RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 FAM83GA6ND36 823 aa9.55□□□□□ -0.88
CCDC171-205ENST00000472806 HOXC9P31274 260 aa9.55□□□□□ -0.88
CCDC171-205ENST00000472806 NUCB1Q02818 461 aa9.55□□□□□ -0.88
CCDC171-205ENST00000472806 INTS3Q68E01 1043 aaKnown RBP9.55□□□□□ -0.88
CCDC171-205ENST00000472806 NUDT18Q6ZVK8 323 aa9.55□□□□□ -0.88
CCDC171-205ENST00000472806 C8orf58Q8NAV2 365 aa9.55□□□□□ -0.88
CCDC171-205ENST00000472806 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.55□□□□□ -0.88
CCDC171-205ENST00000472806 CRB1P82279 1406 aa9.55□□□□□ -0.88
CCDC171-205ENST00000472806 GNAT3A8MTJ3 354 aa9.54□□□□□ -0.88
CCDC171-205ENST00000472806 ELL2O00472 640 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-205ENST00000472806 PSME1Q06323 249 aa9.54□□□□□ -0.88
CCDC171-205ENST00000472806 DCTN1Q14203 1278 aa9.54□□□□□ -0.88
CCDC171-205ENST00000472806 CHD1LQ86WJ1 897 aa9.54□□□□□ -0.88
CCDC171-205ENST00000472806 ZNF516Q92618 1163 aa9.54□□□□□ -0.88
CCDC171-205ENST00000472806 EYA1Q99502 592 aa9.54□□□□□ -0.88
CCDC171-205ENST00000472806 NPDC1Q9NQX5 325 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-205ENST00000472806 TSPYL4Q9UJ04 414 aa9.54□□□□□ -0.88
CCDC171-205ENST00000472806 ARIH1Q9Y4X5 557 aaPredicted RBP9.54□□□□□ -0.88
CCDC171-205ENST00000472806 NWD1Q149M9 1564 aa9.54□□□□□ -0.88
CCDC171-205ENST00000472806 LCE2BO14633 110 aa9.53□□□□□ -0.88
CCDC171-205ENST00000472806 MTHFSDQ2M296 383 aaKnown RBP9.53□□□□□ -0.88
CCDC171-205ENST00000472806 MCM10Q7L590 875 aa9.53□□□□□ -0.88
CCDC171-205ENST00000472806 C14orf37Q86TY3 774 aa9.53□□□□□ -0.88
CCDC171-205ENST00000472806 RPAP2Q8IXW5 612 aaPredicted RBP9.53□□□□□ -0.88
CCDC171-205ENST00000472806 IP6K1Q92551 441 aa9.53□□□□□ -0.88
CCDC171-205ENST00000472806 STK31Q9BXU1 1019 aa9.53□□□□□ -0.88
CCDC171-205ENST00000472806 MAP3K5Q99683 1374 aa9.52□□□□□ -0.88
CCDC171-205ENST00000472806 CCT4P50991 539 aaKnown RBP9.52□□□□□ -0.89
CCDC171-205ENST00000472806 TBC1D32Q96NH3 1257 aa9.52□□□□□ -0.89
CCDC171-205ENST00000472806 MTRQ99707 1265 aa9.52□□□□□ -0.89
CCDC171-205ENST00000472806 WDR70Q9NW82 654 aa9.52□□□□□ -0.89
CCDC171-205ENST00000472806 LRRC37A3O60309 1634 aa9.52□□□□□ -0.89
CCDC171-205ENST00000472806 PHRF1Q9P1Y6 1649 aaKnown RBP9.52□□□□□ -0.89
CCDC171-205ENST00000472806 KIF1AQ12756 1690 aa9.51□□□□□ -0.89
CCDC171-205ENST00000472806 MARF1Q9Y4F3 1742 aaKnown RBP9.51□□□□□ -0.89
CCDC171-205ENST00000472806 HMMRO75330 724 aa9.51□□□□□ -0.89
CCDC171-205ENST00000472806 ESCO1Q5FWF5 840 aa9.51□□□□□ -0.89
CCDC171-205ENST00000472806 BMP2KLQ5H9B9 411 aa9.51□□□□□ -0.89
CCDC171-205ENST00000472806 CCDC30Q5VVM6 783 aa9.51□□□□□ -0.89
CCDC171-205ENST00000472806 RNF40O75150 1001 aa9.5□□□□□ -0.89
CCDC171-205ENST00000472806 APLP1P51693 650 aa9.5□□□□□ -0.89
CCDC171-205ENST00000472806 TAF7Q15545 349 aaPredicted RBP9.5□□□□□ -0.89
CCDC171-205ENST00000472806 ANKRD45Q5TZF3 282 aa9.5□□□□□ -0.89
CCDC171-205ENST00000472806 Q6ZNB5 142 aa9.5□□□□□ -0.89
CCDC171-205ENST00000472806 NFAT5O94916 1531 aa9.5□□□□□ -0.89
CCDC171-205ENST00000472806 USP19O94966 1318 aa9.5□□□□□ -0.89
CCDC171-205ENST00000472806 NCOA3Q9Y6Q9 1424 aa9.49□□□□□ -0.89
CCDC171-205ENST00000472806 HOXB7P09629 217 aa9.49□□□□□ -0.89
CCDC171-205ENST00000472806 AMOTQ4VCS5 1084 aa9.49□□□□□ -0.89
CCDC171-205ENST00000472806 PADI6Q6TGC4 694 aa9.49□□□□□ -0.89
CCDC171-205ENST00000472806 ANKRD44Q8N8A2 993 aa9.49□□□□□ -0.89
CCDC171-205ENST00000472806 NKX2-3Q8TAU0 364 aa9.49□□□□□ -0.89
CCDC171-205ENST00000472806 C22orf23Q9BZE7 217 aa9.49□□□□□ -0.89
CCDC171-205ENST00000472806 LNPKQ9C0E8 428 aa9.49□□□□□ -0.89
CCDC171-205ENST00000472806 DCTPP1Q9H773 170 aa9.49□□□□□ -0.89
CCDC171-205ENST00000472806 LTN1O94822 1766 aa9.49□□□□□ -0.89
CCDC171-205ENST00000472806 NCAPD2Q15021 1401 aa9.48□□□□□ -0.89
CCDC171-205ENST00000472806 SLIT3O75094 1523 aa9.48□□□□□ -0.89
CCDC171-205ENST00000472806 NBPF26B4DH59 902 aa9.48□□□□□ -0.89
CCDC171-205ENST00000472806 MLLT3P42568 568 aaPredicted RBP9.48□□□□□ -0.89
CCDC171-205ENST00000472806 PLEKHO1Q53GL0 409 aaPredicted RBP9.48□□□□□ -0.89
CCDC171-205ENST00000472806 NUTM2GQ5VZR2 741 aa9.48□□□□□ -0.89
CCDC171-205ENST00000472806 OVOS2A0A0G2JMS6 1433 aa9.48□□□□□ -0.89
CCDC171-205ENST00000472806 RGS12O14924 1447 aa9.48□□□□□ -0.89
CCDC171-205ENST00000472806 PXDNLA1KZ92 1463 aa9.47□□□□□ -0.89
CCDC171-205ENST00000472806 GNAI3P08754 354 aa9.47□□□□□ -0.89
CCDC171-205ENST00000472806 PPP1R18Q6NYC8 613 aa9.47□□□□□ -0.89
CCDC171-205ENST00000472806 CASC1Q6TDU7 716 aa9.47□□□□□ -0.89
CCDC171-205ENST00000472806 PROSER2Q86WR7 435 aaPredicted RBP9.47□□□□□ -0.89
CCDC171-205ENST00000472806 TTC13Q8NBP0 860 aa9.47□□□□□ -0.89
CCDC171-205ENST00000472806 CERKQ8TCT0 537 aa9.47□□□□□ -0.89
CCDC171-205ENST00000472806 LTV1Q96GA3 475 aaPredicted RBP9.47□□□□□ -0.89
CCDC171-205ENST00000472806 MSH6P52701 1360 aa9.47□□□□□ -0.89
CCDC171-205ENST00000472806 DCCP43146 1447 aa9.47□□□□□ -0.89
CCDC171-205ENST00000472806 MST1RQ04912 1400 aa9.47□□□□□ -0.89
CCDC171-205ENST00000472806 CACNA1FO60840 1977 aa9.46□□□□□ -0.89
CCDC171-205ENST00000472806 FOXO3O43524 673 aa9.46□□□□□ -0.9
CCDC171-205ENST00000472806 MFAP1P55081 439 aaKnown RBP9.46□□□□□ -0.9
CCDC171-205ENST00000472806 AKAP4Q5JQC9 854 aa9.46□□□□□ -0.9
CCDC171-205ENST00000472806 SWT1Q5T5J6 900 aaKnown RBP9.46□□□□□ -0.9
CCDC171-205ENST00000472806 C19orf44Q9H6X5 657 aa9.46□□□□□ -0.9
CCDC171-205ENST00000472806 C1orf115Q9H7X2 142 aa9.46□□□□□ -0.9
CCDC171-205ENST00000472806 PLEKHG2Q9H7P9 1386 aa9.46□□□□□ -0.9
CCDC171-205ENST00000472806 LMTK3Q96Q04 1460 aa9.46□□□□□ -0.9
CCDC171-205ENST00000472806 CDC45O75419 566 aa9.45□□□□□ -0.9
CCDC171-205ENST00000472806 GNAI2P04899 355 aa9.45□□□□□ -0.9
CCDC171-205ENST00000472806 RBM25P49756 843 aaKnown RBP9.45□□□□□ -0.9
CCDC171-205ENST00000472806 C1orf141Q5JVX7 400 aa9.45□□□□□ -0.9
CCDC171-205ENST00000472806 CEP85Q6P2H3 762 aa9.45□□□□□ -0.9
CCDC171-205ENST00000472806 HSCBQ8IWL3 235 aa9.45□□□□□ -0.9
CCDC171-205ENST00000472806 SIRT2Q8IXJ6 389 aa9.45□□□□□ -0.9
CCDC171-205ENST00000472806 HDAC5Q9UQL6 1122 aa9.45□□□□□ -0.9
CCDC171-205ENST00000472806 CEMIPQ8WUJ3 1361 aa9.45□□□□□ -0.9
CCDC171-205ENST00000472806 FAM208AQ9UK61 1670 aaKnown RBP9.45□□□□□ -0.9
CCDC171-205ENST00000472806 GCP02774 474 aa9.44□□□□□ -0.9
CCDC171-205ENST00000472806 ATF3P18847 181 aa9.44□□□□□ -0.9
CCDC171-205ENST00000472806 DEKP35659 375 aaKnown RBP9.44□□□□□ -0.9
CCDC171-205ENST00000472806 SLC4A3P48751 1232 aa9.44□□□□□ -0.9
CCDC171-205ENST00000472806 TEFQ10587 303 aa9.44□□□□□ -0.9
CCDC171-205ENST00000472806 FLIIQ13045 1269 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms