RNA–Protein interactions for RNA: ENST00000474393.5

TMCO3-207, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2 BASIC

Gene TMCO3, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-207ENST00000474393 COL18A1P39060 1754 aa18.18■□□□□ 0.5
TMCO3-207ENST00000474393 KIAA2012Q0VF49 1180 aa18.18■□□□□ 0.5
TMCO3-207ENST00000474393 TTC22Q5TAA0 569 aa18.18■□□□□ 0.5
TMCO3-207ENST00000474393 ST18O60284 1047 aa18.18■□□□□ 0.5
TMCO3-207ENST00000474393 CCDC94Q9BW85 323 aaPredicted RBP18.18■□□□□ 0.5
TMCO3-207ENST00000474393 PHAXQ9H814 394 aaKnown RBP18.18■□□□□ 0.5
TMCO3-207ENST00000474393 ZSCAN20P17040 1043 aaPredicted RBP18.17■□□□□ 0.5
TMCO3-207ENST00000474393 TATP17735 454 aaPredicted RBP18.17■□□□□ 0.5
TMCO3-207ENST00000474393 ATP2B3Q16720 1220 aa18.17■□□□□ 0.5
TMCO3-207ENST00000474393 CHMP4AQ9BY43 222 aa18.17■□□□□ 0.5
TMCO3-207ENST00000474393 PPP4R3BQ5MIZ7 849 aa18.16■□□□□ 0.5
TMCO3-207ENST00000474393 SLAIN2Q9P270 581 aa18.16■□□□□ 0.5
TMCO3-207ENST00000474393 HMMRO75330 724 aa18.16■□□□□ 0.5
TMCO3-207ENST00000474393 GNAI2P04899 355 aa18.16■□□□□ 0.5
TMCO3-207ENST00000474393 CHPF2Q9P2E5 772 aa18.16■□□□□ 0.5
TMCO3-207ENST00000474393 CRYBG1Q9Y4K1 1723 aa18.15■□□□□ 0.5
TMCO3-207ENST00000474393 TSPY26PQ9H489 355 aa18.15■□□□□ 0.5
TMCO3-207ENST00000474393 GNAI3P08754 354 aa18.14■□□□□ 0.5
TMCO3-207ENST00000474393 LARP6Q9BRS8 491 aaKnown RBP18.14■□□□□ 0.5
TMCO3-207ENST00000474393 SPG7Q9UQ90 795 aa18.14■□□□□ 0.5
TMCO3-207ENST00000474393 TMX3Q96JJ7 454 aa18.14■□□□□ 0.49
TMCO3-207ENST00000474393 CPDO75976 1380 aa18.14■□□□□ 0.49
TMCO3-207ENST00000474393 MEGF6O75095 1541 aa18.13■□□□□ 0.49
TMCO3-207ENST00000474393 PXDNLA1KZ92 1463 aa18.13■□□□□ 0.49
TMCO3-207ENST00000474393 ABCC6O95255 1503 aa18.13■□□□□ 0.49
TMCO3-207ENST00000474393 UPF3BQ9BZI7 483 aaKnown RBP18.13■□□□□ 0.49
TMCO3-207ENST00000474393 MYRIPQ8NFW9 859 aa18.13■□□□□ 0.49
TMCO3-207ENST00000474393 ANXA1P04083 346 aa18.12■□□□□ 0.49
TMCO3-207ENST00000474393 DMTNQ08495 405 aa18.12■□□□□ 0.49
TMCO3-207ENST00000474393 NOLC1Q14978 699 aaKnown RBP eCLIP18.12■□□□□ 0.49
TMCO3-207ENST00000474393 CWC22Q9HCG8 908 aaKnown RBP18.12■□□□□ 0.49
TMCO3-207ENST00000474393 PHKG2P15735 406 aa18.12■□□□□ 0.49
TMCO3-207ENST00000474393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.12■□□□□ 0.491e-8■□□□□ 10.5
TMCO3-207ENST00000474393 PALD1Q9ULE6 856 aa18.12■□□□□ 0.49
TMCO3-207ENST00000474393 SOS2Q07890 1332 aaPredicted RBP18.11■□□□□ 0.49
TMCO3-207ENST00000474393 SIPA1L3O60292 1781 aaPredicted RBP18.11■□□□□ 0.49
TMCO3-207ENST00000474393 GIGYF1O75420 1035 aaPredicted RBP18.11■□□□□ 0.49
TMCO3-207ENST00000474393 N4BP2Q86UW6 1770 aaPredicted RBP18.11■□□□□ 0.49
TMCO3-207ENST00000474393 ADAMTS7Q9UKP4 1686 aa18.11■□□□□ 0.49
TMCO3-207ENST00000474393 HCLS1P14317 486 aaPredicted RBP18.11■□□□□ 0.49
TMCO3-207ENST00000474393 PRDM11Q9NQV5 511 aa18.11■□□□□ 0.49
TMCO3-207ENST00000474393 IFNL2Q8IZJ0 200 aa18.1■□□□□ 0.49
TMCO3-207ENST00000474393 DBF4Q9UBU7 674 aaPredicted RBP18.1■□□□□ 0.49
TMCO3-207ENST00000474393 MCM5P33992 734 aa18.1■□□□□ 0.49
TMCO3-207ENST00000474393 KDM6AO15550 1401 aaPredicted RBP18.1■□□□□ 0.49
TMCO3-207ENST00000474393 ADCY5O95622 1261 aa18.09■□□□□ 0.49
TMCO3-207ENST00000474393 MTERF4Q7Z6M4 381 aaKnown RBP18.09■□□□□ 0.49
TMCO3-207ENST00000474393 SRCIN1Q9C0H9 1055 aa18.09■□□□□ 0.49
TMCO3-207ENST00000474393 USP44Q9H0E7 712 aa18.09■□□□□ 0.49
TMCO3-207ENST00000474393 LRRFIP2Q9Y608 721 aaKnown RBP18.09■□□□□ 0.49
TMCO3-207ENST00000474393 SLC52A2Q9HAB3 445 aa18.09■□□□□ 0.49
TMCO3-207ENST00000474393 HEG1Q9ULI3 1381 aa18.09■□□□□ 0.49
TMCO3-207ENST00000474393 SCN11AQ9UI33 1791 aa18.09■□□□□ 0.49
TMCO3-207ENST00000474393 PI4KAP2A4QPH2 592 aa18.08■□□□□ 0.49
TMCO3-207ENST00000474393 UBTFL1P0CB47 393 aaPredicted RBP18.08■□□□□ 0.49
TMCO3-207ENST00000474393 PI4KAP1Q8N8J0 262 aa18.08■□□□□ 0.49
TMCO3-207ENST00000474393 SPC24Q8NBT2 197 aa18.08■□□□□ 0.49
TMCO3-207ENST00000474393 DNAAF4Q8WXU2 420 aa18.08■□□□□ 0.49
TMCO3-207ENST00000474393 PRAMEF22A3QJZ6 481 aa18.08■□□□□ 0.48
TMCO3-207ENST00000474393 U2AF2P26368 475 aaKnown RBP eCLIP18.08■□□□□ 0.482e-6■■■■□ 20.3
TMCO3-207ENST00000474393 USP48Q86UV5 1035 aa18.08■□□□□ 0.48
TMCO3-207ENST00000474393 SLC39A6Q13433 755 aa18.08■□□□□ 0.48
TMCO3-207ENST00000474393 CASC1Q6TDU7 716 aa18.08■□□□□ 0.48
TMCO3-207ENST00000474393 BCL2L12Q9HB09 334 aa18.08■□□□□ 0.48
TMCO3-207ENST00000474393 ATP8B2P98198 1209 aa18.07■□□□□ 0.48
TMCO3-207ENST00000474393 NFATC2IPQ8NCF5 419 aa18.07■□□□□ 0.48
TMCO3-207ENST00000474393 ZNF790Q6PG37 636 aa18.07■□□□□ 0.48
TMCO3-207ENST00000474393 EXOC6BQ9Y2D4 811 aa18.07■□□□□ 0.48
TMCO3-207ENST00000474393 PNMA6EA0A0J9YXQ4 647 aa18.06■□□□□ 0.48
TMCO3-207ENST00000474393 CYP27B1O15528 508 aa18.06■□□□□ 0.48
TMCO3-207ENST00000474393 MBD3O95983 291 aa18.06■□□□□ 0.48
TMCO3-207ENST00000474393 PROSER3Q2NL68 480 aa18.06■□□□□ 0.48
TMCO3-207ENST00000474393 PLEKHG2Q9H7P9 1386 aa18.05■□□□□ 0.48
TMCO3-207ENST00000474393 BEND3Q5T5X7 828 aa18.05■□□□□ 0.48
TMCO3-207ENST00000474393 KIF3AQ9Y496 699 aa18.05■□□□□ 0.48
TMCO3-207ENST00000474393 ERC2O15083 957 aa18.05■□□□□ 0.48
TMCO3-207ENST00000474393 BRD1O95696 1058 aa18.05■□□□□ 0.48
TMCO3-207ENST00000474393 TOM1L2Q6ZVM7 507 aa18.05■□□□□ 0.48
TMCO3-207ENST00000474393 PIBF1Q8WXW3 757 aa18.05■□□□□ 0.48
TMCO3-207ENST00000474393 DCAF5Q96JK2 942 aa18.05■□□□□ 0.48
TMCO3-207ENST00000474393 ANO2Q9NQ90 1003 aa18.05■□□□□ 0.48
TMCO3-207ENST00000474393 ADCY9O60503 1353 aa18.05■□□□□ 0.48
TMCO3-207ENST00000474393 WDR17Q8IZU2 1322 aa18.05■□□□□ 0.48
TMCO3-207ENST00000474393 RILPL2Q969X0 211 aa18.04■□□□□ 0.48
TMCO3-207ENST00000474393 REC8O95072 547 aa18.04■□□□□ 0.48
TMCO3-207ENST00000474393 PKD1L3Q7Z443 1732 aa18.04■□□□□ 0.48
TMCO3-207ENST00000474393 CNPY2Q9Y2B0 182 aa18.04■□□□□ 0.48
TMCO3-207ENST00000474393 HYPKQ9NX55 129 aa18.03■□□□□ 0.48
TMCO3-207ENST00000474393 PYCARDQ9ULZ3 195 aa18.03■□□□□ 0.48
TMCO3-207ENST00000474393 CHMP3Q9Y3E7 222 aa18.03■□□□□ 0.48
TMCO3-207ENST00000474393 MAP3K2Q9Y2U5 619 aa18.03■□□□□ 0.48
TMCO3-207ENST00000474393 GIMAP6Q6P9H5 292 aa18.02■□□□□ 0.48
TMCO3-207ENST00000474393 TRIM6-TRIM34B2RNG4 842 aa18.02■□□□□ 0.47
TMCO3-207ENST00000474393 AP5Z1O43299 807 aa18.02■□□□□ 0.47
TMCO3-207ENST00000474393 NBPF7P0C2Y1 421 aaPredicted RBP18.02■□□□□ 0.47
TMCO3-207ENST00000474393 LRRCC1Q9C099 1032 aa18.02■□□□□ 0.47
TMCO3-207ENST00000474393 DDX21Q9NR30 783 aaKnown RBP eCLIP18.02■□□□□ 0.47
TMCO3-207ENST00000474393 RIOK3O14730 519 aaKnown RBP18.01■□□□□ 0.47
TMCO3-207ENST00000474393 KSR2Q6VAB6 950 aa18.01■□□□□ 0.47
TMCO3-207ENST00000474393 TTC5Q8N0Z6 440 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms