RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 RTF1Q92541 710 aaKnown RBP12.51□□□□□ -0.41
GGPS1-204ENST00000471812 FMNL2Q96PY5 1086 aa12.51□□□□□ -0.41
GGPS1-204ENST00000471812 ZNF330Q9Y3S2 320 aaPredicted RBP12.51□□□□□ -0.41
GGPS1-204ENST00000471812 CARMIL3Q8ND23 1372 aa12.51□□□□□ -0.41
GGPS1-204ENST00000471812 POLRMTO00411 1230 aaKnown RBP12.5□□□□□ -0.41
GGPS1-204ENST00000471812 RIPK4P57078 832 aa12.5□□□□□ -0.41
GGPS1-204ENST00000471812 NFIXQ14938 502 aa12.5□□□□□ -0.41
GGPS1-204ENST00000471812 TAF7Q15545 349 aaPredicted RBP12.5□□□□□ -0.41
GGPS1-204ENST00000471812 GPR162Q16538 588 aa12.5□□□□□ -0.41
GGPS1-204ENST00000471812 CCDC24Q8N4L8 307 aa12.5□□□□□ -0.41
GGPS1-204ENST00000471812 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
GGPS1-204ENST00000471812 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
GGPS1-204ENST00000471812 MAPK8IP3Q9UPT6 1336 aa12.49□□□□□ -0.41
GGPS1-204ENST00000471812 A0A0G2JLW4 131 aa12.49□□□□□ -0.41
GGPS1-204ENST00000471812 HTATSF1O43719 755 aaKnown RBP12.49□□□□□ -0.41
GGPS1-204ENST00000471812 YY1P25490 414 aa12.49□□□□□ -0.41
GGPS1-204ENST00000471812 TM4SF1P30408 202 aa12.49□□□□□ -0.41
GGPS1-204ENST00000471812 GSE1Q14687 1217 aa12.49□□□□□ -0.41
GGPS1-204ENST00000471812 KRT24Q2M2I5 525 aa12.49□□□□□ -0.41
GGPS1-204ENST00000471812 NARFQ9UHQ1 456 aa12.49□□□□□ -0.41
GGPS1-204ENST00000471812 CD2APQ9Y5K6 639 aa12.49□□□□□ -0.41
GGPS1-204ENST00000471812 COL11A2P13942 1736 aaPredicted RBP12.48□□□□□ -0.41
GGPS1-204ENST00000471812 EIF4A1P60842 406 aaKnown RBP12.48□□□□□ -0.41
GGPS1-204ENST00000471812 BICDL1Q6ZP65 573 aa12.48□□□□□ -0.41
GGPS1-204ENST00000471812 NLGN1Q8N2Q7 840 aa12.48□□□□□ -0.41
GGPS1-204ENST00000471812 CAMTA2O94983 1202 aa12.47□□□□□ -0.41
GGPS1-204ENST00000471812 DPEP1P16444 411 aa12.47□□□□□ -0.41
GGPS1-204ENST00000471812 KCNA3P22001 575 aa12.47□□□□□ -0.41
GGPS1-204ENST00000471812 CHRNA5P30532 468 aa12.47□□□□□ -0.41
GGPS1-204ENST00000471812 TBC1D9BQ66K14 1250 aa12.47□□□□□ -0.41
GGPS1-204ENST00000471812 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.47□□□□□ -0.41
GGPS1-204ENST00000471812 CACNA1SQ13698 1873 aa12.46□□□□□ -0.41
GGPS1-204ENST00000471812 NUP98P52948 1817 aa12.46□□□□□ -0.41
GGPS1-204ENST00000471812 STARD3NLO95772 234 aa12.46□□□□□ -0.41
GGPS1-204ENST00000471812 ANXA1P04083 346 aa12.46□□□□□ -0.41
GGPS1-204ENST00000471812 DCAF8Q5TAQ9 597 aa12.46□□□□□ -0.41
GGPS1-204ENST00000471812 PAXIP1Q6ZW49 1069 aaPredicted RBP12.46□□□□□ -0.41
GGPS1-204ENST00000471812 RUNDC1Q96C34 613 aa12.46□□□□□ -0.41
GGPS1-204ENST00000471812 PARP3Q9Y6F1 533 aa12.46□□□□□ -0.41
GGPS1-204ENST00000471812 DLEC1Q9Y238 1755 aa12.46□□□□□ -0.42
GGPS1-204ENST00000471812 ZPR1O75312 459 aa12.45□□□□□ -0.42
GGPS1-204ENST00000471812 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
GGPS1-204ENST00000471812 SNRPA1P09661 255 aaKnown RBP12.45□□□□□ -0.42
GGPS1-204ENST00000471812 WDR43Q15061 677 aaKnown RBP eCLIP12.45□□□□□ -0.42
GGPS1-204ENST00000471812 PROSER3Q2NL68 480 aa12.45□□□□□ -0.42
GGPS1-204ENST00000471812 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
GGPS1-204ENST00000471812 ARFGEF1Q9Y6D6 1849 aa12.45□□□□□ -0.42
GGPS1-204ENST00000471812 APAF1O14727 1248 aa12.44□□□□□ -0.42
GGPS1-204ENST00000471812 HMGB2P26583 209 aaKnown RBP12.44□□□□□ -0.42
GGPS1-204ENST00000471812 IL6STP40189 918 aaPredicted RBP12.44□□□□□ -0.42
GGPS1-204ENST00000471812 NGEFQ8N5V2 710 aa12.44□□□□□ -0.42
GGPS1-204ENST00000471812 TSPYL4Q9UJ04 414 aa12.44□□□□□ -0.42
GGPS1-204ENST00000471812 TNRC6CQ9HCJ0 1690 aaKnown RBP12.43□□□□□ -0.42
GGPS1-204ENST00000471812 SERPINB2P05120 415 aa12.43□□□□□ -0.42
GGPS1-204ENST00000471812 NEFMP07197 916 aa12.43□□□□□ -0.42
GGPS1-204ENST00000471812 HLFQ16534 295 aa12.43□□□□□ -0.42
GGPS1-204ENST00000471812 TTLL7Q6ZT98 887 aa12.43□□□□□ -0.42
GGPS1-204ENST00000471812 DZIP3Q86Y13 1208 aaKnown RBP12.43□□□□□ -0.42
GGPS1-204ENST00000471812 NECTIN2Q92692 538 aa12.43□□□□□ -0.42
GGPS1-204ENST00000471812 TEX13AQ9BXU3 409 aaPredicted RBP12.43□□□□□ -0.42
GGPS1-204ENST00000471812 LRP10Q7Z4F1 713 aa12.42□□□□□ -0.42
GGPS1-204ENST00000471812 ZNF784Q8NCA9 323 aaPredicted RBP12.42□□□□□ -0.42
GGPS1-204ENST00000471812 LAS1LQ9Y4W2 734 aaKnown RBP12.42□□□□□ -0.42
GGPS1-204ENST00000471812 SBF1O95248 1867 aa12.41□□□□□ -0.42
GGPS1-204ENST00000471812 MYL6BP14649 208 aa12.41□□□□□ -0.42
GGPS1-204ENST00000471812 PDIA6Q15084 440 aa12.41□□□□□ -0.42
GGPS1-204ENST00000471812 CCDC88AQ3V6T2 1871 aa12.41□□□□□ -0.42
GGPS1-204ENST00000471812 SLC51AQ86UW1 340 aa12.41□□□□□ -0.42
GGPS1-204ENST00000471812 CFAP44Q96MT7 982 aa12.41□□□□□ -0.42
GGPS1-204ENST00000471812 BCS1LQ9Y276 419 aa12.41□□□□□ -0.42
GGPS1-204ENST00000471812 SLX4Q8IY92 1834 aa12.4□□□□□ -0.42
GGPS1-204ENST00000471812 CHL1O00533 1208 aa12.4□□□□□ -0.42
GGPS1-204ENST00000471812 EIF2S2P20042 333 aaKnown RBP12.4□□□□□ -0.42
GGPS1-204ENST00000471812 PRR5LQ6MZQ0 368 aa12.4□□□□□ -0.42
GGPS1-204ENST00000471812 PNISRQ8TF01 805 aaKnown RBP12.4□□□□□ -0.42
GGPS1-204ENST00000471812 ZNF428Q96B54 188 aa12.4□□□□□ -0.42
GGPS1-204ENST00000471812 PNNQ9H307 717 aaKnown RBP12.4□□□□□ -0.42
GGPS1-204ENST00000471812 A0A087WZG4 1122 aa12.39□□□□□ -0.43
GGPS1-204ENST00000471812 FAM177BA6PVY3 158 aa12.39□□□□□ -0.43
GGPS1-204ENST00000471812 TGFB2P61812 414 aa12.39□□□□□ -0.43
GGPS1-204ENST00000471812 HS6ST3Q8IZP7 471 aa12.39□□□□□ -0.43
GGPS1-204ENST00000471812 PRELPP51888 382 aa12.38□□□□□ -0.43
GGPS1-204ENST00000471812 FAM212AQ96EL1 285 aa12.38□□□□□ -0.43
GGPS1-204ENST00000471812 ZBTB3Q9H5J0 574 aa12.38□□□□□ -0.43
GGPS1-204ENST00000471812 MRS2Q9HD23 443 aa12.38□□□□□ -0.43
GGPS1-204ENST00000471812 MBIPQ9NS73 344 aa12.38□□□□□ -0.43
GGPS1-204ENST00000471812 ANKRD36CQ5JPF3 1778 aa12.38□□□□□ -0.43
GGPS1-204ENST00000471812 ZNF853P0CG23 659 aa12.37□□□□□ -0.43
GGPS1-204ENST00000471812 ADCY9O60503 1353 aa12.37□□□□□ -0.43
GGPS1-204ENST00000471812 ABCC12Q96J65 1359 aa12.37□□□□□ -0.43
GGPS1-204ENST00000471812 UBN2Q6ZU65 1347 aa12.37□□□□□ -0.43
GGPS1-204ENST00000471812 ANP32CO43423 234 aa12.36□□□□□ -0.43
GGPS1-204ENST00000471812 GPTP24298 496 aa12.36□□□□□ -0.43
GGPS1-204ENST00000471812 RASSF7Q02833 373 aa12.36□□□□□ -0.43
GGPS1-204ENST00000471812 C2CD5Q86YS7 1000 aa12.36□□□□□ -0.43
GGPS1-204ENST00000471812 SPRYD3Q8NCJ5 442 aa12.36□□□□□ -0.43
GGPS1-204ENST00000471812 ATP10DQ9P241 1426 aa12.36□□□□□ -0.43
GGPS1-204ENST00000471812 TAF1P21675 1872 aa12.36□□□□□ -0.43
GGPS1-204ENST00000471812 LAMB2P55268 1798 aa12.35□□□□□ -0.43
GGPS1-204ENST00000471812 ARFGEF2Q9Y6D5 1785 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms