 719 aa12.22□□□□□ -0.45
SEMA3C-208ENST00000475955 TNRC6CQ9HCJ0 1690 aaKnown RBP12.22□□□□□ -0.45
SEMA3C-208ENST00000475955 ANKRD36CQ5JPF3 1778 aa12.21□□□□□ -0.45
SEMA3C-208ENST00000475955 ZNF521Q96K83 1311 aa12.21□□□□□ -0.45
SEMA3C-208ENST00000475955 MYL6BP14649 208 aa12.21□□□□□ -0.45
SEMA3C-208ENST00000475955 PRELPP51888 382 aa12.21□□□□□ -0.45
SEMA3C-208ENST00000475955 LMOD3Q0VAK6 560 aa12.21□□□□□ -0.45
SEMA3C-208ENST00000475955 PROSER3Q2NL68 480 aa12.21□□□□□ -0.45
SEMA3C-208ENST00000475955 CLEC4GQ6UXB4 293 aa12.21□□□□□ -0.45
SEMA3C-208ENST00000475955 BRIP1Q9BX63 1249 aa12.21□□□□□ -0.45
SEMA3C-208ENST00000475955 BABAM1Q9NWV8 329 aa12.21□□□□□ -0.45
SEMA3C-208ENST00000475955 DAXXQ9UER7 740 aaPredicted RBP12.21□□□□□ -0.45
SEMA3C-208ENST00000475955 DICER1Q9UPY3 1922 aaKnown RBP12.21□□□□□ -0.46
SEMA3C-208ENST00000475955 APAF1O14727 1248 aa12.2□□□□□ -0.46
SEMA3C-208ENST00000475955 ANXA1P04083 346 aa12.2□□□□□ -0.46
SEMA3C-208ENST00000475955 NPM2Q86SE8 214 aaKnown RBP12.2□□□□□ -0.46
SEMA3C-208ENST00000475955 CDCA7LQ96GN5 454 aa12.2□□□□□ -0.46
SEMA3C-208ENST00000475955 KDM2BQ8NHM5 1336 aa12.19□□□□□ -0.46
SEMA3C-208ENST00000475955 H0YIN7 160 aa12.19□□□□□ -0.46
SEMA3C-208ENST00000475955 RGL2O15211 777 aa12.19□□□□□ -0.46
SEMA3C-208ENST00000475955 EIF2S2P20042 333 aaKnown RBP12.19□□□□□ -0.46
SEMA3C-208ENST00000475955 DUSP27Q5VZP5 1158 aa12.19□□□□□ -0.46
SEMA3C-208ENST00000475955 CNBD1Q8NA66 436 aa12.19□□□□□ -0.46
SEMA3C-208ENST00000475955 ZNF526Q8TF50 670 aaPredicted RBP12.19□□□□□ -0.46
SEMA3C-208ENST00000475955 NIP7Q9Y221 180 aaKnown RBP eCLIP12.19□□□□□ -0.46
SEMA3C-208ENST00000475955 SALL2Q9Y467 1007 aaPredicted RBP12.19□□□□□ -0.46
SEMA3C-208ENST00000475955 MAP3K15Q6ZN16 1313 aa12.18□□□□□ -0.46
SEMA3C-208ENST00000475955 TIAM2Q8IVF5 1701 aa12.18□□□□□ -0.46
SEMA3C-208ENST00000475955 SENP3-EIF4A1A0A087X0R7 540 aa12.18□□□□□ -0.46
SEMA3C-208ENST00000475955 E9PSI1 815 aa12.18□□□□□ -0.46
SEMA3C-208ENST00000475955 RASSF7Q02833 373 aa12.18□□□□□ -0.46
SEMA3C-208ENST00000475955 SLFN5Q08AF3 891 aa12.18□□□□□ -0.46
SEMA3C-208ENST00000475955 NCBP3Q53F19 620 aaKnown RBP12.18□□□□□ -0.46
SEMA3C-208ENST00000475955 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
SEMA3C-208ENST00000475955 TTLL6Q8N841 843 aa12.18□□□□□ -0.46
SEMA3C-208ENST00000475955 NECTIN2Q92692 538 aa12.18□□□□□ -0.46
SEMA3C-208ENST00000475955 ZNF652Q9Y2D9 606 aa12.18□□□□□ -0.46
SEMA3C-208ENST00000475955 LAS1LQ9Y4W2 734 aaKnown RBP12.18□□□□□ -0.46
SEMA3C-208ENST00000475955 LAMB2P55268 1798 aa12.18□□□□□ -0.46
SEMA3C-208ENST00000475955 ERBB4Q15303 1308 aa12.17□□□□□ -0.46
SEMA3C-208ENST00000475955 UBN2Q6ZU65 1347 aa12.17□□□□□ -0.46
SEMA3C-208ENST00000475955 FAM177BA6PVY3 158 aa12.17□□□□□ -0.46
SEMA3C-208ENST00000475955 ERVV-1B6SEH8 477 aa12.17□□□□□ -0.46
SEMA3C-208ENST00000475955 ZNF853P0CG23 659 aa12.17□□□□□ -0.46
SEMA3C-208ENST00000475955 SRGNP10124 158 aa12.17□□□□□ -0.46
SEMA3C-208ENST00000475955 PDE6BP35913 854 aa12.17□□□□□ -0.46
SEMA3C-208ENST00000475955 C1QTNF8P60827 252 aa12.17□□□□□ -0.46
SEMA3C-208ENST00000475955 FAM161AQ3B820 660 aa12.17□□□□□ -0.46
SEMA3C-208ENST00000475955 C9orf131Q5VYM1 1079 aa12.17□□□□□ -0.46
SEMA3C-208ENST00000475955 NBPF5PQ86XG9 351 aaPredicted RBP12.17□□□□□ -0.46
SEMA3C-208ENST00000475955 ZNF622Q969S3 477 aaKnown RBP eCLIP12.17□□□□□ -0.46
SEMA3C-208ENST00000475955 ZBTB3Q9H5J0 574 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms