RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 BCORQ6W2J9 1755 aa17.25■□□□□ 0.35
RTN1-205ENST00000474911 N4BP2Q86UW6 1770 aaPredicted RBP17.25■□□□□ 0.35
RTN1-205ENST00000474911 GOLGB1Q14789 3259 aaKnown RBP17.25■□□□□ 0.35
RTN1-205ENST00000474911 BRCA1P38398 1863 aaKnown RBP17.24■□□□□ 0.35
RTN1-205ENST00000474911 PRAMEF22A3QJZ6 481 aa17.24■□□□□ 0.35
RTN1-205ENST00000474911 YY1P25490 414 aa17.24■□□□□ 0.35
RTN1-205ENST00000474911 DDR1Q08345 913 aa17.24■□□□□ 0.35
RTN1-205ENST00000474911 ALDH1L2Q3SY69 923 aa17.24■□□□□ 0.35
RTN1-205ENST00000474911 GTF3C3Q9Y5Q9 886 aa17.24■□□□□ 0.35
RTN1-205ENST00000474911 PXDNLA1KZ92 1463 aa17.24■□□□□ 0.35
RTN1-205ENST00000474911 POLRMTO00411 1230 aaKnown RBP17.23■□□□□ 0.35
RTN1-205ENST00000474911 ELL2O00472 640 aaPredicted RBP17.23■□□□□ 0.35
RTN1-205ENST00000474911 GRIN3BO60391 1043 aa17.23■□□□□ 0.35
RTN1-205ENST00000474911 BCAR3O75815 825 aa17.23■□□□□ 0.35
RTN1-205ENST00000474911 YBX3P16989 372 aaKnown RBP eCLIP17.23■□□□□ 0.35
RTN1-205ENST00000474911 EIF4A1P60842 406 aaKnown RBP17.23■□□□□ 0.35
RTN1-205ENST00000474911 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
RTN1-205ENST00000474911 PELP1Q8IZL8 1130 aaKnown RBP17.23■□□□□ 0.35
RTN1-205ENST00000474911 GIGYF1O75420 1035 aaPredicted RBP17.22■□□□□ 0.35
RTN1-205ENST00000474911 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
RTN1-205ENST00000474911 NFIXQ14938 502 aa17.21■□□□□ 0.35
RTN1-205ENST00000474911 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
RTN1-205ENST00000474911 CACNA1FO60840 1977 aa17.21■□□□□ 0.35
RTN1-205ENST00000474911 SSH1Q8WYL5 1049 aa17.21■□□□□ 0.34
RTN1-205ENST00000474911 ZNF330Q9Y3S2 320 aaPredicted RBP17.21■□□□□ 0.34
RTN1-205ENST00000474911 RGL2O15211 777 aa17.2■□□□□ 0.34
RTN1-205ENST00000474911 HOXB7P09629 217 aa17.2■□□□□ 0.34
RTN1-205ENST00000474911 BRPF1P55201 1214 aaPredicted RBP17.2■□□□□ 0.34
RTN1-205ENST00000474911 BCL2L13Q9BXK5 485 aa17.2■□□□□ 0.34
RTN1-205ENST00000474911 TBC1D2BQ9UPU7 963 aa17.2■□□□□ 0.34
RTN1-205ENST00000474911 NBPF26B4DH59 902 aa17.19■□□□□ 0.34
RTN1-205ENST00000474911 CAMTA2O94983 1202 aa17.19■□□□□ 0.34
RTN1-205ENST00000474911 NBPF10Q6P3W6 841 aaKnown RBP17.19■□□□□ 0.34
RTN1-205ENST00000474911 DZIP3Q86Y13 1208 aaKnown RBP17.19■□□□□ 0.34
RTN1-205ENST00000474911 NBPF15Q8N660 670 aa17.19■□□□□ 0.34
RTN1-205ENST00000474911 CHMP4AQ9BY43 222 aa17.19■□□□□ 0.34
RTN1-205ENST00000474911 KIF16BQ96L93 1317 aa17.19■□□□□ 0.34
RTN1-205ENST00000474911 PLIN1O60240 522 aa17.18■□□□□ 0.34
RTN1-205ENST00000474911 PIP4K2AP48426 406 aaPredicted RBP17.18■□□□□ 0.34
RTN1-205ENST00000474911 ARFGEF1Q9Y6D6 1849 aa17.18■□□□□ 0.34
RTN1-205ENST00000474911 SERPINB2P05120 415 aa17.17■□□□□ 0.34
RTN1-205ENST00000474911 IRX6P78412 446 aaPredicted RBP17.17■□□□□ 0.34
RTN1-205ENST00000474911 TBC1D9BQ66K14 1250 aa17.17■□□□□ 0.34
RTN1-205ENST00000474911 CLEC4GQ6UXB4 293 aa17.17■□□□□ 0.34
RTN1-205ENST00000474911 DLEC1Q9Y238 1755 aa17.17■□□□□ 0.34
RTN1-205ENST00000474911 A0A0G2JLW4 131 aa17.16■□□□□ 0.34
RTN1-205ENST00000474911 DPEP1P16444 411 aa17.16■□□□□ 0.34
RTN1-205ENST00000474911 CCDC30Q5VVM6 783 aa17.16■□□□□ 0.34
RTN1-205ENST00000474911 ERICH6BQ5W0A0 696 aa17.16■□□□□ 0.34
RTN1-205ENST00000474911 MRPL50Q8N5N7 158 aaKnown RBP17.16■□□□□ 0.34
RTN1-205ENST00000474911 FRAT1Q92837 279 aaPredicted RBP17.16■□□□□ 0.34
RTN1-205ENST00000474911 ERBB4Q15303 1308 aa17.16■□□□□ 0.34
RTN1-205ENST00000474911 CARMIL3Q8ND23 1372 aa17.16■□□□□ 0.34
RTN1-205ENST00000474911 KCNA3P22001 575 aa17.15■□□□□ 0.34
RTN1-205ENST00000474911 ZNF652Q9Y2D9 606 aa17.15■□□□□ 0.34
RTN1-205ENST00000474911 IPO8O15397 1037 aaKnown RBP17.14■□□□□ 0.33
RTN1-205ENST00000474911 ZKSCAN2Q63HK3 967 aa17.14■□□□□ 0.33
RTN1-205ENST00000474911 BICDL1Q6ZP65 573 aa17.14■□□□□ 0.33
RTN1-205ENST00000474911 STK31Q9BXU1 1019 aa17.14■□□□□ 0.33
RTN1-205ENST00000474911 NUP98P52948 1817 aa17.14■□□□□ 0.33
RTN1-205ENST00000474911 ANKRD31Q8N7Z5 1873 aa17.14■□□□□ 0.33
RTN1-205ENST00000474911 MS4A1P11836 297 aa17.13■□□□□ 0.33
RTN1-205ENST00000474911 PDE3AQ14432 1141 aa17.13■□□□□ 0.33
RTN1-205ENST00000474911 HDGFL1Q5TGJ6 251 aa17.13■□□□□ 0.33
RTN1-205ENST00000474911 SETDB2Q96T68 719 aa17.13■□□□□ 0.33
RTN1-205ENST00000474911 PIM2Q9P1W9 311 aa17.13■□□□□ 0.33
RTN1-205ENST00000474911 TCERG1O14776 1098 aaKnown RBP17.13■□□□□ 0.33
RTN1-205ENST00000474911 WWC3Q9ULE0 1092 aa17.13■□□□□ 0.33
RTN1-205ENST00000474911 NOB1Q9ULX3 412 aaKnown RBP17.13■□□□□ 0.33
RTN1-205ENST00000474911 ATF7IPQ6VMQ6 1270 aa17.12■□□□□ 0.33
RTN1-205ENST00000474911 ARHGAP45Q92619 1136 aa17.12■□□□□ 0.33
RTN1-205ENST00000474911 BCS1LQ9Y276 419 aa17.12■□□□□ 0.33
RTN1-205ENST00000474911 ERVV-1B6SEH8 477 aa17.11■□□□□ 0.33
RTN1-205ENST00000474911 C20orf194Q5TEA3 1177 aa17.11■□□□□ 0.33
RTN1-205ENST00000474911 PRR5LQ6MZQ0 368 aa17.11■□□□□ 0.33
RTN1-205ENST00000474911 PDZRN3Q9UPQ7 1066 aa17.11■□□□□ 0.33
RTN1-205ENST00000474911 SLC4A2P04920 1241 aa17.1■□□□□ 0.33
RTN1-205ENST00000474911 EIF2S2P20042 333 aaKnown RBP17.1■□□□□ 0.33
RTN1-205ENST00000474911 CHRNA5P30532 468 aa17.1■□□□□ 0.33
RTN1-205ENST00000474911 ZNF784Q8NCA9 323 aaPredicted RBP17.1■□□□□ 0.33
RTN1-205ENST00000474911 PTPRCP08575 1304 aa17.09■□□□□ 0.33
RTN1-205ENST00000474911 MAP3K15Q6ZN16 1313 aa17.09■□□□□ 0.33
RTN1-205ENST00000474911 TRIM27P14373 513 aa17.09■□□□□ 0.33
RTN1-205ENST00000474911 MYL6BP14649 208 aa17.09■□□□□ 0.33
RTN1-205ENST00000474911 PDIA6Q15084 440 aa17.09■□□□□ 0.33
RTN1-205ENST00000474911 DALRD3Q5D0E6 543 aaKnown RBP17.09■□□□□ 0.33
RTN1-205ENST00000474911 LRP10Q7Z4F1 713 aa17.09■□□□□ 0.33
RTN1-205ENST00000474911 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
RTN1-205ENST00000474911 DZIP1LQ8IYY4 767 aaKnown RBP17.09■□□□□ 0.33
RTN1-205ENST00000474911 NECTIN2Q92692 538 aa17.09■□□□□ 0.33
RTN1-205ENST00000474911 BRIP1Q9BX63 1249 aa17.09■□□□□ 0.33
RTN1-205ENST00000474911 PDE6BP35913 854 aa17.08■□□□□ 0.32
RTN1-205ENST00000474911 KIF6Q6ZMV9 814 aa17.08■□□□□ 0.32
RTN1-205ENST00000474911 CNBD1Q8NA66 436 aa17.08■□□□□ 0.32
RTN1-205ENST00000474911 API5Q9BZZ5 524 aaKnown RBP17.08■□□□□ 0.32
RTN1-205ENST00000474911 DBF4Q9UBU7 674 aaPredicted RBP17.08■□□□□ 0.32
RTN1-205ENST00000474911 ATP10DQ9P241 1426 aa17.08■□□□□ 0.32
RTN1-205ENST00000474911 COL11A2P13942 1736 aaPredicted RBP17.08■□□□□ 0.32
RTN1-205ENST00000474911 H0YIN7 160 aa17.07■□□□□ 0.32
RTN1-205ENST00000474911 HLFQ16534 295 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms