RNA–Protein interactions for RNA: ENST00000472305.1

SEC16A-209, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 3

Gene SEC16A, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-209ENST00000472305 USP42Q9H9J4 1324 aaKnown RBP16.5■□□□□ 0.23
SEC16A-209ENST00000472305 BCAR3O75815 825 aa16.5■□□□□ 0.23
SEC16A-209ENST00000472305 ZBTB7AO95365 584 aa16.5■□□□□ 0.23
SEC16A-209ENST00000472305 CT47B1P0C2W7 299 aaPredicted RBP16.5■□□□□ 0.23
SEC16A-209ENST00000472305 GYS1P13807 737 aa16.5■□□□□ 0.23
SEC16A-209ENST00000472305 MSL1Q68DK7 614 aa16.5■□□□□ 0.23
SEC16A-209ENST00000472305 ZBTB3Q9H5J0 574 aa16.5■□□□□ 0.23
SEC16A-209ENST00000472305 CHD4Q14839 1912 aa16.5■□□□□ 0.23
SEC16A-209ENST00000472305 FKBP8Q14318 412 aa16.49■□□□□ 0.23
SEC16A-209ENST00000472305 ZPR1O75312 459 aa16.48■□□□□ 0.23
SEC16A-209ENST00000472305 ALDH1L2Q3SY69 923 aa16.48■□□□□ 0.23
SEC16A-209ENST00000472305 NPM2Q86SE8 214 aaKnown RBP16.48■□□□□ 0.23
SEC16A-209ENST00000472305 SMC4Q9NTJ3 1288 aa16.48■□□□□ 0.23
SEC16A-209ENST00000472305 ATF5Q9Y2D1 282 aaPredicted RBP16.48■□□□□ 0.23
SEC16A-209ENST00000472305 MAP3K15Q6ZN16 1313 aa16.47■□□□□ 0.23
SEC16A-209ENST00000472305 FLIIQ13045 1269 aa16.47■□□□□ 0.23
SEC16A-209ENST00000472305 KIF6Q6ZMV9 814 aa16.47■□□□□ 0.23
SEC16A-209ENST00000472305 ZNF428Q96B54 188 aa16.47■□□□□ 0.23
SEC16A-209ENST00000472305 CHMP4AQ9BY43 222 aa16.47■□□□□ 0.23
SEC16A-209ENST00000472305 C4AP0C0L4 1744 aa16.46■□□□□ 0.23
SEC16A-209ENST00000472305 ANKRD13DQ6ZTN6 518 aa16.46■□□□□ 0.23
SEC16A-209ENST00000472305 CASZ1Q86V15 1759 aa16.46■□□□□ 0.22
SEC16A-209ENST00000472305 QSER1Q2KHR3 1735 aa16.45■□□□□ 0.22
SEC16A-209ENST00000472305 TBC1D9BQ66K14 1250 aa16.45■□□□□ 0.22
SEC16A-209ENST00000472305 BICDL1Q6ZP65 573 aa16.45■□□□□ 0.22
SEC16A-209ENST00000472305 NOB1Q9ULX3 412 aaKnown RBP16.45■□□□□ 0.22
SEC16A-209ENST00000472305 ADCY9O60503 1353 aa16.44■□□□□ 0.22
SEC16A-209ENST00000472305 PI4KAP2A4QPH2 592 aa16.44■□□□□ 0.22
SEC16A-209ENST00000472305 ERVV-1B6SEH8 477 aa16.44■□□□□ 0.22
SEC16A-209ENST00000472305 F6X3S4 739 aa16.44■□□□□ 0.22
SEC16A-209ENST00000472305 FKBP5Q13451 457 aaPredicted RBP16.44■□□□□ 0.22
SEC16A-209ENST00000472305 RIC3Q7Z5B4 369 aa16.44■□□□□ 0.22
SEC16A-209ENST00000472305 PI4KAP1Q8N8J0 262 aa16.44■□□□□ 0.22
SEC16A-209ENST00000472305 PLBD2Q8NHP8 589 aa16.44■□□□□ 0.22
SEC16A-209ENST00000472305 SLC16A10Q8TF71 515 aa16.44■□□□□ 0.22
SEC16A-209ENST00000472305 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
SEC16A-209ENST00000472305 TM4SF1P30408 202 aa16.43■□□□□ 0.22
SEC16A-209ENST00000472305 NFIXQ14938 502 aa16.43■□□□□ 0.22
SEC16A-209ENST00000472305 KSR2Q6VAB6 950 aa16.43■□□□□ 0.22
SEC16A-209ENST00000472305 GIGYF2Q6Y7W6 1299 aaKnown RBP16.43■□□□□ 0.22
SEC16A-209ENST00000472305 MTFR1LQ9H019 292 aa16.43■□□□□ 0.22
SEC16A-209ENST00000472305 RCAN3Q9UKA8 241 aa16.43■□□□□ 0.22
SEC16A-209ENST00000472305 MAP3K2Q9Y2U5 619 aa16.43■□□□□ 0.22
SEC16A-209ENST00000472305 GPTP24298 496 aa16.42■□□□□ 0.22
SEC16A-209ENST00000472305 BRPF1P55201 1214 aaPredicted RBP16.42■□□□□ 0.22
SEC16A-209ENST00000472305 DDR1Q08345 913 aa16.42■□□□□ 0.22
SEC16A-209ENST00000472305 NLGN1Q8N2Q7 840 aa16.42■□□□□ 0.22
SEC16A-209ENST00000472305 MYD88Q99836 296 aa16.42■□□□□ 0.22
SEC16A-209ENST00000472305 ATP5J2-PTCD1G3V325 749 aa16.41■□□□□ 0.22
SEC16A-209ENST00000472305 MMP10P09238 476 aa16.41■□□□□ 0.22
SEC16A-209ENST00000472305 PTGER2P43116 358 aa16.41■□□□□ 0.22
SEC16A-209ENST00000472305 TCIRG1Q13488 830 aa16.41■□□□□ 0.22
SEC16A-209ENST00000472305 CLEC4GQ6UXB4 293 aa16.41■□□□□ 0.22
SEC16A-209ENST00000472305 ZNF34Q8IZ26 560 aa16.41■□□□□ 0.22
SEC16A-209ENST00000472305 FRAT1Q92837 279 aaPredicted RBP16.41■□□□□ 0.22
SEC16A-209ENST00000472305 SGIP1Q9BQI5 828 aa16.41■□□□□ 0.22
SEC16A-209ENST00000472305 FAM177BA6PVY3 158 aa16.4■□□□□ 0.22
SEC16A-209ENST00000472305 DDX58O95786 925 aaKnown RBP16.4■□□□□ 0.22
SEC16A-209ENST00000472305 DNAAF4Q8WXU2 420 aa16.4■□□□□ 0.22
SEC16A-209ENST00000472305 METTL22Q9BUU2 404 aaPredicted RBP16.4■□□□□ 0.22
SEC16A-209ENST00000472305 NIP7Q9Y221 180 aaKnown RBP eCLIP16.4■□□□□ 0.22
SEC16A-209ENST00000472305 UBN2Q6ZU65 1347 aa16.4■□□□□ 0.22
SEC16A-209ENST00000472305 SCN7AQ01118 1682 aa16.4■□□□□ 0.22
SEC16A-209ENST00000472305 BCORQ6W2J9 1755 aa16.39■□□□□ 0.21
SEC16A-209ENST00000472305 POLRMTO00411 1230 aaKnown RBP16.39■□□□□ 0.21
SEC16A-209ENST00000472305 IGKV5-2P06315 115 aa16.39■□□□□ 0.21
SEC16A-209ENST00000472305 CCDC24Q8N4L8 307 aa16.39■□□□□ 0.21
SEC16A-209ENST00000472305 ISCA1Q9BUE6 129 aa16.39■□□□□ 0.21
SEC16A-209ENST00000472305 ZNF652Q9Y2D9 606 aa16.39■□□□□ 0.21
SEC16A-209ENST00000472305 RGL2O15211 777 aa16.38■□□□□ 0.21
SEC16A-209ENST00000472305 PLIN1O60240 522 aa16.38■□□□□ 0.21
SEC16A-209ENST00000472305 SUSD4Q5VX71 490 aa16.38■□□□□ 0.21
SEC16A-209ENST00000472305 PTPRCP08575 1304 aa16.38■□□□□ 0.21
SEC16A-209ENST00000472305 ATP10DQ9P241 1426 aa16.37■□□□□ 0.21
SEC16A-209ENST00000472305 SERPINB2P05120 415 aa16.37■□□□□ 0.21
SEC16A-209ENST00000472305 CWF19L2Q2TBE0 894 aaKnown RBP16.37■□□□□ 0.21
SEC16A-209ENST00000472305 HSP90AB3PQ58FF7 597 aa16.37■□□□□ 0.21
SEC16A-209ENST00000472305 SLC4A10Q6U841 1118 aa16.37■□□□□ 0.21
SEC16A-209ENST00000472305 NLRP10Q86W26 655 aa16.37■□□□□ 0.21
SEC16A-209ENST00000472305 JARID2Q92833 1246 aaPredicted RBP16.37■□□□□ 0.21
SEC16A-209ENST00000472305 SETDB2Q96T68 719 aa16.37■□□□□ 0.21
SEC16A-209ENST00000472305 TRIM27P14373 513 aa16.36■□□□□ 0.21
SEC16A-209ENST00000472305 BEND3Q5T5X7 828 aa16.36■□□□□ 0.21
SEC16A-209ENST00000472305 PARP3Q9Y6F1 533 aa16.36■□□□□ 0.21
SEC16A-209ENST00000472305 POLD1P28340 1107 aa16.35■□□□□ 0.21
SEC16A-209ENST00000472305 ZKSCAN2Q63HK3 967 aa16.35■□□□□ 0.21
SEC16A-209ENST00000472305 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
SEC16A-209ENST00000472305 ARHGAP45Q92619 1136 aa16.35■□□□□ 0.21
SEC16A-209ENST00000472305 CLUAP1Q96AJ1 413 aa16.35■□□□□ 0.21
SEC16A-209ENST00000472305 API5Q9BZZ5 524 aaKnown RBP16.35■□□□□ 0.21
SEC16A-209ENST00000472305 KIF16BQ96L93 1317 aa16.35■□□□□ 0.21
SEC16A-209ENST00000472305 NUP98P52948 1817 aa16.35■□□□□ 0.21
SEC16A-209ENST00000472305 ARFGEF2Q9Y6D5 1785 aa16.34■□□□□ 0.21
SEC16A-209ENST00000472305 NEURL1BA8MQ27 555 aa16.34■□□□□ 0.21
SEC16A-209ENST00000472305 NTSR2O95665 410 aa16.34■□□□□ 0.21
SEC16A-209ENST00000472305 TRIM28Q13263 835 aaKnown RBP16.34■□□□□ 0.21
SEC16A-209ENST00000472305 ATF7IPQ6VMQ6 1270 aa16.34■□□□□ 0.21
SEC16A-209ENST00000472305 NUTM1Q86Y26 1132 aa16.34■□□□□ 0.21
SEC16A-209ENST00000472305 CACNA1FO60840 1977 aa16.33■□□□□ 0.21
SEC16A-209ENST00000472305 IPO8O15397 1037 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms