RNA–Protein interactions for RNA: ENST00000472961.1

CFHR1-204, Transcript of complement factor H related 1, humanhuman

TSL 1 (best)

Gene CFHR1, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-204ENST00000472961 LAMB4A4D0S4 1761 aa8.6□□□□□ -1.03
CFHR1-204ENST00000472961 AOC2O75106 756 aa8.59□□□□□ -1.03
CFHR1-204ENST00000472961 SRGNP10124 158 aa8.59□□□□□ -1.03
CFHR1-204ENST00000472961 DEFB115Q30KQ5 88 aa8.59□□□□□ -1.03
CFHR1-204ENST00000472961 PLEKHO1Q53GL0 409 aaPredicted RBP8.59□□□□□ -1.03
CFHR1-204ENST00000472961 CST9Q5W186 159 aa8.59□□□□□ -1.03
CFHR1-204ENST00000472961 CYP4F22Q6NT55 531 aa8.59□□□□□ -1.03
CFHR1-204ENST00000472961 AIDAQ96BJ3 306 aa8.59□□□□□ -1.03
CFHR1-204ENST00000472961 DLG5Q8TDM6 1919 aa8.58□□□□□ -1.04
CFHR1-204ENST00000472961 TRAF5O00463 557 aa8.58□□□□□ -1.04
CFHR1-204ENST00000472961 CANXP27824 592 aaKnown RBP8.58□□□□□ -1.04
CFHR1-204ENST00000472961 EAPPQ56P03 285 aaPredicted RBP8.58□□□□□ -1.04
CFHR1-204ENST00000472961 CNTROBQ8N137 903 aa8.58□□□□□ -1.04
CFHR1-204ENST00000472961 ZIC5Q96T25 663 aa8.58□□□□□ -1.04
CFHR1-204ENST00000472961 BRIP1Q9BX63 1249 aa8.58□□□□□ -1.04
CFHR1-204ENST00000472961 MCOLN1Q9GZU1 580 aa8.58□□□□□ -1.04
CFHR1-204ENST00000472961 ZNF277Q9NRM2 450 aaPredicted RBP8.58□□□□□ -1.04
CFHR1-204ENST00000472961 RNMTO43148 476 aaKnown RBP8.57□□□□□ -1.04
CFHR1-204ENST00000472961 CAMTA2O94983 1202 aa8.57□□□□□ -1.04
CFHR1-204ENST00000472961 EPHX2P34913 555 aa8.57□□□□□ -1.04
CFHR1-204ENST00000472961 IL13P35225 146 aa8.57□□□□□ -1.04
CFHR1-204ENST00000472961 AMOTQ4VCS5 1084 aa8.57□□□□□ -1.04
CFHR1-204ENST00000472961 SULT6B1Q6IMI4 303 aa8.57□□□□□ -1.04
CFHR1-204ENST00000472961 CAPNS2Q96L46 248 aa8.57□□□□□ -1.04
CFHR1-204ENST00000472961 DDX21Q9NR30 783 aaKnown RBP eCLIP8.57□□□□□ -1.04
CFHR1-204ENST00000472961 TBC1D2BQ9UPU7 963 aa8.57□□□□□ -1.04
CFHR1-204ENST00000472961 FZD9O00144 591 aa8.56□□□□□ -1.04
CFHR1-204ENST00000472961 HACL1Q9UJ83 578 aa8.56□□□□□ -1.04
CFHR1-204ENST00000472961 COL3A1P02461 1466 aaPredicted RBP8.56□□□□□ -1.04
CFHR1-204ENST00000472961 COL4A1P02462 1669 aa8.56□□□□□ -1.04
CFHR1-204ENST00000472961 ZNF646O15015 1829 aaPredicted RBP8.55□□□□□ -1.04
CFHR1-204ENST00000472961 IQCA1LA6NCM1 817 aa8.55□□□□□ -1.04
CFHR1-204ENST00000472961 PIP4K2AP48426 406 aaPredicted RBP8.55□□□□□ -1.04
CFHR1-204ENST00000472961 SCNN1DP51172 638 aa8.55□□□□□ -1.04
CFHR1-204ENST00000472961 STYK1Q6J9G0 422 aa8.55□□□□□ -1.04
CFHR1-204ENST00000472961 ZNF496Q96IT1 587 aaPredicted RBP8.55□□□□□ -1.04
CFHR1-204ENST00000472961 COL6A3P12111 3177 aa8.55□□□□□ -1.04
CFHR1-204ENST00000472961 ANKRD36CQ5JPF3 1778 aa8.55□□□□□ -1.04
CFHR1-204ENST00000472961 KDM3BQ7LBC6 1761 aa8.55□□□□□ -1.04
CFHR1-204ENST00000472961 SCN9AQ15858 1988 aa8.54□□□□□ -1.04
CFHR1-204ENST00000472961 HEG1Q9ULI3 1381 aa8.54□□□□□ -1.04
CFHR1-204ENST00000472961 PRAMEF22A3QJZ6 481 aa8.54□□□□□ -1.04
CFHR1-204ENST00000472961 KLRG2A4D1S0 409 aaPredicted RBP8.54□□□□□ -1.04
CFHR1-204ENST00000472961 KCNQ3O43525 872 aa8.54□□□□□ -1.04
CFHR1-204ENST00000472961 PDE6BP35913 854 aa8.54□□□□□ -1.04
CFHR1-204ENST00000472961 MAP2K1Q02750 393 aaPredicted RBP8.54□□□□□ -1.04
CFHR1-204ENST00000472961 FKBP4Q02790 459 aaKnown RBP eCLIP8.54□□□□□ -1.04
CFHR1-204ENST00000472961 MTHFSDQ2M296 383 aaKnown RBP8.54□□□□□ -1.04
CFHR1-204ENST00000472961 AKAP4Q5JQC9 854 aa8.54□□□□□ -1.04
CFHR1-204ENST00000472961 C1orf141Q5JVX7 400 aa8.54□□□□□ -1.04
CFHR1-204ENST00000472961 DLK2Q6UY11 383 aa8.54□□□□□ -1.04
CFHR1-204ENST00000472961 GPR101Q96P66 508 aaPredicted RBP8.54□□□□□ -1.04
CFHR1-204ENST00000472961 ABT1Q9ULW3 272 aaKnown RBP8.54□□□□□ -1.04
CFHR1-204ENST00000472961 CLEC11AQ9Y240 323 aa8.54□□□□□ -1.04
CFHR1-204ENST00000472961 DUOX1Q9NRD9 1551 aa8.53□□□□□ -1.04
CFHR1-204ENST00000472961 ABCC12Q96J65 1359 aa8.53□□□□□ -1.04
CFHR1-204ENST00000472961 A1BGP04217 495 aa8.53□□□□□ -1.04
CFHR1-204ENST00000472961 EPS15P42566 896 aa8.53□□□□□ -1.04
CFHR1-204ENST00000472961 GRM1Q13255 1194 aa8.53□□□□□ -1.04
CFHR1-204ENST00000472961 VSIG10Q8N0Z9 540 aa8.53□□□□□ -1.04
CFHR1-204ENST00000472961 MASTLQ96GX5 879 aa8.53□□□□□ -1.04
CFHR1-204ENST00000472961 TLL2Q9Y6L7 1015 aa8.53□□□□□ -1.04
CFHR1-204ENST00000472961 LRRC37AA6NMS7 1700 aa8.53□□□□□ -1.04
CFHR1-204ENST00000472961 RBBP6Q7Z6E9 1792 aaKnown RBP8.53□□□□□ -1.04
CFHR1-204ENST00000472961 PSME4Q14997 1843 aa8.52□□□□□ -1.04
CFHR1-204ENST00000472961 HMOX1P09601 288 aa8.52□□□□□ -1.05
CFHR1-204ENST00000472961 SOX10P56693 466 aa8.52□□□□□ -1.05
CFHR1-204ENST00000472961 CNBD1Q8NA66 436 aa8.52□□□□□ -1.05
CFHR1-204ENST00000472961 CNKSR1Q969H4 720 aa8.52□□□□□ -1.05
CFHR1-204ENST00000472961 PAPPA2Q9BXP8 1791 aa8.52□□□□□ -1.05
CFHR1-204ENST00000472961 DDX60Q8IY21 1712 aaKnown RBP8.51□□□□□ -1.05
CFHR1-204ENST00000472961 IARSP41252 1262 aaKnown RBP8.51□□□□□ -1.05
CFHR1-204ENST00000472961 CCDC93Q567U6 631 aa8.51□□□□□ -1.05
CFHR1-204ENST00000472961 GPC2Q8N158 579 aa8.51□□□□□ -1.05
CFHR1-204ENST00000472961 SYNE4Q8N205 404 aa8.51□□□□□ -1.05
CFHR1-204ENST00000472961 IL17REQ8NFR9 667 aa8.51□□□□□ -1.05
CFHR1-204ENST00000472961 LAMB1P07942 1786 aa8.5□□□□□ -1.05
CFHR1-204ENST00000472961 SHTN1A0MZ66 631 aa8.5□□□□□ -1.05
CFHR1-204ENST00000472961 SLC24A1O60721 1099 aa8.5□□□□□ -1.05
CFHR1-204ENST00000472961 IL6STP40189 918 aaPredicted RBP8.5□□□□□ -1.05
CFHR1-204ENST00000472961 DGKZQ13574 1117 aa8.5□□□□□ -1.05
CFHR1-204ENST00000472961 CIAPIN1Q6FI81 312 aa8.5□□□□□ -1.05
CFHR1-204ENST00000472961 SAPCD2Q86UD0 394 aa8.5□□□□□ -1.05
CFHR1-204ENST00000472961 CFAP44Q96MT7 982 aa8.5□□□□□ -1.05
CFHR1-204ENST00000472961 PDZRN3Q9UPQ7 1066 aa8.5□□□□□ -1.05
CFHR1-204ENST00000472961 RANBP2P49792 3224 aaKnown RBP8.5□□□□□ -1.05
CFHR1-204ENST00000472961 A0A0C4DFX4 3053 aa8.49□□□□□ -1.05
CFHR1-204ENST00000472961 RIC1Q4ADV7 1423 aa8.49□□□□□ -1.05
CFHR1-204ENST00000472961 NBPF26B4DH59 902 aa8.49□□□□□ -1.05
CFHR1-204ENST00000472961 HIRAP54198 1017 aaPredicted RBP8.49□□□□□ -1.05
CFHR1-204ENST00000472961 NBPF10Q6P3W6 841 aaKnown RBP8.49□□□□□ -1.05
CFHR1-204ENST00000472961 PNMA8AQ86V59 439 aaPredicted RBP8.49□□□□□ -1.05
CFHR1-204ENST00000472961 NBPF15Q8N660 670 aa8.49□□□□□ -1.05
CFHR1-204ENST00000472961 SETDB2Q96T68 719 aa8.49□□□□□ -1.05
CFHR1-204ENST00000472961 GLIS2Q9BZE0 524 aaPredicted RBP8.49□□□□□ -1.05
CFHR1-204ENST00000472961 PANK3Q9H999 370 aa8.49□□□□□ -1.05
CFHR1-204ENST00000472961 ZNF330Q9Y3S2 320 aaPredicted RBP8.49□□□□□ -1.05
CFHR1-204ENST00000472961 USP16Q9Y5T5 823 aa8.49□□□□□ -1.05
CFHR1-204ENST00000472961 CEMIPQ8WUJ3 1361 aa8.48□□□□□ -1.05
CFHR1-204ENST00000472961 FAM155AB1AL88 458 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms