RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 BRPF1P55201 1214 aaPredicted RBP11.69□□□□□ -0.54
SMG5-203ENST00000473643 ALDH1L2Q3SY69 923 aa11.69□□□□□ -0.54
SMG5-203ENST00000473643 TBC1D2BQ9UPU7 963 aa11.69□□□□□ -0.54
SMG5-203ENST00000473643 VIRMAQ69YN4 1812 aaKnown RBP11.69□□□□□ -0.54
SMG5-203ENST00000473643 PXDNLA1KZ92 1463 aa11.69□□□□□ -0.54
SMG5-203ENST00000473643 NBPF26B4DH59 902 aa11.68□□□□□ -0.54
SMG5-203ENST00000473643 RARSP54136 660 aaKnown RBP11.68□□□□□ -0.54
SMG5-203ENST00000473643 NBPF10Q6P3W6 841 aaKnown RBP11.68□□□□□ -0.54
SMG5-203ENST00000473643 NBPF15Q8N660 670 aa11.68□□□□□ -0.54
SMG5-203ENST00000473643 RCAN3Q9UKA8 241 aa11.68□□□□□ -0.54
SMG5-203ENST00000473643 ERBB4Q15303 1308 aa11.67□□□□□ -0.54
SMG5-203ENST00000473643 C4AP0C0L4 1744 aa11.67□□□□□ -0.54
SMG5-203ENST00000473643 CAMTA2O94983 1202 aa11.67□□□□□ -0.54
SMG5-203ENST00000473643 SERPINB2P05120 415 aa11.67□□□□□ -0.54
SMG5-203ENST00000473643 HDGFL1Q5TGJ6 251 aa11.67□□□□□ -0.54
SMG5-203ENST00000473643 CCDC30Q5VVM6 783 aa11.67□□□□□ -0.54
SMG5-203ENST00000473643 NPM2Q86SE8 214 aaKnown RBP11.67□□□□□ -0.54
SMG5-203ENST00000473643 WWC3Q9ULE0 1092 aa11.67□□□□□ -0.54
SMG5-203ENST00000473643 RGL2O15211 777 aa11.66□□□□□ -0.54
SMG5-203ENST00000473643 PIP4K2AP48426 406 aaPredicted RBP11.66□□□□□ -0.54
SMG5-203ENST00000473643 TBC1D9BQ66K14 1250 aa11.66□□□□□ -0.54
SMG5-203ENST00000473643 CLEC4GQ6UXB4 293 aa11.66□□□□□ -0.54
SMG5-203ENST00000473643 SSH1Q8WYL5 1049 aa11.66□□□□□ -0.54
SMG5-203ENST00000473643 PIM2Q9P1W9 311 aa11.66□□□□□ -0.54
SMG5-203ENST00000473643 ZNF330Q9Y3S2 320 aaPredicted RBP11.66□□□□□ -0.54
SMG5-203ENST00000473643 EIF2S2P20042 333 aaKnown RBP11.65□□□□□ -0.54
SMG5-203ENST00000473643 PDIA6Q15084 440 aa11.65□□□□□ -0.54
SMG5-203ENST00000473643 BICDL1Q6ZP65 573 aa11.65□□□□□ -0.54
SMG5-203ENST00000473643 DZIP3Q86Y13 1208 aaKnown RBP11.65□□□□□ -0.54
SMG5-203ENST00000473643 MRPL50Q8N5N7 158 aaKnown RBP11.65□□□□□ -0.54
SMG5-203ENST00000473643 DDX21Q9NR30 783 aaKnown RBP eCLIP11.65□□□□□ -0.54
SMG5-203ENST00000473643 DBF4Q9UBU7 674 aaPredicted RBP11.65□□□□□ -0.54
SMG5-203ENST00000473643 BCS1LQ9Y276 419 aa11.65□□□□□ -0.54
SMG5-203ENST00000473643 CHRNA5P30532 468 aa11.64□□□□□ -0.55
SMG5-203ENST00000473643 DALRD3Q5D0E6 543 aaKnown RBP11.64□□□□□ -0.55
SMG5-203ENST00000473643 LRP10Q7Z4F1 713 aa11.64□□□□□ -0.55
SMG5-203ENST00000473643 SETDB2Q96T68 719 aa11.64□□□□□ -0.55
SMG5-203ENST00000473643 KIF13BQ9NQT8 1826 aa11.64□□□□□ -0.55
SMG5-203ENST00000473643 RNF123Q5XPI4 1314 aa11.63□□□□□ -0.55
SMG5-203ENST00000473643 BCAR3O75815 825 aa11.63□□□□□ -0.55
SMG5-203ENST00000473643 SLC4A2P04920 1241 aa11.63□□□□□ -0.55
SMG5-203ENST00000473643 BRIP1Q9BX63 1249 aa11.63□□□□□ -0.55
SMG5-203ENST00000473643 STK31Q9BXU1 1019 aa11.63□□□□□ -0.55
SMG5-203ENST00000473643 HYPKQ9NX55 129 aa11.63□□□□□ -0.55
SMG5-203ENST00000473643 PRR5LQ6MZQ0 368 aa11.62□□□□□ -0.55
SMG5-203ENST00000473643 ARHGAP45Q92619 1136 aa11.62□□□□□ -0.55
SMG5-203ENST00000473643 NECTIN2Q92692 538 aa11.62□□□□□ -0.55
SMG5-203ENST00000473643 SMC4Q9NTJ3 1288 aa11.62□□□□□ -0.55
SMG5-203ENST00000473643 CHPF2Q9P2E5 772 aa11.62□□□□□ -0.55
SMG5-203ENST00000473643 ZNF652Q9Y2D9 606 aa11.62□□□□□ -0.55
SMG5-203ENST00000473643 KIAA1551Q9HCM1 1747 aa11.62□□□□□ -0.55
SMG5-203ENST00000473643 CARMIL3Q8ND23 1372 aa11.62□□□□□ -0.55
SMG5-203ENST00000473643 CHD4Q14839 1912 aa11.62□□□□□ -0.55
SMG5-203ENST00000473643 ERVV-1B6SEH8 477 aa11.61□□□□□ -0.55
SMG5-203ENST00000473643 H0YIN7 160 aa11.61□□□□□ -0.55
SMG5-203ENST00000473643 TCERG1O14776 1098 aaKnown RBP11.61□□□□□ -0.55
SMG5-203ENST00000473643 ARHGAP27Q6ZUM4 889 aa11.61□□□□□ -0.55
SMG5-203ENST00000473643 PDZRN3Q9UPQ7 1066 aa11.61□□□□□ -0.55
SMG5-203ENST00000473643 KIF16BQ96L93 1317 aa11.6□□□□□ -0.55
SMG5-203ENST00000473643 ADCY9O60503 1353 aa11.6□□□□□ -0.55
SMG5-203ENST00000473643 IPO8O15397 1037 aaKnown RBP11.6□□□□□ -0.55
SMG5-203ENST00000473643 PDE6BP35913 854 aa11.6□□□□□ -0.55
SMG5-203ENST00000473643 HLFQ16534 295 aa11.6□□□□□ -0.55
SMG5-203ENST00000473643 PROSER3Q2NL68 480 aa11.6□□□□□ -0.55
SMG5-203ENST00000473643 G2E3Q7L622 706 aa11.6□□□□□ -0.55
SMG5-203ENST00000473643 C2CD5Q86YS7 1000 aa11.6□□□□□ -0.55
SMG5-203ENST00000473643 BCL2L13Q9BXK5 485 aa11.6□□□□□ -0.55
SMG5-203ENST00000473643 NOB1Q9ULX3 412 aaKnown RBP11.6□□□□□ -0.55
SMG5-203ENST00000473643 PTPRCP08575 1304 aa11.6□□□□□ -0.55
SMG5-203ENST00000473643 FLIIQ13045 1269 aa11.59□□□□□ -0.55
SMG5-203ENST00000473643 TPTE2Q6XPS3 522 aa11.59□□□□□ -0.55
SMG5-203ENST00000473643 TTLL7Q6ZT98 887 aa11.59□□□□□ -0.55
SMG5-203ENST00000473643 CCDC24Q8N4L8 307 aa11.59□□□□□ -0.55
SMG5-203ENST00000473643 TTLL6Q8N841 843 aa11.59□□□□□ -0.55
SMG5-203ENST00000473643 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.59□□□□□ -0.55
SMG5-203ENST00000473643 CNBD1Q8NA66 436 aa11.59□□□□□ -0.55
SMG5-203ENST00000473643 PHAXQ9H814 394 aaKnown RBP11.59□□□□□ -0.55
SMG5-203ENST00000473643 NIP7Q9Y221 180 aaKnown RBP eCLIP11.59□□□□□ -0.55
SMG5-203ENST00000473643 SUPT16HQ9Y5B9 1047 aaKnown RBP11.59□□□□□ -0.55
SMG5-203ENST00000473643 NRXN2Q9P2S2 1712 aa11.59□□□□□ -0.55
SMG5-203ENST00000473643 KLRG2A4D1S0 409 aaPredicted RBP11.58□□□□□ -0.56
SMG5-203ENST00000473643 ANXA1P04083 346 aa11.58□□□□□ -0.56
SMG5-203ENST00000473643 MYL6BP14649 208 aa11.58□□□□□ -0.56
SMG5-203ENST00000473643 RRP1P56182 461 aaKnown RBP11.58□□□□□ -0.56
SMG5-203ENST00000473643 ZKSCAN2Q63HK3 967 aa11.58□□□□□ -0.56
SMG5-203ENST00000473643 COPS6Q7L5N1 327 aa11.58□□□□□ -0.56
SMG5-203ENST00000473643 NBPF5PQ86XG9 351 aaPredicted RBP11.58□□□□□ -0.56
SMG5-203ENST00000473643 API5Q9BZZ5 524 aaKnown RBP11.58□□□□□ -0.56
SMG5-203ENST00000473643 LAMB4A4D0S4 1761 aa11.58□□□□□ -0.56
SMG5-203ENST00000473643 N4BP2Q86UW6 1770 aaPredicted RBP11.58□□□□□ -0.56
SMG5-203ENST00000473643 ATP10DQ9P241 1426 aa11.58□□□□□ -0.56
SMG5-203ENST00000473643 MAP3K15Q6ZN16 1313 aa11.58□□□□□ -0.56
SMG5-203ENST00000473643 SRGNP10124 158 aa11.57□□□□□ -0.56
SMG5-203ENST00000473643 ST5P78524 1137 aa11.57□□□□□ -0.56
SMG5-203ENST00000473643 ATF7IPQ6VMQ6 1270 aa11.57□□□□□ -0.56
SMG5-203ENST00000473643 XAGE3Q8WTP9 111 aa11.57□□□□□ -0.56
SMG5-203ENST00000473643 MS4A1P11836 297 aa11.56□□□□□ -0.56
SMG5-203ENST00000473643 TRIM27P14373 513 aa11.56□□□□□ -0.56
SMG5-203ENST00000473643 PDE3AQ14432 1141 aa11.56□□□□□ -0.56
SMG5-203ENST00000473643 STYK1Q6J9G0 422 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms