RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 TMOD3Q9NYL9 352 aa9.06□□□□□ -0.96
SHQ1-207ENST00000475558 SOS1Q07889 1333 aaPredicted RBP9.05□□□□□ -0.96
SHQ1-207ENST00000475558 TOGARAM1Q9Y4F4 1720 aa9.05□□□□□ -0.96
SHQ1-207ENST00000475558 MS4A1P11836 297 aa9.05□□□□□ -0.96
SHQ1-207ENST00000475558 C1orf141Q5JVX7 400 aa9.05□□□□□ -0.96
SHQ1-207ENST00000475558 DCAF8Q5TAQ9 597 aa9.05□□□□□ -0.96
SHQ1-207ENST00000475558 DUSP27Q5VZP5 1158 aa9.05□□□□□ -0.96
SHQ1-207ENST00000475558 ARHGAP27Q6ZUM4 889 aa9.05□□□□□ -0.96
SHQ1-207ENST00000475558 RCAN3Q9UKA8 241 aa9.05□□□□□ -0.96
SHQ1-207ENST00000475558 ASAP1Q9ULH1 1129 aa9.05□□□□□ -0.96
SHQ1-207ENST00000475558 BCS1LQ9Y276 419 aa9.05□□□□□ -0.96
SHQ1-207ENST00000475558 MAP2P11137 1827 aaKnown RBP9.05□□□□□ -0.96
SHQ1-207ENST00000475558 CICQ96RK0 1608 aaPredicted RBP9.05□□□□□ -0.96
SHQ1-207ENST00000475558 A0A0G2JLW4 131 aa9.04□□□□□ -0.96
SHQ1-207ENST00000475558 ITPK1Q13572 414 aa9.04□□□□□ -0.96
SHQ1-207ENST00000475558 MTHFSDQ2M296 383 aaKnown RBP9.04□□□□□ -0.96
SHQ1-207ENST00000475558 TRAPPC3LQ5T215 181 aa9.04□□□□□ -0.96
SHQ1-207ENST00000475558 CDAN1Q8IWY9 1227 aa9.04□□□□□ -0.96
SHQ1-207ENST00000475558 IFNL2Q8IZJ0 200 aa9.04□□□□□ -0.96
SHQ1-207ENST00000475558 CCDC87Q9NVE4 849 aa9.04□□□□□ -0.96
SHQ1-207ENST00000475558 RRP7AQ9Y3A4 280 aaKnown RBP9.04□□□□□ -0.96
SHQ1-207ENST00000475558 RTCBQ9Y3I0 505 aaKnown RBP9.04□□□□□ -0.96
SHQ1-207ENST00000475558 PKD1L3Q7Z443 1732 aa9.04□□□□□ -0.96
SHQ1-207ENST00000475558 KIF13BQ9NQT8 1826 aa9.03□□□□□ -0.96
SHQ1-207ENST00000475558 PXDNLA1KZ92 1463 aa9.03□□□□□ -0.96
SHQ1-207ENST00000475558 TAF7Q15545 349 aaPredicted RBP9.03□□□□□ -0.96
SHQ1-207ENST00000475558 RC3H1Q5TC82 1133 aaKnown RBP9.03□□□□□ -0.96
SHQ1-207ENST00000475558 AEBP1Q8IUX7 1158 aa9.03□□□□□ -0.96
SHQ1-207ENST00000475558 C16orf71Q8IYS4 520 aaPredicted RBP9.03□□□□□ -0.96
SHQ1-207ENST00000475558 RBM46Q8TBY0 533 aaKnown RBP9.03□□□□□ -0.96
SHQ1-207ENST00000475558 CDCA7LQ96GN5 454 aa9.03□□□□□ -0.96
SHQ1-207ENST00000475558 ATG3Q9NT62 314 aa9.03□□□□□ -0.96
SHQ1-207ENST00000475558 NCAPD2Q15021 1401 aa9.03□□□□□ -0.96
SHQ1-207ENST00000475558 CHL1O00533 1208 aa9.02□□□□□ -0.97
SHQ1-207ENST00000475558 ZNF853P0CG23 659 aa9.02□□□□□ -0.97
SHQ1-207ENST00000475558 PHKG2P15735 406 aa9.02□□□□□ -0.97
SHQ1-207ENST00000475558 FSTL1Q12841 308 aa9.02□□□□□ -0.97
SHQ1-207ENST00000475558 NMRK2Q9NPI5 230 aa9.02□□□□□ -0.97
SHQ1-207ENST00000475558 RTN4Q9NQC3 1192 aaKnown RBP9.02□□□□□ -0.97
SHQ1-207ENST00000475558 PARP3Q9Y6F1 533 aa9.02□□□□□ -0.97
SHQ1-207ENST00000475558 ERVV-2B6SEH9 535 aa9.01□□□□□ -0.97
SHQ1-207ENST00000475558 IPO8O15397 1037 aaKnown RBP9.01□□□□□ -0.97
SHQ1-207ENST00000475558 RPS6KA4O75676 772 aa9.01□□□□□ -0.97
SHQ1-207ENST00000475558 PYGBP11216 843 aa9.01□□□□□ -0.97
SHQ1-207ENST00000475558 DPEP1P16444 411 aa9.01□□□□□ -0.97
SHQ1-207ENST00000475558 RFC4P35249 363 aa9.01□□□□□ -0.97
SHQ1-207ENST00000475558 AAMPQ13685 434 aa9.01□□□□□ -0.97
SHQ1-207ENST00000475558 ALDH1L2Q3SY69 923 aa9.01□□□□□ -0.97
SHQ1-207ENST00000475558 ARHGEF1Q92888 912 aaKnown RBP9.01□□□□□ -0.97
SHQ1-207ENST00000475558 DCAF5Q96JK2 942 aa9.01□□□□□ -0.97
SHQ1-207ENST00000475558 CHMP4BQ9H444 224 aaKnown RBP9.01□□□□□ -0.97
SHQ1-207ENST00000475558 PIM2Q9P1W9 311 aa9.01□□□□□ -0.97
SHQ1-207ENST00000475558 SUPT16HQ9Y5B9 1047 aaKnown RBP9.01□□□□□ -0.97
SHQ1-207ENST00000475558 N4BP2Q86UW6 1770 aaPredicted RBP9.01□□□□□ -0.97
SHQ1-207ENST00000475558 KDM2BQ8NHM5 1336 aa9.01□□□□□ -0.97
SHQ1-207ENST00000475558 C10orf71Q711Q0 1435 aa9□□□□□ -0.97
SHQ1-207ENST00000475558 GYS1P13807 737 aa9□□□□□ -0.97
SHQ1-207ENST00000475558 BRPF1P55201 1214 aaPredicted RBP9□□□□□ -0.97
SHQ1-207ENST00000475558 C9orf131Q5VYM1 1079 aa9□□□□□ -0.97
SHQ1-207ENST00000475558 ZNF530Q6P9A1 599 aaPredicted RBP9□□□□□ -0.97
SHQ1-207ENST00000475558 JMYQ8N9B5 988 aa9□□□□□ -0.97
SHQ1-207ENST00000475558 KLRG1Q96E93 195 aa9□□□□□ -0.97
SHQ1-207ENST00000475558 RNF123Q5XPI4 1314 aa9□□□□□ -0.97
SHQ1-207ENST00000475558 CNTNAP4Q9C0A0 1308 aa9□□□□□ -0.97
SHQ1-207ENST00000475558 KIAA1551Q9HCM1 1747 aa9□□□□□ -0.97
SHQ1-207ENST00000475558 ST18O60284 1047 aa8.99□□□□□ -0.97
SHQ1-207ENST00000475558 KCNA3P22001 575 aa8.99□□□□□ -0.97
SHQ1-207ENST00000475558 IRX5P78411 483 aaPredicted RBP8.99□□□□□ -0.97
SHQ1-207ENST00000475558 TEFQ10587 303 aa8.99□□□□□ -0.97
SHQ1-207ENST00000475558 DALRD3Q5D0E6 543 aaKnown RBP8.99□□□□□ -0.97
SHQ1-207ENST00000475558 ZNF831Q5JPB2 1677 aa8.98□□□□□ -0.97
SHQ1-207ENST00000475558 C4AP0C0L4 1744 aa8.98□□□□□ -0.97
SHQ1-207ENST00000475558 WDR90Q96KV7 1748 aa8.98□□□□□ -0.97
SHQ1-207ENST00000475558 RNMTO43148 476 aaKnown RBP8.98□□□□□ -0.97
SHQ1-207ENST00000475558 HOXB7P09629 217 aa8.98□□□□□ -0.97
SHQ1-207ENST00000475558 PDE3AQ14432 1141 aa8.98□□□□□ -0.97
SHQ1-207ENST00000475558 ARHGAP45Q92619 1136 aa8.98□□□□□ -0.97
SHQ1-207ENST00000475558 SLC4A9Q96Q91 983 aa8.98□□□□□ -0.97
SHQ1-207ENST00000475558 OCEL1Q9H607 264 aa8.98□□□□□ -0.97
SHQ1-207ENST00000475558 FBXO3Q9UK99 471 aa8.98□□□□□ -0.97
SHQ1-207ENST00000475558 LAS1LQ9Y4W2 734 aaKnown RBP8.98□□□□□ -0.97
SHQ1-207ENST00000475558 ARFGEF1Q9Y6D6 1849 aa8.98□□□□□ -0.97
SHQ1-207ENST00000475558 BRCA1P38398 1863 aaKnown RBP8.98□□□□□ -0.97
SHQ1-207ENST00000475558 CABP4P57796 275 aa8.97□□□□□ -0.97
SHQ1-207ENST00000475558 EXOSC9Q06265 439 aaKnown RBP8.97□□□□□ -0.97
SHQ1-207ENST00000475558 COL13A1Q5TAT6 717 aaPredicted RBP8.97□□□□□ -0.97
SHQ1-207ENST00000475558 IL17REQ8NFR9 667 aa8.97□□□□□ -0.97
SHQ1-207ENST00000475558 RRAGCQ9HB90 399 aa8.97□□□□□ -0.97
SHQ1-207ENST00000475558 RNF181Q9P0P0 153 aa8.97□□□□□ -0.97
SHQ1-207ENST00000475558 TSPYL4Q9UJ04 414 aa8.97□□□□□ -0.97
SHQ1-207ENST00000475558 FANCIQ9NVI1 1328 aa8.97□□□□□ -0.97
SHQ1-207ENST00000475558 BTBD11A6QL63 1104 aa8.96□□□□□ -0.98
SHQ1-207ENST00000475558 VAMP4O75379 141 aa8.96□□□□□ -0.98
SHQ1-207ENST00000475558 RARSP54136 660 aaKnown RBP8.96□□□□□ -0.98
SHQ1-207ENST00000475558 HTRA3P83110 453 aa8.96□□□□□ -0.98
SHQ1-207ENST00000475558 MCM10Q7L590 875 aa8.96□□□□□ -0.98
SHQ1-207ENST00000475558 SMC1BQ8NDV3 1235 aa8.96□□□□□ -0.98
SHQ1-207ENST00000475558 MBIPQ9NS73 344 aa8.96□□□□□ -0.98
SHQ1-207ENST00000475558 PCDHB8Q9UN66 801 aa8.96□□□□□ -0.98
SHQ1-207ENST00000475558 GTF3C3Q9Y5Q9 886 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms