RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 ANXA1P04083 346 aa17.73■□□□□ 0.43
USF1-205ENST00000473969 SERPINB2P05120 415 aa17.73■□□□□ 0.43
USF1-205ENST00000473969 DDR1Q08345 913 aa17.73■□□□□ 0.43
USF1-205ENST00000473969 PDIA6Q15084 440 aa17.73■□□□□ 0.43
USF1-205ENST00000473969 TWISTNBQ3B726 338 aaPredicted RBP17.73■□□□□ 0.43
USF1-205ENST00000473969 HYPKQ9NX55 129 aa17.73■□□□□ 0.43
USF1-205ENST00000473969 FANCIQ9NVI1 1328 aa17.72■□□□□ 0.43
USF1-205ENST00000473969 TTLL7Q6ZT98 887 aa17.72■□□□□ 0.43
USF1-205ENST00000473969 STK31Q9BXU1 1019 aa17.72■□□□□ 0.43
USF1-205ENST00000473969 ZBTB3Q9H5J0 574 aa17.72■□□□□ 0.43
USF1-205ENST00000473969 NIP7Q9Y221 180 aaKnown RBP eCLIP17.72■□□□□ 0.43
USF1-205ENST00000473969 CARMIL3Q8ND23 1372 aa17.71■□□□□ 0.43
USF1-205ENST00000473969 TGFB2P61812 414 aa17.71■□□□□ 0.43
USF1-205ENST00000473969 PROSER3Q2NL68 480 aa17.71■□□□□ 0.43
USF1-205ENST00000473969 COPS6Q7L5N1 327 aa17.71■□□□□ 0.43
USF1-205ENST00000473969 PELP1Q8IZL8 1130 aaKnown RBP17.71■□□□□ 0.43
USF1-205ENST00000473969 NLGN2Q8NFZ4 835 aa17.71■□□□□ 0.43
USF1-205ENST00000473969 XAGE3Q8WTP9 111 aa17.71■□□□□ 0.43
USF1-205ENST00000473969 GPR162Q16538 588 aa17.7■□□□□ 0.42
USF1-205ENST00000473969 TSPYL6Q8N831 410 aa17.7■□□□□ 0.42
USF1-205ENST00000473969 E9PSI1 815 aa17.69■□□□□ 0.42
USF1-205ENST00000473969 GTF2E1P29083 439 aaPredicted RBP17.69■□□□□ 0.42
USF1-205ENST00000473969 EXOSC9Q06265 439 aaKnown RBP17.69■□□□□ 0.42
USF1-205ENST00000473969 HLFQ16534 295 aa17.69■□□□□ 0.42
USF1-205ENST00000473969 NBPF5PQ86XG9 351 aaPredicted RBP17.69■□□□□ 0.42
USF1-205ENST00000473969 ST5P78524 1137 aa17.68■□□□□ 0.42
USF1-205ENST00000473969 HSP90AB3PQ58FF7 597 aa17.68■□□□□ 0.42
USF1-205ENST00000473969 TPTE2Q6XPS3 522 aa17.68■□□□□ 0.42
USF1-205ENST00000473969 GIGYF2Q6Y7W6 1299 aaKnown RBP17.68■□□□□ 0.42
USF1-205ENST00000473969 CNBD1Q8NA66 436 aa17.68■□□□□ 0.42
USF1-205ENST00000473969 ZNF521Q96K83 1311 aa17.68■□□□□ 0.42
USF1-205ENST00000473969 FAM177BA6PVY3 158 aa17.67■□□□□ 0.42
USF1-205ENST00000473969 LRP10Q7Z4F1 713 aa17.67■□□□□ 0.42
USF1-205ENST00000473969 NYXQ9GZU5 481 aa17.67■□□□□ 0.42
USF1-205ENST00000473969 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
USF1-205ENST00000473969 SCN7AQ01118 1682 aa17.67■□□□□ 0.42
USF1-205ENST00000473969 C10orf71Q711Q0 1435 aa17.66■□□□□ 0.42
USF1-205ENST00000473969 DDX58O95786 925 aaKnown RBP17.66■□□□□ 0.42
USF1-205ENST00000473969 GPTP24298 496 aa17.66■□□□□ 0.42
USF1-205ENST00000473969 ANKRD13DQ6ZTN6 518 aa17.66■□□□□ 0.42
USF1-205ENST00000473969 PLBD2Q8NHP8 589 aa17.66■□□□□ 0.42
USF1-205ENST00000473969 A0A0G2JLW4 131 aa17.65■□□□□ 0.42
USF1-205ENST00000473969 HNRNPUQ00839 825 aaKnown RBP eCLIP17.65■□□□□ 0.42
USF1-205ENST00000473969 PARP10Q53GL7 1025 aa17.65■□□□□ 0.42
USF1-205ENST00000473969 PPP1R42Q7Z4L9 355 aa17.65■□□□□ 0.42
USF1-205ENST00000473969 RIC3Q7Z5B4 369 aa17.65■□□□□ 0.42
USF1-205ENST00000473969 TCERG1O14776 1098 aaKnown RBP17.64■□□□□ 0.41
USF1-205ENST00000473969 VAMP4O75379 141 aa17.64■□□□□ 0.41
USF1-205ENST00000473969 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
USF1-205ENST00000473969 DPEP1P16444 411 aa17.64■□□□□ 0.41
USF1-205ENST00000473969 PDE6BP35913 854 aa17.64■□□□□ 0.41
USF1-205ENST00000473969 PRR5LQ6MZQ0 368 aa17.64■□□□□ 0.41
USF1-205ENST00000473969 BRIP1Q9BX63 1249 aa17.64■□□□□ 0.41
USF1-205ENST00000473969 PDZRN3Q9UPQ7 1066 aa17.64■□□□□ 0.41
USF1-205ENST00000473969 BCORQ6W2J9 1755 aa17.63■□□□□ 0.41
USF1-205ENST00000473969 H0YIN7 160 aa17.63■□□□□ 0.41
USF1-205ENST00000473969 GRIN3BO60391 1043 aa17.63■□□□□ 0.41
USF1-205ENST00000473969 SLFN5Q08AF3 891 aa17.63■□□□□ 0.41
USF1-205ENST00000473969 PHAXQ9H814 394 aaKnown RBP17.63■□□□□ 0.41
USF1-205ENST00000473969 ATP10DQ9P241 1426 aa17.63■□□□□ 0.41
USF1-205ENST00000473969 TCIRG1Q13488 830 aa17.62■□□□□ 0.41
USF1-205ENST00000473969 C2CD5Q86YS7 1000 aa17.62■□□□□ 0.41
USF1-205ENST00000473969 ZNF34Q8IZ26 560 aa17.62■□□□□ 0.41
USF1-205ENST00000473969 CCDC24Q8N4L8 307 aa17.62■□□□□ 0.41
USF1-205ENST00000473969 PIM2Q9P1W9 311 aa17.62■□□□□ 0.41
USF1-205ENST00000473969 WWC3Q9ULE0 1092 aa17.62■□□□□ 0.41
USF1-205ENST00000473969 BCS1LQ9Y276 419 aa17.61■□□□□ 0.41
USF1-205ENST00000473969 CHRNA5P30532 468 aa17.6■□□□□ 0.41
USF1-205ENST00000473969 SUSD4Q5VX71 490 aa17.6■□□□□ 0.41
USF1-205ENST00000473969 CDCA7LQ96GN5 454 aa17.6■□□□□ 0.41
USF1-205ENST00000473969 UTP14AQ9BVJ6 771 aaKnown RBP17.6■□□□□ 0.41
USF1-205ENST00000473969 PXDNLA1KZ92 1463 aa17.6■□□□□ 0.41
USF1-205ENST00000473969 DALRD3Q5D0E6 543 aaKnown RBP17.59■□□□□ 0.41
USF1-205ENST00000473969 ZNF622Q969S3 477 aaKnown RBP eCLIP17.59■□□□□ 0.417e-6■■□□□ 12.8
USF1-205ENST00000473969 UBN2Q6ZU65 1347 aa17.58■□□□□ 0.4
USF1-205ENST00000473969 NEXNQ0ZGT2 675 aa17.58■□□□□ 0.4
USF1-205ENST00000473969 FKBP5Q13451 457 aaPredicted RBP17.58■□□□□ 0.4
USF1-205ENST00000473969 NUTM1Q86Y26 1132 aa17.58■□□□□ 0.4
USF1-205ENST00000473969 YBX3P16989 372 aaKnown RBP eCLIP17.57■□□□□ 0.4
USF1-205ENST00000473969 FLIIQ13045 1269 aa17.57■□□□□ 0.4
USF1-205ENST00000473969 ERFEQ4G0M1 354 aa17.57■□□□□ 0.4
USF1-205ENST00000473969 KSR2Q6VAB6 950 aa17.57■□□□□ 0.4
USF1-205ENST00000473969 NLRP10Q86W26 655 aa17.57■□□□□ 0.4
USF1-205ENST00000473969 MYD88Q99836 296 aa17.57■□□□□ 0.4
USF1-205ENST00000473969 TRMT112Q9UI30 125 aaKnown RBP17.57■□□□□ 0.4
USF1-205ENST00000473969 NRXN2Q9P2S2 1712 aa17.57■□□□□ 0.4
USF1-205ENST00000473969 AFDNP55196 1824 aaKnown RBP17.56■□□□□ 0.4
USF1-205ENST00000473969 KIF13BQ9NQT8 1826 aa17.56■□□□□ 0.4
USF1-205ENST00000473969 IBTKQ9P2D0 1353 aaPredicted RBP17.56■□□□□ 0.4
USF1-205ENST00000473969 RNF123Q5XPI4 1314 aa17.56■□□□□ 0.4
USF1-205ENST00000473969 PI4KAP2A4QPH2 592 aa17.56■□□□□ 0.4
USF1-205ENST00000473969 ATP5J2-PTCD1G3V325 749 aa17.56■□□□□ 0.4
USF1-205ENST00000473969 KCNA3P22001 575 aa17.56■□□□□ 0.4
USF1-205ENST00000473969 TTLL6Q8N841 843 aa17.56■□□□□ 0.4
USF1-205ENST00000473969 PI4KAP1Q8N8J0 262 aa17.56■□□□□ 0.4
USF1-205ENST00000473969 ZNF428Q96B54 188 aa17.56■□□□□ 0.4
USF1-205ENST00000473969 MAP3K2Q9Y2U5 619 aa17.56■□□□□ 0.4
USF1-205ENST00000473969 NUP98P52948 1817 aa17.56■□□□□ 0.4
USF1-205ENST00000473969 NTSR2O95665 410 aa17.55■□□□□ 0.4
USF1-205ENST00000473969 G2E3Q7L622 706 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms