RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 NPHP1O15259 732 aa26.12■■□□□ 1.77
TMEM54-204ENST00000474144 MYL6BP14649 208 aa26.12■■□□□ 1.77
TMEM54-204ENST00000474144 C9orf131Q5VYM1 1079 aa26.12■■□□□ 1.77
TMEM54-204ENST00000474144 TTLL6Q8N841 843 aa26.12■■□□□ 1.77
TMEM54-204ENST00000474144 PDE6BP35913 854 aa26.11■■□□□ 1.77
TMEM54-204ENST00000474144 ZNF622Q969S3 477 aaKnown RBP eCLIP26.11■■□□□ 1.77
TMEM54-204ENST00000474144 NIP7Q9Y221 180 aaKnown RBP eCLIP26.11■■□□□ 1.77
TMEM54-204ENST00000474144 ST5P78524 1137 aa26.1■■□□□ 1.77
TMEM54-204ENST00000474144 TTLL7Q6ZT98 887 aa26.1■■□□□ 1.77
TMEM54-204ENST00000474144 NBPF5PQ86XG9 351 aaPredicted RBP26.1■■□□□ 1.77
TMEM54-204ENST00000474144 BABAM1Q9NWV8 329 aa26.1■■□□□ 1.77
TMEM54-204ENST00000474144 FAM177BA6PVY3 158 aa26.09■■□□□ 1.77
TMEM54-204ENST00000474144 RASSF7Q02833 373 aa26.09■■□□□ 1.77
TMEM54-204ENST00000474144 SBF1O95248 1867 aa26.08■■□□□ 1.77
TMEM54-204ENST00000474144 EIF2S2P20042 333 aaKnown RBP26.08■■□□□ 1.77
TMEM54-204ENST00000474144 LAS1LQ9Y4W2 734 aaKnown RBP26.08■■□□□ 1.77
TMEM54-204ENST00000474144 RGL2O15211 777 aa26.07■■□□□ 1.76
TMEM54-204ENST00000474144 KRT24Q2M2I5 525 aa26.07■■□□□ 1.76
TMEM54-204ENST00000474144 CCDC184Q52MB2 194 aa26.07■■□□□ 1.76
TMEM54-204ENST00000474144 MAP3K15Q6ZN16 1313 aa26.07■■□□□ 1.76
TMEM54-204ENST00000474144 NUP98P52948 1817 aa26.07■■□□□ 1.76
TMEM54-204ENST00000474144 CHL1O00533 1208 aa26.06■■□□□ 1.76
TMEM54-204ENST00000474144 PDIA6Q15084 440 aa26.06■■□□□ 1.76
TMEM54-204ENST00000474144 RNF181Q9P0P0 153 aa26.06■■□□□ 1.76
TMEM54-204ENST00000474144 ZNF219Q9P2Y4 722 aaPredicted RBP26.06■■□□□ 1.76
TMEM54-204ENST00000474144 PDZRN3Q9UPQ7 1066 aa26.06■■□□□ 1.76
TMEM54-204ENST00000474144 PRELPP51888 382 aa26.05■■□□□ 1.76
TMEM54-204ENST00000474144 ZBTB3Q9H5J0 574 aa26.05■■□□□ 1.76
TMEM54-204ENST00000474144 CACNA1SQ13698 1873 aa26.04■■□□□ 1.76
TMEM54-204ENST00000474144 ERVV-1B6SEH8 477 aa26.04■■□□□ 1.76
TMEM54-204ENST00000474144 ANXA1P04083 346 aa26.04■■□□□ 1.76
TMEM54-204ENST00000474144 SRGNP10124 158 aa26.04■■□□□ 1.76
TMEM54-204ENST00000474144 PROSER3Q2NL68 480 aa26.04■■□□□ 1.76
TMEM54-204ENST00000474144 TPTE2Q6XPS3 522 aa26.04■■□□□ 1.76
TMEM54-204ENST00000474144 KIF6Q6ZMV9 814 aa26.04■■□□□ 1.76
TMEM54-204ENST00000474144 LRP10Q7Z4F1 713 aa26.04■■□□□ 1.76
TMEM54-204ENST00000474144 NECTIN2Q92692 538 aa26.04■■□□□ 1.76
TMEM54-204ENST00000474144 ERBB4Q15303 1308 aa26.04■■□□□ 1.76
TMEM54-204ENST00000474144 APAF1O14727 1248 aa26.03■■□□□ 1.76
TMEM54-204ENST00000474144 KIF3CO14782 793 aa26.03■■□□□ 1.76
TMEM54-204ENST00000474144 SENP3-EIF4A1A0A087X0R7 540 aa26.02■■□□□ 1.76
TMEM54-204ENST00000474144 ZNF316A6NFI3 1004 aaPredicted RBP26.02■■□□□ 1.76
TMEM54-204ENST00000474144 C21orf2O43822 256 aa26.02■■□□□ 1.76
TMEM54-204ENST00000474144 SLX4Q8IY92 1834 aa26.02■■□□□ 1.76
TMEM54-204ENST00000474144 NFKBIEO00221 500 aa26.01■■□□□ 1.75
TMEM54-204ENST00000474144 STYK1Q6J9G0 422 aa26.01■■□□□ 1.75
TMEM54-204ENST00000474144 MASTLQ96GX5 879 aa26.01■■□□□ 1.75
TMEM54-204ENST00000474144 GPTP24298 496 aa26■■□□□ 1.75
TMEM54-204ENST00000474144 UBN2Q6ZU65 1347 aa25.99■■□□□ 1.75
TMEM54-204ENST00000474144 NUTM1Q86Y26 1132 aa25.99■■□□□ 1.75
TMEM54-204ENST00000474144 CNKSR1Q969H4 720 aa25.99■■□□□ 1.75
TMEM54-204ENST00000474144 NMRK2Q9NPI5 230 aa25.99■■□□□ 1.75
TMEM54-204ENST00000474144 CCDC88AQ3V6T2 1871 aa25.99■■□□□ 1.75
TMEM54-204ENST00000474144 ARFGEF2Q9Y6D5 1785 aa25.98■■□□□ 1.75
TMEM54-204ENST00000474144 PRPF40BQ6NWY9 871 aaKnown RBP25.98■■□□□ 1.75
TMEM54-204ENST00000474144 TNRC6CQ9HCJ0 1690 aaKnown RBP25.98■■□□□ 1.75
TMEM54-204ENST00000474144 ABCC12Q96J65 1359 aa25.97■■□□□ 1.75
TMEM54-204ENST00000474144 KLRG2A4D1S0 409 aaPredicted RBP25.97■■□□□ 1.75
TMEM54-204ENST00000474144 GTF2E1P29083 439 aaPredicted RBP25.97■■□□□ 1.75
TMEM54-204ENST00000474144 GIGYF2Q6Y7W6 1299 aaKnown RBP25.97■■□□□ 1.75
TMEM54-204ENST00000474144 CFAP44Q96MT7 982 aa25.97■■□□□ 1.75
TMEM54-204ENST00000474144 FER1L6Q2WGJ9 1857 aa25.96■■□□□ 1.75
TMEM54-204ENST00000474144 LMNB1P20700 586 aa25.96■■□□□ 1.75
TMEM54-204ENST00000474144 ERFEQ4G0M1 354 aa25.96■■□□□ 1.75
TMEM54-204ENST00000474144 SUSD4Q5VX71 490 aa25.96■■□□□ 1.75
TMEM54-204ENST00000474144 ZNF34Q8IZ26 560 aa25.96■■□□□ 1.75
TMEM54-204ENST00000474144 MBIPQ9NS73 344 aa25.95■■□□□ 1.74
TMEM54-204ENST00000474144 NPR1P16066 1061 aa25.94■■□□□ 1.74
TMEM54-204ENST00000474144 AIMP1Q12904 312 aaKnown RBP25.94■■□□□ 1.74
TMEM54-204ENST00000474144 COPS6Q7L5N1 327 aa25.94■■□□□ 1.74
TMEM54-204ENST00000474144 XAGE3Q8WTP9 111 aa25.94■■□□□ 1.74
TMEM54-204ENST00000474144 NYXQ9GZU5 481 aa25.94■■□□□ 1.74
TMEM54-204ENST00000474144 ZNF853P0CG23 659 aa25.93■■□□□ 1.74
TMEM54-204ENST00000474144 DDX21Q9NR30 783 aaKnown RBP eCLIP25.93■■□□□ 1.74
TMEM54-204ENST00000474144 TIAM2Q8IVF5 1701 aa25.93■■□□□ 1.74
TMEM54-204ENST00000474144 C7orf43Q8WVR3 580 aa25.92■■□□□ 1.74
TMEM54-204ENST00000474144 CHPF2Q9P2E5 772 aa25.92■■□□□ 1.74
TMEM54-204ENST00000474144 NTSR2O95665 410 aa25.91■■□□□ 1.74
TMEM54-204ENST00000474144 HDGFL1Q5TGJ6 251 aa25.91■■□□□ 1.74
TMEM54-204ENST00000474144 DUSP27Q5VZP5 1158 aa25.9■■□□□ 1.74
TMEM54-204ENST00000474144 OLFM4Q6UX06 510 aa25.9■■□□□ 1.74
TMEM54-204ENST00000474144 IBTKQ9P2D0 1353 aaPredicted RBP25.9■■□□□ 1.74
TMEM54-204ENST00000474144 KDM2BQ8NHM5 1336 aa25.89■■□□□ 1.74
TMEM54-204ENST00000474144 TAOK3Q9H2K8 898 aa25.89■■□□□ 1.74
TMEM54-204ENST00000474144 RRAGCQ9HB90 399 aa25.89■■□□□ 1.74
TMEM54-204ENST00000474144 IFT57Q9NWB7 429 aa25.89■■□□□ 1.74
TMEM54-204ENST00000474144 ZC3H4Q9UPT8 1303 aaKnown RBP25.88■■□□□ 1.73
TMEM54-204ENST00000474144 ANP32CO43423 234 aa25.88■■□□□ 1.73
TMEM54-204ENST00000474144 HOXB7P09629 217 aa25.88■■□□□ 1.73
TMEM54-204ENST00000474144 CRY2Q49AN0 593 aa25.88■■□□□ 1.73
TMEM54-204ENST00000474144 ANKRD36CQ5JPF3 1778 aa25.87■■□□□ 1.73
TMEM54-204ENST00000474144 DICER1Q9UPY3 1922 aaKnown RBP25.87■■□□□ 1.73
TMEM54-204ENST00000474144 C3orf67Q6ZVT6 689 aa25.87■■□□□ 1.73
TMEM54-204ENST00000474144 PPP1R42Q7Z4L9 355 aa25.87■■□□□ 1.73
TMEM54-204ENST00000474144 LTBP3Q9NS15 1303 aa25.87■■□□□ 1.73
TMEM54-204ENST00000474144 TOMM70O94826 608 aa25.86■■□□□ 1.73
TMEM54-204ENST00000474144 GNAI1P63096 354 aa25.86■■□□□ 1.73
TMEM54-204ENST00000474144 PARP10Q53GL7 1025 aa25.86■■□□□ 1.73
TMEM54-204ENST00000474144 SOGA3Q5TF21 947 aa25.86■■□□□ 1.73
TMEM54-204ENST00000474144 MRS2Q9HD23 443 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms