RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 SRGNP10124 158 aa12.97□□□□□ -0.33
RPRD1B-204ENST00000471511 LRP10Q7Z4F1 713 aa12.97□□□□□ -0.33
RPRD1B-204ENST00000471511 CNBD1Q8NA66 436 aa12.97□□□□□ -0.33
RPRD1B-204ENST00000471511 C7orf43Q8WVR3 580 aa12.97□□□□□ -0.33
RPRD1B-204ENST00000471511 KLRG2A4D1S0 409 aaPredicted RBP12.96□□□□□ -0.33
RPRD1B-204ENST00000471511 PDE6BP35913 854 aa12.96□□□□□ -0.33
RPRD1B-204ENST00000471511 CLEC4GQ6UXB4 293 aa12.96□□□□□ -0.33
RPRD1B-204ENST00000471511 DNAJC5GQ8N7S2 189 aa12.96□□□□□ -0.33
RPRD1B-204ENST00000471511 RRP7AQ9Y3A4 280 aaKnown RBP12.96□□□□□ -0.33
RPRD1B-204ENST00000471511 KDM3BQ7LBC6 1761 aa12.96□□□□□ -0.34
RPRD1B-204ENST00000471511 SLX4Q8IY92 1834 aa12.95□□□□□ -0.34
RPRD1B-204ENST00000471511 LMNB1P20700 586 aa12.95□□□□□ -0.34
RPRD1B-204ENST00000471511 RIPK4P57078 832 aa12.95□□□□□ -0.34
RPRD1B-204ENST00000471511 PDIA6Q15084 440 aa12.95□□□□□ -0.34
RPRD1B-204ENST00000471511 RALBP1Q15311 655 aa12.95□□□□□ -0.34
RPRD1B-204ENST00000471511 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
RPRD1B-204ENST00000471511 PROSER3Q2NL68 480 aa12.95□□□□□ -0.34
RPRD1B-204ENST00000471511 CCDC146Q8IYE0 955 aa12.95□□□□□ -0.34
RPRD1B-204ENST00000471511 NIP7Q9Y221 180 aaKnown RBP eCLIP12.95□□□□□ -0.34
RPRD1B-204ENST00000471511 ANXA1P04083 346 aa12.94□□□□□ -0.34
RPRD1B-204ENST00000471511 TMPOP42166 694 aaKnown RBP12.94□□□□□ -0.34
RPRD1B-204ENST00000471511 STYK1Q6J9G0 422 aa12.94□□□□□ -0.34
RPRD1B-204ENST00000471511 PRPF40BQ6NWY9 871 aaKnown RBP12.94□□□□□ -0.34
RPRD1B-204ENST00000471511 NBPF5PQ86XG9 351 aaPredicted RBP12.94□□□□□ -0.34
RPRD1B-204ENST00000471511 GLTPD2A6NH11 291 aa12.93□□□□□ -0.34
RPRD1B-204ENST00000471511 MYL6BP14649 208 aa12.93□□□□□ -0.34
RPRD1B-204ENST00000471511 C3orf67Q6ZVT6 689 aa12.93□□□□□ -0.34
RPRD1B-204ENST00000471511 NUTM1Q86Y26 1132 aa12.93□□□□□ -0.34
RPRD1B-204ENST00000471511 RBM46Q8TBY0 533 aaKnown RBP12.93□□□□□ -0.34
RPRD1B-204ENST00000471511 MASTLQ96GX5 879 aa12.93□□□□□ -0.34
RPRD1B-204ENST00000471511 TRIM35Q9UPQ4 493 aa12.93□□□□□ -0.34
RPRD1B-204ENST00000471511 ABCC12Q96J65 1359 aa12.93□□□□□ -0.34
RPRD1B-204ENST00000471511 UBN2Q6ZU65 1347 aa12.92□□□□□ -0.34
RPRD1B-204ENST00000471511 ST5P78524 1137 aa12.92□□□□□ -0.34
RPRD1B-204ENST00000471511 SUSD4Q5VX71 490 aa12.92□□□□□ -0.34
RPRD1B-204ENST00000471511 PNISRQ8TF01 805 aaKnown RBP12.92□□□□□ -0.34
RPRD1B-204ENST00000471511 ZBTB3Q9H5J0 574 aa12.92□□□□□ -0.34
RPRD1B-204ENST00000471511 MAP3K15Q6ZN16 1313 aa12.91□□□□□ -0.34
RPRD1B-204ENST00000471511 MAPK8IP3Q9UPT6 1336 aa12.91□□□□□ -0.34
RPRD1B-204ENST00000471511 GPTP24298 496 aa12.91□□□□□ -0.34
RPRD1B-204ENST00000471511 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
RPRD1B-204ENST00000471511 ERFEQ4G0M1 354 aa12.91□□□□□ -0.34
RPRD1B-204ENST00000471511 NPM2Q86SE8 214 aaKnown RBP12.91□□□□□ -0.34
RPRD1B-204ENST00000471511 ZNF34Q8IZ26 560 aa12.91□□□□□ -0.34
RPRD1B-204ENST00000471511 CNKSR1Q969H4 720 aa12.91□□□□□ -0.34
RPRD1B-204ENST00000471511 TSPYL4Q9UJ04 414 aa12.91□□□□□ -0.34
RPRD1B-204ENST00000471511 ADAMTS8Q9UP79 889 aa12.91□□□□□ -0.34
RPRD1B-204ENST00000471511 PDZRN3Q9UPQ7 1066 aa12.91□□□□□ -0.34
RPRD1B-204ENST00000471511 TNRC6CQ9HCJ0 1690 aaKnown RBP12.91□□□□□ -0.34
RPRD1B-204ENST00000471511 FER1L6Q2WGJ9 1857 aa12.91□□□□□ -0.34
RPRD1B-204ENST00000471511 CCDC88AQ3V6T2 1871 aa12.91□□□□□ -0.34
RPRD1B-204ENST00000471511 KDM2BQ8NHM5 1336 aa12.9□□□□□ -0.34
RPRD1B-204ENST00000471511 MYBBP1AQ9BQG0 1328 aaKnown RBP12.9□□□□□ -0.34
RPRD1B-204ENST00000471511 LAMB4A4D0S4 1761 aa12.9□□□□□ -0.34
RPRD1B-204ENST00000471511 ERVV-1B6SEH8 477 aa12.9□□□□□ -0.34
RPRD1B-204ENST00000471511 RGL2O15211 777 aa12.9□□□□□ -0.34
RPRD1B-204ENST00000471511 POTEIP0CG38 1075 aa12.9□□□□□ -0.34
RPRD1B-204ENST00000471511 POTEJP0CG39 1038 aa12.9□□□□□ -0.34
RPRD1B-204ENST00000471511 EIF2S2P20042 333 aaKnown RBP12.9□□□□□ -0.34
RPRD1B-204ENST00000471511 TPTE2Q6XPS3 522 aa12.9□□□□□ -0.34
RPRD1B-204ENST00000471511 NECTIN2Q92692 538 aa12.9□□□□□ -0.34
RPRD1B-204ENST00000471511 ZNF652Q9Y2D9 606 aa12.9□□□□□ -0.34
RPRD1B-204ENST00000471511 SNED1Q8TER0 1413 aa12.89□□□□□ -0.35
RPRD1B-204ENST00000471511 NPHP1O15259 732 aa12.89□□□□□ -0.35
RPRD1B-204ENST00000471511 DDNO94850 711 aaPredicted RBP12.89□□□□□ -0.35
RPRD1B-204ENST00000471511 NEFMP07197 916 aa12.89□□□□□ -0.35
RPRD1B-204ENST00000471511 NPR1P16066 1061 aa12.89□□□□□ -0.35
RPRD1B-204ENST00000471511 APLP1P51693 650 aa12.89□□□□□ -0.35
RPRD1B-204ENST00000471511 LTBP3Q9NS15 1303 aa12.88□□□□□ -0.35
RPRD1B-204ENST00000471511 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
RPRD1B-204ENST00000471511 CHL1O00533 1208 aa12.88□□□□□ -0.35
RPRD1B-204ENST00000471511 NTSR2O95665 410 aa12.88□□□□□ -0.35
RPRD1B-204ENST00000471511 CRY2Q49AN0 593 aa12.88□□□□□ -0.35
RPRD1B-204ENST00000471511 CCDC184Q52MB2 194 aa12.88□□□□□ -0.35
RPRD1B-204ENST00000471511 SYNE4Q8N205 404 aa12.88□□□□□ -0.35
RPRD1B-204ENST00000471511 ZNF428Q96B54 188 aa12.88□□□□□ -0.35
RPRD1B-204ENST00000471511 TAOK3Q9H2K8 898 aa12.88□□□□□ -0.35
RPRD1B-204ENST00000471511 PRKRIP1Q9H875 184 aaPredicted RBP12.88□□□□□ -0.35
RPRD1B-204ENST00000471511 ZNF277Q9NRM2 450 aaPredicted RBP12.88□□□□□ -0.35
RPRD1B-204ENST00000471511 TIAM2Q8IVF5 1701 aa12.88□□□□□ -0.35
RPRD1B-204ENST00000471511 CACNA1SQ13698 1873 aa12.87□□□□□ -0.35
RPRD1B-204ENST00000471511 VEGFAP15692 232 aaPredicted RBP12.87□□□□□ -0.35
RPRD1B-204ENST00000471511 FSTL1Q12841 308 aa12.87□□□□□ -0.35
RPRD1B-204ENST00000471511 MAPK8IP2Q13387 824 aaPredicted RBP12.87□□□□□ -0.35
RPRD1B-204ENST00000471511 GIGYF2Q6Y7W6 1299 aaKnown RBP12.87□□□□□ -0.35
RPRD1B-204ENST00000471511 PNNQ9H307 717 aaKnown RBP12.87□□□□□ -0.35
RPRD1B-204ENST00000471511 NUP98P52948 1817 aa12.87□□□□□ -0.35
RPRD1B-204ENST00000471511 COL4A5P29400 1685 aa12.86□□□□□ -0.35
RPRD1B-204ENST00000471511 C16orf71Q8IYS4 520 aaPredicted RBP12.86□□□□□ -0.35
RPRD1B-204ENST00000471511 RUNDC1Q96C34 613 aa12.86□□□□□ -0.35
RPRD1B-204ENST00000471511 ARFGEF2Q9Y6D5 1785 aa12.86□□□□□ -0.35
RPRD1B-204ENST00000471511 ZNF541Q9H0D2 1346 aa12.86□□□□□ -0.35
RPRD1B-204ENST00000471511 CCDC93Q567U6 631 aa12.85□□□□□ -0.35
RPRD1B-204ENST00000471511 KIF6Q6ZMV9 814 aa12.85□□□□□ -0.35
RPRD1B-204ENST00000471511 COPS6Q7L5N1 327 aa12.85□□□□□ -0.35
RPRD1B-204ENST00000471511 XAGE3Q8WTP9 111 aa12.85□□□□□ -0.35
RPRD1B-204ENST00000471511 ERBB4Q15303 1308 aa12.85□□□□□ -0.35
RPRD1B-204ENST00000471511 WDR90Q96KV7 1748 aa12.85□□□□□ -0.35
RPRD1B-204ENST00000471511 GTF2E1P29083 439 aaPredicted RBP12.84□□□□□ -0.35
RPRD1B-204ENST00000471511 HOXA10P31260 410 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms