RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 LMNB1P20700 586 aa24.85■■□□□ 1.57
COMMD1-207ENST00000471704 CCDC146Q8IYE0 955 aa24.85■■□□□ 1.57
COMMD1-207ENST00000471704 CNBD1Q8NA66 436 aa24.85■■□□□ 1.57
COMMD1-207ENST00000471704 KDM2BQ8NHM5 1336 aa24.85■■□□□ 1.57
COMMD1-207ENST00000471704 NFKBIEO00221 500 aa24.84■■□□□ 1.57
COMMD1-207ENST00000471704 TMPOP42166 694 aaKnown RBP24.84■■□□□ 1.57
COMMD1-207ENST00000471704 PNISRQ8TF01 805 aaKnown RBP24.84■■□□□ 1.57
COMMD1-207ENST00000471704 RIPK4P57078 832 aa24.83■■□□□ 1.57
COMMD1-207ENST00000471704 EIF4A1P60842 406 aaKnown RBP24.83■■□□□ 1.57
COMMD1-207ENST00000471704 ZNF622Q969S3 477 aaKnown RBP eCLIP24.83■■□□□ 1.57
COMMD1-207ENST00000471704 FER1L6Q2WGJ9 1857 aa24.82■■□□□ 1.56
COMMD1-207ENST00000471704 ZNF652Q9Y2D9 606 aa24.82■■□□□ 1.56
COMMD1-207ENST00000471704 TNRC6CQ9HCJ0 1690 aaKnown RBP24.81■■□□□ 1.56
COMMD1-207ENST00000471704 SRGNP10124 158 aa24.81■■□□□ 1.56
COMMD1-207ENST00000471704 ST5P78524 1137 aa24.81■■□□□ 1.56
COMMD1-207ENST00000471704 RBM46Q8TBY0 533 aaKnown RBP24.81■■□□□ 1.56
COMMD1-207ENST00000471704 ADAMTS8Q9UP79 889 aa24.81■■□□□ 1.56
COMMD1-207ENST00000471704 RRP7AQ9Y3A4 280 aaKnown RBP24.81■■□□□ 1.56
COMMD1-207ENST00000471704 SLX4Q8IY92 1834 aa24.81■■□□□ 1.56
COMMD1-207ENST00000471704 STYK1Q6J9G0 422 aa24.8■■□□□ 1.56
COMMD1-207ENST00000471704 NUP98P52948 1817 aa24.79■■□□□ 1.56
COMMD1-207ENST00000471704 NBPF5PQ86XG9 351 aaPredicted RBP24.79■■□□□ 1.56
COMMD1-207ENST00000471704 RRAGCQ9HB90 399 aa24.79■■□□□ 1.56
COMMD1-207ENST00000471704 ARFGEF2Q9Y6D5 1785 aa24.79■■□□□ 1.56
COMMD1-207ENST00000471704 CACNA1SQ13698 1873 aa24.79■■□□□ 1.56
COMMD1-207ENST00000471704 DICER1Q9UPY3 1922 aaKnown RBP24.78■■□□□ 1.56
COMMD1-207ENST00000471704 KLRG2A4D1S0 409 aaPredicted RBP24.78■■□□□ 1.56
COMMD1-207ENST00000471704 C21orf2O43822 256 aa24.78■■□□□ 1.56
COMMD1-207ENST00000471704 WDR43Q15061 677 aaKnown RBP eCLIP24.78■■□□□ 1.56
COMMD1-207ENST00000471704 CNKSR1Q969H4 720 aa24.78■■□□□ 1.56
COMMD1-207ENST00000471704 RUNDC1Q96C34 613 aa24.78■■□□□ 1.56
COMMD1-207ENST00000471704 NPHP1O15259 732 aa24.77■■□□□ 1.56
COMMD1-207ENST00000471704 APLP1P51693 650 aa24.77■■□□□ 1.56
COMMD1-207ENST00000471704 HLFQ16534 295 aa24.77■■□□□ 1.56
COMMD1-207ENST00000471704 MASTLQ96GX5 879 aa24.77■■□□□ 1.56
COMMD1-207ENST00000471704 TIAM2Q8IVF5 1701 aa24.77■■□□□ 1.56
COMMD1-207ENST00000471704 GLTPD2A6NH11 291 aa24.76■■□□□ 1.55
COMMD1-207ENST00000471704 TRIM35Q9UPQ4 493 aa24.76■■□□□ 1.55
COMMD1-207ENST00000471704 NIP7Q9Y221 180 aaKnown RBP eCLIP24.76■■□□□ 1.55
COMMD1-207ENST00000471704 NEUROD2Q15784 382 aa24.75■■□□□ 1.55
COMMD1-207ENST00000471704 PRPF40BQ6NWY9 871 aaKnown RBP24.75■■□□□ 1.55
COMMD1-207ENST00000471704 TPTE2Q6XPS3 522 aa24.75■■□□□ 1.55
COMMD1-207ENST00000471704 C16orf71Q8IYS4 520 aaPredicted RBP24.75■■□□□ 1.55
COMMD1-207ENST00000471704 TSPYL4Q9UJ04 414 aa24.75■■□□□ 1.55
COMMD1-207ENST00000471704 LTBP3Q9NS15 1303 aa24.75■■□□□ 1.55
COMMD1-207ENST00000471704 FSTL1Q12841 308 aa24.74■■□□□ 1.55
COMMD1-207ENST00000471704 ZNF219Q9P2Y4 722 aaPredicted RBP24.74■■□□□ 1.55
COMMD1-207ENST00000471704 ERVV-1B6SEH8 477 aa24.73■■□□□ 1.55
COMMD1-207ENST00000471704 LMOD3Q0VAK6 560 aa24.73■■□□□ 1.55
COMMD1-207ENST00000471704 DNAJC5GQ8N7S2 189 aa24.73■■□□□ 1.55
COMMD1-207ENST00000471704 C7orf43Q8WVR3 580 aa24.73■■□□□ 1.55
COMMD1-207ENST00000471704 CCDC184Q52MB2 194 aa24.72■■□□□ 1.55
COMMD1-207ENST00000471704 NPR1P16066 1061 aa24.71■■□□□ 1.55
COMMD1-207ENST00000471704 MAP3K15Q6ZN16 1313 aa24.7■■□□□ 1.54
COMMD1-207ENST00000471704 VEGFAP15692 232 aaPredicted RBP24.7■■□□□ 1.54
COMMD1-207ENST00000471704 SOGA3Q5TF21 947 aa24.7■■□□□ 1.54
COMMD1-207ENST00000471704 TTLL7Q6ZT98 887 aa24.7■■□□□ 1.54
COMMD1-207ENST00000471704 TAOK3Q9H2K8 898 aa24.7■■□□□ 1.54
COMMD1-207ENST00000471704 BABAM1Q9NWV8 329 aa24.7■■□□□ 1.54
COMMD1-207ENST00000471704 ZNF316A6NFI3 1004 aaPredicted RBP24.69■■□□□ 1.54
COMMD1-207ENST00000471704 NGEFQ8N5V2 710 aa24.69■■□□□ 1.54
COMMD1-207ENST00000471704 WDR90Q96KV7 1748 aa24.69■■□□□ 1.54
COMMD1-207ENST00000471704 ERBB4Q15303 1308 aa24.68■■□□□ 1.54
COMMD1-207ENST00000471704 POTECB2RU33 542 aa24.68■■□□□ 1.54
COMMD1-207ENST00000471704 ERFEQ4G0M1 354 aa24.68■■□□□ 1.54
COMMD1-207ENST00000471704 LRP10Q7Z4F1 713 aa24.68■■□□□ 1.54
COMMD1-207ENST00000471704 FAM177BA6PVY3 158 aa24.67■■□□□ 1.54
COMMD1-207ENST00000471704 MYL6BP14649 208 aa24.67■■□□□ 1.54
COMMD1-207ENST00000471704 ANKRD36CQ5JPF3 1778 aa24.67■■□□□ 1.54
COMMD1-207ENST00000471704 CHL1O00533 1208 aa24.66■■□□□ 1.54
COMMD1-207ENST00000471704 PDIA6Q15084 440 aa24.66■■□□□ 1.54
COMMD1-207ENST00000471704 KRT24Q2M2I5 525 aa24.66■■□□□ 1.54
COMMD1-207ENST00000471704 DPY19L2Q6NUT2 758 aa24.66■■□□□ 1.54
COMMD1-207ENST00000471704 KIF6Q6ZMV9 814 aa24.66■■□□□ 1.54
COMMD1-207ENST00000471704 SMC1BQ8NDV3 1235 aa24.66■■□□□ 1.54
COMMD1-207ENST00000471704 NYXQ9GZU5 481 aa24.65■■□□□ 1.54
COMMD1-207ENST00000471704 PROSER3Q2NL68 480 aa24.64■■□□□ 1.54
COMMD1-207ENST00000471704 CRY2Q49AN0 593 aa24.64■■□□□ 1.54
COMMD1-207ENST00000471704 ZNF34Q8IZ26 560 aa24.64■■□□□ 1.54
COMMD1-207ENST00000471704 APAF1O14727 1248 aa24.63■■□□□ 1.53
COMMD1-207ENST00000471704 GTF2E1P29083 439 aaPredicted RBP24.63■■□□□ 1.53
COMMD1-207ENST00000471704 CCDC93Q567U6 631 aa24.63■■□□□ 1.53
COMMD1-207ENST00000471704 ABCC12Q96J65 1359 aa24.63■■□□□ 1.53
COMMD1-207ENST00000471704 IBTKQ9P2D0 1353 aaPredicted RBP24.63■■□□□ 1.53
COMMD1-207ENST00000471704 UBN2Q6ZU65 1347 aa24.62■■□□□ 1.53
COMMD1-207ENST00000471704 ANXA1P04083 346 aa24.62■■□□□ 1.53
COMMD1-207ENST00000471704 EIF2S2P20042 333 aaKnown RBP24.62■■□□□ 1.53
COMMD1-207ENST00000471704 ALDH1B1P30837 517 aa24.62■■□□□ 1.53
COMMD1-207ENST00000471704 NUTM1Q86Y26 1132 aa24.62■■□□□ 1.53
COMMD1-207ENST00000471704 ZBTB3Q9H5J0 574 aa24.62■■□□□ 1.53
COMMD1-207ENST00000471704 LAS1LQ9Y4W2 734 aaKnown RBP24.62■■□□□ 1.53
COMMD1-207ENST00000471704 RIC1Q4ADV7 1423 aa24.61■■□□□ 1.53
COMMD1-207ENST00000471704 OLFM4Q6UX06 510 aa24.61■■□□□ 1.53
COMMD1-207ENST00000471704 GIGYF2Q6Y7W6 1299 aaKnown RBP24.61■■□□□ 1.53
COMMD1-207ENST00000471704 GPTP24298 496 aa24.6■■□□□ 1.53
COMMD1-207ENST00000471704 HTRA3P83110 453 aa24.6■■□□□ 1.53
COMMD1-207ENST00000471704 FKBP4Q02790 459 aaKnown RBP eCLIP24.6■■□□□ 1.53
COMMD1-207ENST00000471704 SUSD4Q5VX71 490 aa24.6■■□□□ 1.53
COMMD1-207ENST00000471704 HOXA10P31260 410 aaPredicted RBP24.59■■□□□ 1.53
COMMD1-207ENST00000471704 RTKN2Q8IZC4 609 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms