RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 TRAPPC3LQ5T215 181 aa5.76□□□□□ -1.49
CCDC39-203ENST00000473854 LENG1Q96BZ8 264 aaPredicted RBP5.76□□□□□ -1.49
CCDC39-203ENST00000473854 ALBP02768 609 aa5.75□□□□□ -1.49
CCDC39-203ENST00000473854 ADH7P40394 386 aa5.75□□□□□ -1.49
CCDC39-203ENST00000473854 SCNN1DP51172 638 aa5.75□□□□□ -1.49
CCDC39-203ENST00000473854 COL9A3Q14050 684 aaPredicted RBP5.75□□□□□ -1.49
CCDC39-203ENST00000473854 OXLD1Q5BKU9 147 aa5.75□□□□□ -1.49
CCDC39-203ENST00000473854 NEUROD4Q9HD90 331 aa5.75□□□□□ -1.49
CCDC39-203ENST00000473854 CABP1Q9NZU7 370 aa5.75□□□□□ -1.49
CCDC39-203ENST00000473854 HCN2Q9UL51 889 aa5.75□□□□□ -1.49
CCDC39-203ENST00000473854 RNF112Q9ULX5 631 aa5.75□□□□□ -1.49
CCDC39-203ENST00000473854 LILRB5O75023 590 aa5.74□□□□□ -1.49
CCDC39-203ENST00000473854 MTFR1Q15390 333 aa5.74□□□□□ -1.49
CCDC39-203ENST00000473854 MAP7D1Q3KQU3 841 aa5.74□□□□□ -1.49
CCDC39-203ENST00000473854 TP53INP1Q96A56 240 aa5.74□□□□□ -1.49
CCDC39-203ENST00000473854 SLC4A9Q96Q91 983 aa5.74□□□□□ -1.49
CCDC39-203ENST00000473854 STRN4Q9NRL3 753 aa5.74□□□□□ -1.49
CCDC39-203ENST00000473854 A6NJY4 79 aa5.73□□□□□ -1.49
CCDC39-203ENST00000473854 SLC51AQ86UW1 340 aa5.73□□□□□ -1.49
CCDC39-203ENST00000473854 PRM3Q9NNZ6 103 aa5.73□□□□□ -1.49
CCDC39-203ENST00000473854 STARD13Q9Y3M8 1113 aa5.73□□□□□ -1.49
CCDC39-203ENST00000473854 COL17A1Q9UMD9 1497 aaPredicted RBP5.72□□□□□ -1.49
CCDC39-203ENST00000473854 A0A0A0MRY4 1105 aa5.72□□□□□ -1.49
CCDC39-203ENST00000473854 BACH1O14867 736 aa5.72□□□□□ -1.49
CCDC39-203ENST00000473854 GPR37L1O60883 481 aa5.72□□□□□ -1.49
CCDC39-203ENST00000473854 STAU1O95793 577 aaKnown RBP5.72□□□□□ -1.49
CCDC39-203ENST00000473854 ZNF295-AS1Q8N0V1 137 aa5.72□□□□□ -1.49
CCDC39-203ENST00000473854 PHTF2Q8N3S3 785 aa5.72□□□□□ -1.49
CCDC39-203ENST00000473854 CHIC2Q9UKJ5 165 aa5.72□□□□□ -1.49
CCDC39-203ENST00000473854 IQSEC3Q9UPP2 1182 aaPredicted RBP5.72□□□□□ -1.49
CCDC39-203ENST00000473854 ARID1BQ8NFD5 2236 aaPredicted RBP5.71□□□□□ -1.49
CCDC39-203ENST00000473854 SELPP16109 830 aa5.71□□□□□ -1.5
CCDC39-203ENST00000473854 USP21Q9UK80 565 aa5.71□□□□□ -1.5
CCDC39-203ENST00000473854 SPEM2Q0P670 501 aa5.7□□□□□ -1.5
CCDC39-203ENST00000473854 C20orf204Q6ZNR8 217 aa5.7□□□□□ -1.5
CCDC39-203ENST00000473854 FMNL2Q96PY5 1086 aa5.7□□□□□ -1.5
CCDC39-203ENST00000473854 PCMTD2Q9NV79 361 aa5.7□□□□□ -1.5
CCDC39-203ENST00000473854 SERTAD1Q9UHV2 236 aa5.7□□□□□ -1.5
CCDC39-203ENST00000473854 LRRC69Q6ZNQ3 347 aa5.69□□□□□ -1.5
CCDC39-203ENST00000473854 C8orf86Q6ZUL3 223 aa5.69□□□□□ -1.5
CCDC39-203ENST00000473854 MTMR14Q8NCE2 650 aa5.69□□□□□ -1.5
CCDC39-203ENST00000473854 SSBP4Q9BWG4 385 aaPredicted RBP5.69□□□□□ -1.5
CCDC39-203ENST00000473854 EFCC1Q9HA90 598 aa5.69□□□□□ -1.5
CCDC39-203ENST00000473854 IRAK1P51617 712 aa5.68□□□□□ -1.5
CCDC39-203ENST00000473854 TEAD4Q15561 434 aa5.68□□□□□ -1.5
CCDC39-203ENST00000473854 TSGA10IPQ3SY00 556 aa5.68□□□□□ -1.5
CCDC39-203ENST00000473854 SLC30A3Q99726 388 aa5.68□□□□□ -1.5
CCDC39-203ENST00000473854 ANKIB1Q9P2G1 1089 aa5.68□□□□□ -1.5
CCDC39-203ENST00000473854 TMEM229AB2RXF0 380 aa5.67□□□□□ -1.5
CCDC39-203ENST00000473854 EML1O00423 815 aa5.67□□□□□ -1.5
CCDC39-203ENST00000473854 KCNQ4P56696 695 aa5.67□□□□□ -1.5
CCDC39-203ENST00000473854 DTWD1Q8N5C7 304 aa5.67□□□□□ -1.5
CCDC39-203ENST00000473854 JPH1Q9HDC5 661 aaPredicted RBP5.67□□□□□ -1.5
CCDC39-203ENST00000473854 TXLNAP40222 546 aa5.66□□□□□ -1.5
CCDC39-203ENST00000473854 SFSWAPQ12872 951 aaKnown RBP5.66□□□□□ -1.5
CCDC39-203ENST00000473854 FMR1NBQ8N0W7 255 aaPredicted RBP5.66□□□□□ -1.5
CCDC39-203ENST00000473854 PLPP7Q8NBV4 271 aa5.66□□□□□ -1.5
CCDC39-203ENST00000473854 L3MBTL2Q969R5 705 aa5.66□□□□□ -1.5
CCDC39-203ENST00000473854 SCHIP1Q9P0W5 487 aaPredicted RBP5.66□□□□□ -1.5
CCDC39-203ENST00000473854 SHISA2Q6UWI4 295 aa5.65□□□□□ -1.5
CCDC39-203ENST00000473854 RHPN1Q8TCX5 695 aa5.65□□□□□ -1.5
CCDC39-203ENST00000473854 UBE2OQ9C0C9 1292 aaKnown RBP5.65□□□□□ -1.5
CCDC39-203ENST00000473854 BRD7Q9NPI1 651 aa5.65□□□□□ -1.5
CCDC39-203ENST00000473854 ZNF232Q9UNY5 417 aa5.65□□□□□ -1.5
CCDC39-203ENST00000473854 KCNH4Q9UQ05 1017 aa5.65□□□□□ -1.5
CCDC39-203ENST00000473854 CHMP3Q9Y3E7 222 aa5.65□□□□□ -1.5
CCDC39-203ENST00000473854 PARP3Q9Y6F1 533 aa5.65□□□□□ -1.5
CCDC39-203ENST00000473854 NOS2P35228 1153 aa5.64□□□□□ -1.51
CCDC39-203ENST00000473854 PCSK7Q16549 785 aa5.64□□□□□ -1.51
CCDC39-203ENST00000473854 CEP63Q96MT8 703 aa5.64□□□□□ -1.51
CCDC39-203ENST00000473854 SLC6A14Q9UN76 642 aa5.64□□□□□ -1.51
CCDC39-203ENST00000473854 USP3Q9Y6I4 520 aa5.64□□□□□ -1.51
CCDC39-203ENST00000473854 SERTM1A2A2V5 107 aa5.63□□□□□ -1.51
CCDC39-203ENST00000473854 LZTS3O60299 673 aaPredicted RBP5.63□□□□□ -1.51
CCDC39-203ENST00000473854 SOX11P35716 441 aa5.63□□□□□ -1.51
CCDC39-203ENST00000473854 HIF1AQ16665 826 aa5.63□□□□□ -1.51
CCDC39-203ENST00000473854 C1orf53Q5VUE5 145 aa5.63□□□□□ -1.51
CCDC39-203ENST00000473854 PRR23CQ6ZRP0 262 aa5.63□□□□□ -1.51
CCDC39-203ENST00000473854 WFDC12Q8WWY7 111 aa5.63□□□□□ -1.51
CCDC39-203ENST00000473854 RGS9O75916 674 aaPredicted RBP5.62□□□□□ -1.51
CCDC39-203ENST00000473854 TBC1D8BQ0IIM8 1120 aa5.62□□□□□ -1.51
CCDC39-203ENST00000473854 RAB44Q7Z6P3 723 aaPredicted RBP5.62□□□□□ -1.51
CCDC39-203ENST00000473854 ZDHHC1Q8WTX9 485 aa5.62□□□□□ -1.51
CCDC39-203ENST00000473854 BHMTQ93088 406 aa5.62□□□□□ -1.51
CCDC39-203ENST00000473854 KRTAP4-11Q9BYQ6 195 aa5.62□□□□□ -1.51
CCDC39-203ENST00000473854 GSC2O15499 205 aa5.61□□□□□ -1.51
CCDC39-203ENST00000473854 AFF1P51825 1210 aaKnown RBP5.61□□□□□ -1.51
CCDC39-203ENST00000473854 WASHC4Q2M389 1173 aa5.61□□□□□ -1.51
CCDC39-203ENST00000473854 EML3Q32P44 896 aa5.61□□□□□ -1.51
CCDC39-203ENST00000473854 PSAPL1Q6NUJ1 521 aa5.61□□□□□ -1.51
CCDC39-203ENST00000473854 IGF2-ASQ6U949 168 aa5.61□□□□□ -1.51
CCDC39-203ENST00000473854 FBXO11Q86XK2 927 aa5.61□□□□□ -1.51
CCDC39-203ENST00000473854 DMRTC2Q8IXT2 367 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-203ENST00000473854 NOD1Q9Y239 953 aa5.61□□□□□ -1.51
CCDC39-203ENST00000473854 PTCD1O75127 700 aaKnown RBP5.6□□□□□ -1.51
CCDC39-203ENST00000473854 FSTP19883 344 aa5.6□□□□□ -1.51
CCDC39-203ENST00000473854 IREB2P48200 963 aaKnown RBP5.6□□□□□ -1.51
CCDC39-203ENST00000473854 CD97P48960 835 aa5.6□□□□□ -1.51
CCDC39-203ENST00000473854 HIRAP54198 1017 aaPredicted RBP5.6□□□□□ -1.51
CCDC39-203ENST00000473854 TYRO3Q06418 890 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms