RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 ERVV-1B6SEH8 477 aa27.25■■□□□ 1.95
EPHB3-202ENST00000473079 ANKRD31Q8N7Z5 1873 aa27.24■■□□□ 1.95
EPHB3-202ENST00000473079 NPHP1O15259 732 aa27.24■■□□□ 1.95
EPHB3-202ENST00000473079 NBPF5PQ86XG9 351 aaPredicted RBP27.24■■□□□ 1.95
EPHB3-202ENST00000473079 CCDC24Q8N4L8 307 aa27.24■■□□□ 1.95
EPHB3-202ENST00000473079 NIP7Q9Y221 180 aaKnown RBP eCLIP27.24■■□□□ 1.95
EPHB3-202ENST00000473079 RRP7AQ9Y3A4 280 aaKnown RBP27.24■■□□□ 1.95
EPHB3-202ENST00000473079 HLFQ16534 295 aa27.23■■□□□ 1.95
EPHB3-202ENST00000473079 TPTE2Q6XPS3 522 aa27.23■■□□□ 1.95
EPHB3-202ENST00000473079 TRIM35Q9UPQ4 493 aa27.23■■□□□ 1.95
EPHB3-202ENST00000473079 NEUROD2Q15784 382 aa27.22■■□□□ 1.95
EPHB3-202ENST00000473079 ZNF622Q969S3 477 aaKnown RBP eCLIP27.22■■□□□ 1.95
EPHB3-202ENST00000473079 CHL1O00533 1208 aa27.21■■□□□ 1.95
EPHB3-202ENST00000473079 SRGNP10124 158 aa27.21■■□□□ 1.95
EPHB3-202ENST00000473079 STYK1Q6J9G0 422 aa27.21■■□□□ 1.95
EPHB3-202ENST00000473079 MAP3K15Q6ZN16 1313 aa27.2■■□□□ 1.95
EPHB3-202ENST00000473079 KLRG2A4D1S0 409 aaPredicted RBP27.2■■□□□ 1.94
EPHB3-202ENST00000473079 KIF3CO14782 793 aa27.2■■□□□ 1.94
EPHB3-202ENST00000473079 RNF181Q9P0P0 153 aa27.2■■□□□ 1.94
EPHB3-202ENST00000473079 MYL6BP14649 208 aa27.19■■□□□ 1.94
EPHB3-202ENST00000473079 KIF6Q6ZMV9 814 aa27.19■■□□□ 1.94
EPHB3-202ENST00000473079 TTLL7Q6ZT98 887 aa27.19■■□□□ 1.94
EPHB3-202ENST00000473079 NGEFQ8N5V2 710 aa27.19■■□□□ 1.94
EPHB3-202ENST00000473079 CNKSR1Q969H4 720 aa27.19■■□□□ 1.94
EPHB3-202ENST00000473079 PDIA6Q15084 440 aa27.18■■□□□ 1.94
EPHB3-202ENST00000473079 MASTLQ96GX5 879 aa27.18■■□□□ 1.94
EPHB3-202ENST00000473079 SENP3-EIF4A1A0A087X0R7 540 aa27.17■■□□□ 1.94
EPHB3-202ENST00000473079 LMNB1P20700 586 aa27.17■■□□□ 1.94
EPHB3-202ENST00000473079 LRP10Q7Z4F1 713 aa27.17■■□□□ 1.94
EPHB3-202ENST00000473079 ZC3H4Q9UPT8 1303 aaKnown RBP27.16■■□□□ 1.94
EPHB3-202ENST00000473079 COL11A2P13942 1736 aaPredicted RBP27.16■■□□□ 1.94
EPHB3-202ENST00000473079 NFKBIEO00221 500 aa27.15■■□□□ 1.94
EPHB3-202ENST00000473079 RASSF7Q02833 373 aa27.15■■□□□ 1.94
EPHB3-202ENST00000473079 C21orf2O43822 256 aa27.14■■□□□ 1.94
EPHB3-202ENST00000473079 EIF2S2P20042 333 aaKnown RBP27.14■■□□□ 1.94
EPHB3-202ENST00000473079 NYXQ9GZU5 481 aa27.14■■□□□ 1.94
EPHB3-202ENST00000473079 SBF1O95248 1867 aa27.14■■□□□ 1.94
EPHB3-202ENST00000473079 NPR1P16066 1061 aa27.13■■□□□ 1.93
EPHB3-202ENST00000473079 PRELPP51888 382 aa27.13■■□□□ 1.93
EPHB3-202ENST00000473079 GIGYF2Q6Y7W6 1299 aaKnown RBP27.13■■□□□ 1.93
EPHB3-202ENST00000473079 KDM2BQ8NHM5 1336 aa27.13■■□□□ 1.93
EPHB3-202ENST00000473079 SOGA3Q5TF21 947 aa27.12■■□□□ 1.93
EPHB3-202ENST00000473079 PRPF40BQ6NWY9 871 aaKnown RBP27.12■■□□□ 1.93
EPHB3-202ENST00000473079 ZNF34Q8IZ26 560 aa27.12■■□□□ 1.93
EPHB3-202ENST00000473079 CFAP44Q96MT7 982 aa27.12■■□□□ 1.93
EPHB3-202ENST00000473079 ZBTB3Q9H5J0 574 aa27.12■■□□□ 1.93
EPHB3-202ENST00000473079 FAM177BA6PVY3 158 aa27.11■■□□□ 1.93
EPHB3-202ENST00000473079 GTF2E1P29083 439 aaPredicted RBP27.11■■□□□ 1.93
EPHB3-202ENST00000473079 NMRK2Q9NPI5 230 aa27.11■■□□□ 1.93
EPHB3-202ENST00000473079 LTBP3Q9NS15 1303 aa27.11■■□□□ 1.93
EPHB3-202ENST00000473079 IBTKQ9P2D0 1353 aaPredicted RBP27.1■■□□□ 1.93
EPHB3-202ENST00000473079 TOMM70O94826 608 aa27.1■■□□□ 1.93
EPHB3-202ENST00000473079 LAS1LQ9Y4W2 734 aaKnown RBP27.1■■□□□ 1.93
EPHB3-202ENST00000473079 APAF1O14727 1248 aa27.09■■□□□ 1.93
EPHB3-202ENST00000473079 HOXB7P09629 217 aa27.09■■□□□ 1.93
EPHB3-202ENST00000473079 PROSER3Q2NL68 480 aa27.09■■□□□ 1.93
EPHB3-202ENST00000473079 C7orf43Q8WVR3 580 aa27.09■■□□□ 1.93
EPHB3-202ENST00000473079 NUP98P52948 1817 aa27.09■■□□□ 1.93
EPHB3-202ENST00000473079 ZNF316A6NFI3 1004 aaPredicted RBP27.08■■□□□ 1.93
EPHB3-202ENST00000473079 DDX21Q9NR30 783 aaKnown RBP eCLIP27.08■■□□□ 1.93
EPHB3-202ENST00000473079 ZNF219Q9P2Y4 722 aaPredicted RBP27.08■■□□□ 1.93
EPHB3-202ENST00000473079 UBN2Q6ZU65 1347 aa27.08■■□□□ 1.93
EPHB3-202ENST00000473079 KRT24Q2M2I5 525 aa27.07■■□□□ 1.92
EPHB3-202ENST00000473079 CRY2Q49AN0 593 aa27.07■■□□□ 1.92
EPHB3-202ENST00000473079 PARP10Q53GL7 1025 aa27.07■■□□□ 1.92
EPHB3-202ENST00000473079 ZNF853P0CG23 659 aa27.06■■□□□ 1.92
EPHB3-202ENST00000473079 GPTP24298 496 aa27.06■■□□□ 1.92
EPHB3-202ENST00000473079 ALDH1B1P30837 517 aa27.06■■□□□ 1.92
EPHB3-202ENST00000473079 SUSD4Q5VX71 490 aa27.06■■□□□ 1.92
EPHB3-202ENST00000473079 SLX4Q8IY92 1834 aa27.06■■□□□ 1.92
EPHB3-202ENST00000473079 RIC1Q4ADV7 1423 aa27.06■■□□□ 1.92
EPHB3-202ENST00000473079 ARFGEF2Q9Y6D5 1785 aa27.05■■□□□ 1.92
EPHB3-202ENST00000473079 ANXA1P04083 346 aa27.05■■□□□ 1.92
EPHB3-202ENST00000473079 HSPA6P17066 643 aa27.05■■□□□ 1.92
EPHB3-202ENST00000473079 CALD1Q05682 793 aaKnown RBP27.05■■□□□ 1.92
EPHB3-202ENST00000473079 ERFEQ4G0M1 354 aa27.05■■□□□ 1.92
EPHB3-202ENST00000473079 COPS6Q7L5N1 327 aa27.05■■□□□ 1.92
EPHB3-202ENST00000473079 NUTM1Q86Y26 1132 aa27.05■■□□□ 1.92
EPHB3-202ENST00000473079 TAOK3Q9H2K8 898 aa27.05■■□□□ 1.92
EPHB3-202ENST00000473079 GLTPD2A6NH11 291 aa27.04■■□□□ 1.92
EPHB3-202ENST00000473079 PPP1R42Q7Z4L9 355 aa27.04■■□□□ 1.92
EPHB3-202ENST00000473079 NECTIN2Q92692 538 aa27.04■■□□□ 1.92
EPHB3-202ENST00000473079 FER1L6Q2WGJ9 1857 aa27.04■■□□□ 1.92
EPHB3-202ENST00000473079 NTSR2O95665 410 aa27.03■■□□□ 1.92
EPHB3-202ENST00000473079 ABCC12Q96J65 1359 aa27.03■■□□□ 1.92
EPHB3-202ENST00000473079 MBIPQ9NS73 344 aa27.03■■□□□ 1.92
EPHB3-202ENST00000473079 IFT57Q9NWB7 429 aa27.03■■□□□ 1.92
EPHB3-202ENST00000473079 HOXA10P31260 410 aaPredicted RBP27.02■■□□□ 1.92
EPHB3-202ENST00000473079 GNAI1P63096 354 aa27.02■■□□□ 1.92
EPHB3-202ENST00000473079 CCDC184Q52MB2 194 aa27.02■■□□□ 1.92
EPHB3-202ENST00000473079 CCDC93Q567U6 631 aa27.02■■□□□ 1.92
EPHB3-202ENST00000473079 HSP90AB3PQ58FF7 597 aa27.02■■□□□ 1.92
EPHB3-202ENST00000473079 XAGE3Q8WTP9 111 aa27.02■■□□□ 1.92
EPHB3-202ENST00000473079 RRAGCQ9HB90 399 aa27.02■■□□□ 1.92
EPHB3-202ENST00000473079 HDGFL1Q5TGJ6 251 aa27.01■■□□□ 1.91
EPHB3-202ENST00000473079 RBM46Q8TBY0 533 aaKnown RBP27.01■■□□□ 1.91
EPHB3-202ENST00000473079 SLC10A5Q5PT55 438 aa27■■□□□ 1.91
EPHB3-202ENST00000473079 DUSP27Q5VZP5 1158 aa27■■□□□ 1.91
EPHB3-202ENST00000473079 CHPF2Q9P2E5 772 aa27■■□□□ 1.91
EPHB3-202ENST00000473079 DBF4Q9UBU7 674 aaPredicted RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms