RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 SENP3-EIF4A1A0A087X0R7 540 aa6.76□□□□□ -1.33
PTCD3-209ENST00000472044 MAN1A2O60476 641 aa6.76□□□□□ -1.33
PTCD3-209ENST00000472044 ERCC3P19447 782 aa6.76□□□□□ -1.33
PTCD3-209ENST00000472044 MSX1P28360 303 aa6.76□□□□□ -1.33
PTCD3-209ENST00000472044 NOM1Q5C9Z4 860 aaKnown RBP6.76□□□□□ -1.33
PTCD3-209ENST00000472044 IER5Q5VY09 327 aa6.76□□□□□ -1.33
PTCD3-209ENST00000472044 RGS22Q8NE09 1264 aa6.76□□□□□ -1.33
PTCD3-209ENST00000472044 RHPN1Q8TCX5 695 aa6.76□□□□□ -1.33
PTCD3-209ENST00000472044 IFT43Q96FT9 208 aa6.76□□□□□ -1.33
PTCD3-209ENST00000472044 TRIM47Q96LD4 638 aa6.76□□□□□ -1.33
PTCD3-209ENST00000472044 ZIC5Q96T25 663 aa6.76□□□□□ -1.33
PTCD3-209ENST00000472044 KLK14Q9P0G3 267 aa6.76□□□□□ -1.33
PTCD3-209ENST00000472044 ANKIB1Q9P2G1 1089 aa6.76□□□□□ -1.33
PTCD3-209ENST00000472044 BCS1LQ9Y276 419 aa6.76□□□□□ -1.33
PTCD3-209ENST00000472044 TGFBR3LH3BV60 316 aa6.75□□□□□ -1.33
PTCD3-209ENST00000472044 F11P03951 625 aa6.75□□□□□ -1.33
PTCD3-209ENST00000472044 EIF1AXP47813 144 aaKnown RBP6.75□□□□□ -1.33
PTCD3-209ENST00000472044 FAM26DQ5JW98 314 aa6.75□□□□□ -1.33
PTCD3-209ENST00000472044 ETFBKMTQ8IXQ9 262 aa6.75□□□□□ -1.33
PTCD3-209ENST00000472044 DMGDHQ9UI17 866 aaKnown RBP6.75□□□□□ -1.33
PTCD3-209ENST00000472044 SLC35F4A4IF30 521 aa6.74□□□□□ -1.33
PTCD3-209ENST00000472044 ZBTB39O15060 712 aa6.74□□□□□ -1.33
PTCD3-209ENST00000472044 MARSP56192 900 aaKnown RBP6.74□□□□□ -1.33
PTCD3-209ENST00000472044 LBRQ14739 615 aaKnown RBP6.74□□□□□ -1.33
PTCD3-209ENST00000472044 DNAJC14Q6Y2X3 702 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-209ENST00000472044 SUSD3Q96L08 255 aa6.74□□□□□ -1.33
PTCD3-209ENST00000472044 CITED4Q96RK1 184 aa6.74□□□□□ -1.33
PTCD3-209ENST00000472044 DCTN4Q9UJW0 460 aa6.74□□□□□ -1.33
PTCD3-209ENST00000472044 A0A1W2PNR3 127 aa6.73□□□□□ -1.33
PTCD3-209ENST00000472044 FZD6O60353 706 aa6.73□□□□□ -1.33
PTCD3-209ENST00000472044 PTSQ03393 145 aa6.73□□□□□ -1.33
PTCD3-209ENST00000472044 Q6ZNB5 142 aa6.73□□□□□ -1.33
PTCD3-209ENST00000472044 BICDL1Q6ZP65 573 aa6.73□□□□□ -1.33
PTCD3-209ENST00000472044 NLRP8Q86W28 1048 aa6.73□□□□□ -1.33
PTCD3-209ENST00000472044 RBCK1Q9BYM8 510 aa6.73□□□□□ -1.33
PTCD3-209ENST00000472044 LCE2BO14633 110 aa6.72□□□□□ -1.33
PTCD3-209ENST00000472044 MICAL2O94851 1124 aa6.72□□□□□ -1.33
PTCD3-209ENST00000472044 ARSJQ5FYB0 599 aaPredicted RBP6.72□□□□□ -1.33
PTCD3-209ENST00000472044 SAMD5Q5TGI4 173 aa6.72□□□□□ -1.33
PTCD3-209ENST00000472044 TREML1Q86YW5 311 aa6.72□□□□□ -1.33
PTCD3-209ENST00000472044 ZNF280CQ8ND82 737 aa6.72□□□□□ -1.33
PTCD3-209ENST00000472044 KLRG1Q96E93 195 aa6.72□□□□□ -1.33
PTCD3-209ENST00000472044 ASB16Q96NS5 453 aa6.72□□□□□ -1.33
PTCD3-209ENST00000472044 GMPR2Q9P2T1 348 aaKnown RBP6.72□□□□□ -1.33
PTCD3-209ENST00000472044 SOBPA7XYQ1 873 aa6.71□□□□□ -1.34
PTCD3-209ENST00000472044 NDUFB5O43674 189 aa6.71□□□□□ -1.34
PTCD3-209ENST00000472044 MZF1P28698 734 aaPredicted RBP6.71□□□□□ -1.34
PTCD3-209ENST00000472044 ZAP70P43403 619 aa6.71□□□□□ -1.34
PTCD3-209ENST00000472044 PGBD3Q8N328 593 aa6.71□□□□□ -1.34
PTCD3-209ENST00000472044 GMCL1Q96IK5 515 aa6.71□□□□□ -1.34
PTCD3-209ENST00000472044 NEUROD4Q9HD90 331 aa6.71□□□□□ -1.34
PTCD3-209ENST00000472044 FAM13BQ9NYF5 915 aa6.71□□□□□ -1.34
PTCD3-209ENST00000472044 OPLAHO14841 1288 aa6.7□□□□□ -1.34
PTCD3-209ENST00000472044 MAPK1P28482 360 aa6.7□□□□□ -1.34
PTCD3-209ENST00000472044 EFHC2Q5JST6 749 aa6.7□□□□□ -1.34
PTCD3-209ENST00000472044 BTLAQ7Z6A9 289 aa6.7□□□□□ -1.34
PTCD3-209ENST00000472044 ZSCAN29Q8IWY8 852 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-209ENST00000472044 RGL4Q8IZJ4 473 aa6.7□□□□□ -1.34
PTCD3-209ENST00000472044 HSH2DQ96JZ2 352 aa6.7□□□□□ -1.34
PTCD3-209ENST00000472044 GAS2L1Q99501 681 aaPredicted RBP6.7□□□□□ -1.34
PTCD3-209ENST00000472044 RUBCNLQ9H714 662 aa6.7□□□□□ -1.34
PTCD3-209ENST00000472044 GPAMQ9HCL2 828 aa6.7□□□□□ -1.34
PTCD3-209ENST00000472044 C11orf16Q9NQ32 467 aa6.7□□□□□ -1.34
PTCD3-209ENST00000472044 CCDC87Q9NVE4 849 aa6.7□□□□□ -1.34
PTCD3-209ENST00000472044 BRPF3Q9ULD4 1205 aa6.7□□□□□ -1.34
PTCD3-209ENST00000472044 AMOTL2Q9Y2J4 779 aa6.7□□□□□ -1.34
PTCD3-209ENST00000472044 H7C1W4 665 aa6.69□□□□□ -1.34
PTCD3-209ENST00000472044 INPP5BP32019 993 aa6.69□□□□□ -1.34
PTCD3-209ENST00000472044 USP5P45974 858 aa6.69□□□□□ -1.34
PTCD3-209ENST00000472044 IDH3AP50213 366 aa6.69□□□□□ -1.34
PTCD3-209ENST00000472044 COL19A1Q14993 1142 aa6.69□□□□□ -1.34
PTCD3-209ENST00000472044 LRRC69Q6ZNQ3 347 aa6.69□□□□□ -1.34
PTCD3-209ENST00000472044 ATCAYQ86WG3 371 aa6.69□□□□□ -1.34
PTCD3-209ENST00000472044 CCDC155Q8N6L0 562 aa6.69□□□□□ -1.34
PTCD3-209ENST00000472044 FAM129BQ96TA1 746 aa6.69□□□□□ -1.34
PTCD3-209ENST00000472044 IGHA2P01877 340 aa6.68□□□□□ -1.34
PTCD3-209ENST00000472044 PDGFAP04085 211 aa6.68□□□□□ -1.34
PTCD3-209ENST00000472044 RPLP1P05386 114 aaKnown RBP6.68□□□□□ -1.34
PTCD3-209ENST00000472044 THBS1P07996 1170 aa6.68□□□□□ -1.34
PTCD3-209ENST00000472044 SNRPBP14678 240 aaKnown RBP6.68□□□□□ -1.34
PTCD3-209ENST00000472044 ARSDP51689 593 aa6.68□□□□□ -1.34
PTCD3-209ENST00000472044 TYRO3Q06418 890 aa6.68□□□□□ -1.34
PTCD3-209ENST00000472044 AAMPQ13685 434 aa6.68□□□□□ -1.34
PTCD3-209ENST00000472044 UBAP2LQ14157 1087 aaKnown RBP6.68□□□□□ -1.34
PTCD3-209ENST00000472044 FIGNL1Q6PIW4 674 aa6.68□□□□□ -1.34
PTCD3-209ENST00000472044 TRIM22Q8IYM9 498 aa6.68□□□□□ -1.34
PTCD3-209ENST00000472044 GJD3Q8N144 294 aa6.68□□□□□ -1.34
PTCD3-209ENST00000472044 ZCCHC2Q9C0B9 1178 aaKnown RBP6.68□□□□□ -1.34
PTCD3-209ENST00000472044 GJA3Q9Y6H8 435 aa6.68□□□□□ -1.34
PTCD3-209ENST00000472044 ANKRD33BA6NCL7 494 aa6.67□□□□□ -1.34
PTCD3-209ENST00000472044 FAM157BP0CG42 384 aa6.67□□□□□ -1.34
PTCD3-209ENST00000472044 KCNQ4P56696 695 aa6.67□□□□□ -1.34
PTCD3-209ENST00000472044 PDE3BQ13370 1112 aa6.67□□□□□ -1.34
PTCD3-209ENST00000472044 TMC7Q7Z402 723 aa6.67□□□□□ -1.34
PTCD3-209ENST00000472044 NPAS4Q8IUM7 802 aa6.67□□□□□ -1.34
PTCD3-209ENST00000472044 PIK3R5Q8WYR1 880 aa6.67□□□□□ -1.34
PTCD3-209ENST00000472044 EDEM1Q92611 657 aa6.67□□□□□ -1.34
PTCD3-209ENST00000472044 ALKBH8Q96BT7 664 aaKnown RBP6.67□□□□□ -1.34
PTCD3-209ENST00000472044 DMRTB1Q96MA1 342 aa6.67□□□□□ -1.34
PTCD3-209ENST00000472044 POLIQ9UNA4 740 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms