RNA–Protein interactions for RNA: ENST00000474734.5

CACFD1-204, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 689 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-204ENST00000474734 KRT24Q2M2I5 525 aa23.81■■□□□ 1.4
CACFD1-204ENST00000474734 DALRD3Q5D0E6 543 aaKnown RBP23.81■■□□□ 1.4
CACFD1-204ENST00000474734 ZNF428Q96B54 188 aa23.81■■□□□ 1.4
CACFD1-204ENST00000474734 STARD3NLO95772 234 aa23.8■■□□□ 1.4
CACFD1-204ENST00000474734 C9orf131Q5VYM1 1079 aa23.8■■□□□ 1.4
CACFD1-204ENST00000474734 USPL1Q5W0Q7 1092 aa23.8■■□□□ 1.4
CACFD1-204ENST00000474734 POLRMTO00411 1230 aaKnown RBP23.79■■□□□ 1.4
CACFD1-204ENST00000474734 TOMM70O94826 608 aa23.79■■□□□ 1.4
CACFD1-204ENST00000474734 TM4SF1P30408 202 aa23.79■■□□□ 1.4
CACFD1-204ENST00000474734 CHRNA5P30532 468 aa23.79■■□□□ 1.4
CACFD1-204ENST00000474734 TSPYL6Q8N831 410 aa23.79■■□□□ 1.4
CACFD1-204ENST00000474734 NMRK2Q9NPI5 230 aa23.79■■□□□ 1.4
CACFD1-204ENST00000474734 ELL2O00472 640 aaPredicted RBP23.78■■□□□ 1.4
CACFD1-204ENST00000474734 BCL2L12Q9HB09 334 aa23.78■■□□□ 1.4
CACFD1-204ENST00000474734 ARFGEF1Q9Y6D6 1849 aa23.77■■□□□ 1.4
CACFD1-204ENST00000474734 VAMP4O75379 141 aa23.77■■□□□ 1.4
CACFD1-204ENST00000474734 HDGFL1Q5TGJ6 251 aa23.77■■□□□ 1.4
CACFD1-204ENST00000474734 ERBB4Q15303 1308 aa23.77■■□□□ 1.4
CACFD1-204ENST00000474734 COL15A1P39059 1388 aa23.77■■□□□ 1.4
CACFD1-204ENST00000474734 PRAMEF22A3QJZ6 481 aa23.76■■□□□ 1.39
CACFD1-204ENST00000474734 IFFO2Q5TF58 517 aa23.76■■□□□ 1.39
CACFD1-204ENST00000474734 CCDC30Q5VVM6 783 aa23.76■■□□□ 1.39
CACFD1-204ENST00000474734 USP16Q9Y5T5 823 aa23.76■■□□□ 1.39
CACFD1-204ENST00000474734 EIF2S2P20042 333 aaKnown RBP23.75■■□□□ 1.39
CACFD1-204ENST00000474734 NARFQ9UHQ1 456 aa23.75■■□□□ 1.39
CACFD1-204ENST00000474734 CANXP27824 592 aaKnown RBP23.74■■□□□ 1.39
CACFD1-204ENST00000474734 APLP1P51693 650 aa23.74■■□□□ 1.39
CACFD1-204ENST00000474734 RNF181Q9P0P0 153 aa23.74■■□□□ 1.39
CACFD1-204ENST00000474734 NFIXQ14938 502 aa23.73■■□□□ 1.39
CACFD1-204ENST00000474734 STK31Q9BXU1 1019 aa23.73■■□□□ 1.39
CACFD1-204ENST00000474734 ALDH1L2Q3SY69 923 aa23.72■■□□□ 1.39
CACFD1-204ENST00000474734 C16orf71Q8IYS4 520 aaPredicted RBP23.72■■□□□ 1.39
CACFD1-204ENST00000474734 EIF5P55010 431 aaKnown RBP23.71■■□□□ 1.39
CACFD1-204ENST00000474734 DBF4Q9UBU7 674 aaPredicted RBP23.71■■□□□ 1.39
CACFD1-204ENST00000474734 KDM2BQ8NHM5 1336 aa23.7■■□□□ 1.38
CACFD1-204ENST00000474734 SERPINB2P05120 415 aa23.69■■□□□ 1.38
CACFD1-204ENST00000474734 NECTIN2Q92692 538 aa23.69■■□□□ 1.38
CACFD1-204ENST00000474734 DDX21Q9NR30 783 aaKnown RBP eCLIP23.69■■□□□ 1.38
CACFD1-204ENST00000474734 CACNA1FO60840 1977 aa23.69■■□□□ 1.38
CACFD1-204ENST00000474734 RBM46Q8TBY0 533 aaKnown RBP23.68■■□□□ 1.38
CACFD1-204ENST00000474734 CHPF2Q9P2E5 772 aa23.68■■□□□ 1.38
CACFD1-204ENST00000474734 A1BGP04217 495 aa23.67■■□□□ 1.38
CACFD1-204ENST00000474734 CENPBP07199 599 aaPredicted RBP23.67■■□□□ 1.38
CACFD1-204ENST00000474734 RARSP54136 660 aaKnown RBP23.67■■□□□ 1.38
CACFD1-204ENST00000474734 HYPKQ9NX55 129 aa23.67■■□□□ 1.38
CACFD1-204ENST00000474734 AFDNP55196 1824 aaKnown RBP23.67■■□□□ 1.38
CACFD1-204ENST00000474734 IL6STP40189 918 aaPredicted RBP23.66■■□□□ 1.38
CACFD1-204ENST00000474734 BICDL1Q6ZP65 573 aa23.66■■□□□ 1.38
CACFD1-204ENST00000474734 NPM2Q86SE8 214 aaKnown RBP23.66■■□□□ 1.38
CACFD1-204ENST00000474734 RCAN3Q9UKA8 241 aa23.66■■□□□ 1.38
CACFD1-204ENST00000474734 SSH1Q8WYL5 1049 aa23.65■■□□□ 1.38
CACFD1-204ENST00000474734 RRAGCQ9HB90 399 aa23.65■■□□□ 1.38
CACFD1-204ENST00000474734 SMC4Q9NTJ3 1288 aa23.65■■□□□ 1.38
CACFD1-204ENST00000474734 CARMIL3Q8ND23 1372 aa23.65■■□□□ 1.38
CACFD1-204ENST00000474734 A0A087WZG4 1122 aa23.64■■□□□ 1.37
CACFD1-204ENST00000474734 SLC4A2P04920 1241 aa23.64■■□□□ 1.37
CACFD1-204ENST00000474734 RASSF7Q02833 373 aa23.64■■□□□ 1.37
CACFD1-204ENST00000474734 PDIA6Q15084 440 aa23.64■■□□□ 1.37
CACFD1-204ENST00000474734 C2CD5Q86YS7 1000 aa23.64■■□□□ 1.37
CACFD1-204ENST00000474734 TTLL6Q8N841 843 aa23.64■■□□□ 1.37
CACFD1-204ENST00000474734 TBC1D2BQ9UPU7 963 aa23.64■■□□□ 1.37
CACFD1-204ENST00000474734 SBF1O95248 1867 aa23.64■■□□□ 1.37
CACFD1-204ENST00000474734 NBPF26B4DH59 902 aa23.63■■□□□ 1.37
CACFD1-204ENST00000474734 H0YIN7 160 aa23.63■■□□□ 1.37
CACFD1-204ENST00000474734 PIP4K2AP48426 406 aaPredicted RBP23.63■■□□□ 1.37
CACFD1-204ENST00000474734 BRPF1P55201 1214 aaPredicted RBP23.63■■□□□ 1.37
CACFD1-204ENST00000474734 TBC1D9BQ66K14 1250 aa23.63■■□□□ 1.37
CACFD1-204ENST00000474734 NBPF10Q6P3W6 841 aaKnown RBP23.63■■□□□ 1.37
CACFD1-204ENST00000474734 NBPF15Q8N660 670 aa23.63■■□□□ 1.37
CACFD1-204ENST00000474734 DNAJC5GQ8N7S2 189 aa23.63■■□□□ 1.37
CACFD1-204ENST00000474734 NRXN2Q9P2S2 1712 aa23.63■■□□□ 1.37
CACFD1-204ENST00000474734 ZNF330Q9Y3S2 320 aaPredicted RBP23.63■■□□□ 1.37
CACFD1-204ENST00000474734 MYL6BP14649 208 aa23.62■■□□□ 1.37
CACFD1-204ENST00000474734 MRPL50Q8N5N7 158 aaKnown RBP23.62■■□□□ 1.37
CACFD1-204ENST00000474734 KIF16BQ96L93 1317 aa23.61■■□□□ 1.37
CACFD1-204ENST00000474734 TCERG1O14776 1098 aaKnown RBP23.61■■□□□ 1.37
CACFD1-204ENST00000474734 FSTL1Q12841 308 aa23.61■■□□□ 1.37
CACFD1-204ENST00000474734 PROSER3Q2NL68 480 aa23.61■■□□□ 1.37
CACFD1-204ENST00000474734 LMNB1P20700 586 aa23.6■■□□□ 1.37
CACFD1-204ENST00000474734 BCL2L13Q9BXK5 485 aa23.6■■□□□ 1.37
CACFD1-204ENST00000474734 CAMTA2O94983 1202 aa23.59■■□□□ 1.37
CACFD1-204ENST00000474734 ANXA1P04083 346 aa23.59■■□□□ 1.37
CACFD1-204ENST00000474734 LRP10Q7Z4F1 713 aa23.59■■□□□ 1.37
CACFD1-204ENST00000474734 ZC3H4Q9UPT8 1303 aaKnown RBP23.59■■□□□ 1.37
CACFD1-204ENST00000474734 CCDC24Q8N4L8 307 aa23.58■■□□□ 1.37
CACFD1-204ENST00000474734 PTPRCP08575 1304 aa23.58■■□□□ 1.36
CACFD1-204ENST00000474734 DLEC1Q9Y238 1755 aa23.57■■□□□ 1.36
CACFD1-204ENST00000474734 DDX58O95786 925 aaKnown RBP23.57■■□□□ 1.36
CACFD1-204ENST00000474734 HTRA3P83110 453 aa23.57■■□□□ 1.36
CACFD1-204ENST00000474734 FLIIQ13045 1269 aa23.57■■□□□ 1.36
CACFD1-204ENST00000474734 TNRC6CQ9HCJ0 1690 aaKnown RBP23.57■■□□□ 1.36
CACFD1-204ENST00000474734 WDR90Q96KV7 1748 aa23.56■■□□□ 1.36
CACFD1-204ENST00000474734 IPO8O15397 1037 aaKnown RBP23.56■■□□□ 1.36
CACFD1-204ENST00000474734 BCAR3O75815 825 aa23.56■■□□□ 1.36
CACFD1-204ENST00000474734 KIF6Q6ZMV9 814 aa23.56■■□□□ 1.36
CACFD1-204ENST00000474734 COPS6Q7L5N1 327 aa23.56■■□□□ 1.36
CACFD1-204ENST00000474734 XAGE3Q8WTP9 111 aa23.56■■□□□ 1.36
CACFD1-204ENST00000474734 ZNF622Q969S3 477 aaKnown RBP eCLIP23.56■■□□□ 1.36
CACFD1-204ENST00000474734 PDE6BP35913 854 aa23.55■■□□□ 1.36
CACFD1-204ENST00000474734 PRELPP51888 382 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms