RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 EMILIN1Q9Y6C2 1016 aa8.2□□□□□ -1.1
SIK3-208ENST00000472648 CCDC93Q567U6 631 aa8.19□□□□□ -1.1
SIK3-208ENST00000472648 CST9Q5W186 159 aa8.19□□□□□ -1.1
SIK3-208ENST00000472648 STYK1Q6J9G0 422 aa8.19□□□□□ -1.1
SIK3-208ENST00000472648 GPC2Q8N158 579 aa8.19□□□□□ -1.1
SIK3-208ENST00000472648 CARD11Q9BXL7 1154 aa8.19□□□□□ -1.1
SIK3-208ENST00000472648 MKI67P46013 3256 aaKnown RBP8.19□□□□□ -1.1
SIK3-208ENST00000472648 PAPPA2Q9BXP8 1791 aa8.18□□□□□ -1.1
SIK3-208ENST00000472648 TRAF5O00463 557 aa8.18□□□□□ -1.1
SIK3-208ENST00000472648 FKBP4Q02790 459 aaKnown RBP eCLIP8.18□□□□□ -1.1
SIK3-208ENST00000472648 SAPCD2Q86UD0 394 aa8.18□□□□□ -1.1
SIK3-208ENST00000472648 DNAJC10Q8IXB1 793 aa8.18□□□□□ -1.1
SIK3-208ENST00000472648 CCDC24Q8N4L8 307 aa8.18□□□□□ -1.1
SIK3-208ENST00000472648 HHIPL1Q96JK4 782 aa8.18□□□□□ -1.1
SIK3-208ENST00000472648 BCL2L12Q9HB09 334 aa8.18□□□□□ -1.1
SIK3-208ENST00000472648 ZNF277Q9NRM2 450 aaPredicted RBP8.18□□□□□ -1.1
SIK3-208ENST00000472648 ST20-MTHFSA0A0A6YYL1 179 aa8.17□□□□□ -1.1
SIK3-208ENST00000472648 MTHFSP49914 203 aa8.17□□□□□ -1.1
SIK3-208ENST00000472648 ST5P78524 1137 aa8.17□□□□□ -1.1
SIK3-208ENST00000472648 NOGQ13253 232 aa8.17□□□□□ -1.1
SIK3-208ENST00000472648 C1orf141Q5JVX7 400 aa8.17□□□□□ -1.1
SIK3-208ENST00000472648 PRR5LQ6MZQ0 368 aa8.17□□□□□ -1.1
SIK3-208ENST00000472648 ZNF530Q6P9A1 599 aaPredicted RBP8.17□□□□□ -1.1
SIK3-208ENST00000472648 NFATC2IPQ8NCF5 419 aa8.17□□□□□ -1.1
SIK3-208ENST00000472648 MASTLQ96GX5 879 aa8.17□□□□□ -1.1
SIK3-208ENST00000472648 ZBTB1Q9Y2K1 713 aa8.17□□□□□ -1.1
SIK3-208ENST00000472648 GJA3Q9Y6H8 435 aa8.17□□□□□ -1.1
SIK3-208ENST00000472648 WASHC2AQ641Q2 1341 aa8.17□□□□□ -1.1
SIK3-208ENST00000472648 FZD9O00144 591 aa8.16□□□□□ -1.1
SIK3-208ENST00000472648 DLL1O00548 723 aa8.16□□□□□ -1.1
SIK3-208ENST00000472648 CELF2O95319 508 aaKnown RBP8.16□□□□□ -1.1
SIK3-208ENST00000472648 SRGNP10124 158 aa8.16□□□□□ -1.1
SIK3-208ENST00000472648 IARSP41252 1262 aaKnown RBP8.16□□□□□ -1.1
SIK3-208ENST00000472648 EIF6P56537 245 aaKnown RBP8.16□□□□□ -1.1
SIK3-208ENST00000472648 PLEKHO1Q53GL0 409 aaPredicted RBP8.16□□□□□ -1.1
SIK3-208ENST00000472648 AKAP4Q5JQC9 854 aa8.16□□□□□ -1.1
SIK3-208ENST00000472648 TBC1D9BQ66K14 1250 aa8.16□□□□□ -1.1
SIK3-208ENST00000472648 USP50Q70EL3 339 aaPredicted RBP8.16□□□□□ -1.1
SIK3-208ENST00000472648 CNBD1Q8NA66 436 aa8.16□□□□□ -1.1
SIK3-208ENST00000472648 JDP2Q8WYK2 163 aa8.16□□□□□ -1.1
SIK3-208ENST00000472648 SAGE1Q9NXZ1 904 aa8.16□□□□□ -1.1
SIK3-208ENST00000472648 CYP19A1P11511 503 aaPredicted RBP8.15□□□□□ -1.1
SIK3-208ENST00000472648 FXR1P51114 621 aaKnown RBP eCLIP8.15□□□□□ -1.1
SIK3-208ENST00000472648 CTU1Q7Z7A3 348 aaKnown RBP8.15□□□□□ -1.1
SIK3-208ENST00000472648 RTKN2Q8IZC4 609 aa8.15□□□□□ -1.1
SIK3-208ENST00000472648 ZNF408Q9H9D4 720 aa8.15□□□□□ -1.1
SIK3-208ENST00000472648 COL4A5P29400 1685 aa8.14□□□□□ -1.11
SIK3-208ENST00000472648 CENPFP49454 3210 aa8.14□□□□□ -1.11
SIK3-208ENST00000472648 SZT2Q5T011 3432 aa8.14□□□□□ -1.11
SIK3-208ENST00000472648 A0A087WZG4 1122 aa8.14□□□□□ -1.11
SIK3-208ENST00000472648 CANXP27824 592 aaKnown RBP8.14□□□□□ -1.11
SIK3-208ENST00000472648 AMOTQ4VCS5 1084 aa8.14□□□□□ -1.11
SIK3-208ENST00000472648 HPS5Q9UPZ3 1129 aa8.14□□□□□ -1.11
SIK3-208ENST00000472648 SIPA1L3O60292 1781 aaPredicted RBP8.14□□□□□ -1.11
SIK3-208ENST00000472648 MRC1P22897 1456 aa8.13□□□□□ -1.11
SIK3-208ENST00000472648 EPS15P42566 896 aa8.13□□□□□ -1.11
SIK3-208ENST00000472648 SCNN1DP51172 638 aa8.13□□□□□ -1.11
SIK3-208ENST00000472648 SYNE4Q8N205 404 aa8.13□□□□□ -1.11
SIK3-208ENST00000472648 SETDB2Q96T68 719 aa8.13□□□□□ -1.11
SIK3-208ENST00000472648 SLC24A1O60721 1099 aa8.12□□□□□ -1.11
SIK3-208ENST00000472648 TRPA1O75762 1119 aa8.12□□□□□ -1.11
SIK3-208ENST00000472648 NPR1P16066 1061 aa8.12□□□□□ -1.11
SIK3-208ENST00000472648 HUNKP57058 714 aa8.12□□□□□ -1.11
SIK3-208ENST00000472648 EIF4A2Q14240 407 aaKnown RBP8.12□□□□□ -1.11
SIK3-208ENST00000472648 PKN2Q16513 984 aaKnown RBP8.12□□□□□ -1.11
SIK3-208ENST00000472648 C7orf43Q8WVR3 580 aa8.12□□□□□ -1.11
SIK3-208ENST00000472648 ZIC5Q96T25 663 aa8.12□□□□□ -1.11
SIK3-208ENST00000472648 GLIS2Q9BZE0 524 aaPredicted RBP8.12□□□□□ -1.11
SIK3-208ENST00000472648 ZNF330Q9Y3S2 320 aaPredicted RBP8.12□□□□□ -1.11
SIK3-208ENST00000472648 NUP98P52948 1817 aa8.12□□□□□ -1.11
SIK3-208ENST00000472648 COL6A3P12111 3177 aa8.12□□□□□ -1.11
SIK3-208ENST00000472648 EIF5P55010 431 aaKnown RBP8.11□□□□□ -1.11
SIK3-208ENST00000472648 OLFM4Q6UX06 510 aa8.11□□□□□ -1.11
SIK3-208ENST00000472648 NPM2Q86SE8 214 aaKnown RBP8.11□□□□□ -1.11
SIK3-208ENST00000472648 ADARB2Q9NS39 739 aaKnown RBP8.11□□□□□ -1.11
SIK3-208ENST00000472648 RNF186Q9NXI6 227 aa8.11□□□□□ -1.11
SIK3-208ENST00000472648 A0A0C4DFX4 3053 aa8.11□□□□□ -1.11
SIK3-208ENST00000472648 NEUROD1Q13562 356 aa8.1□□□□□ -1.11
SIK3-208ENST00000472648 VSIG10Q8N0Z9 540 aa8.1□□□□□ -1.11
SIK3-208ENST00000472648 SLC17A8Q8NDX2 589 aa8.1□□□□□ -1.11
SIK3-208ENST00000472648 TESK2Q96S53 571 aa8.1□□□□□ -1.11
SIK3-208ENST00000472648 PSMD1Q99460 953 aa8.1□□□□□ -1.11
SIK3-208ENST00000472648 HDAC9Q9UKV0 1011 aa8.1□□□□□ -1.11
SIK3-208ENST00000472648 BRCA2P51587 3418 aa8.1□□□□□ -1.11
SIK3-208ENST00000472648 DDX60Q8IY21 1712 aaKnown RBP8.09□□□□□ -1.11
SIK3-208ENST00000472648 STARD3NLO95772 234 aa8.09□□□□□ -1.11
SIK3-208ENST00000472648 ALDH1B1P30837 517 aa8.09□□□□□ -1.11
SIK3-208ENST00000472648 KIF23Q02241 960 aaPredicted RBP8.09□□□□□ -1.11
SIK3-208ENST00000472648 SLC39A6Q13433 755 aa8.09□□□□□ -1.11
SIK3-208ENST00000472648 RGMBQ6NW40 437 aa8.09□□□□□ -1.11
SIK3-208ENST00000472648 NBPF5PQ86XG9 351 aaPredicted RBP8.09□□□□□ -1.11
SIK3-208ENST00000472648 LARGE2Q8N3Y3 721 aa8.09□□□□□ -1.11
SIK3-208ENST00000472648 CCDC102AQ96A19 550 aa8.09□□□□□ -1.11
SIK3-208ENST00000472648 SIN3AQ96ST3 1273 aa8.09□□□□□ -1.11
SIK3-208ENST00000472648 SLC52A2Q9HAB3 445 aa8.09□□□□□ -1.11
SIK3-208ENST00000472648 GPRC5DQ9NZD1 345 aa8.09□□□□□ -1.11
SIK3-208ENST00000472648 TBC1D2BQ9UPU7 963 aa8.09□□□□□ -1.11
SIK3-208ENST00000472648 HTTP42858 3142 aa8.09□□□□□ -1.11
SIK3-208ENST00000472648 FAM155AB1AL88 458 aaPredicted RBP8.08□□□□□ -1.12
SIK3-208ENST00000472648 ZNF157P51786 506 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms