RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 TSR2Q969E8 191 aaKnown RBP19.68■□□□□ 0.74
ABCF3-208ENST00000471226 DDX21Q9NR30 783 aaKnown RBP eCLIP19.68■□□□□ 0.74
ABCF3-208ENST00000471226 ZNF652Q9Y2D9 606 aa19.68■□□□□ 0.74
ABCF3-208ENST00000471226 BRCA1P38398 1863 aaKnown RBP19.68■□□□□ 0.74
ABCF3-208ENST00000471226 ANXA1P04083 346 aa19.67■□□□□ 0.74
ABCF3-208ENST00000471226 TGFB2P61812 414 aa19.67■□□□□ 0.74
ABCF3-208ENST00000471226 MAP3K15Q6ZN16 1313 aa19.67■□□□□ 0.74
ABCF3-208ENST00000471226 ZNF521Q96K83 1311 aa19.67■□□□□ 0.74
ABCF3-208ENST00000471226 PXDNLA1KZ92 1463 aa19.67■□□□□ 0.74
ABCF3-208ENST00000471226 DCAF8L1A6NGE4 600 aa19.66■□□□□ 0.74
ABCF3-208ENST00000471226 HLFQ16534 295 aa19.66■□□□□ 0.74
ABCF3-208ENST00000471226 CARMIL3Q8ND23 1372 aa19.66■□□□□ 0.74
ABCF3-208ENST00000471226 ANKRD31Q8N7Z5 1873 aa19.65■□□□□ 0.74
ABCF3-208ENST00000471226 ELL2O00472 640 aaPredicted RBP19.65■□□□□ 0.74
ABCF3-208ENST00000471226 KIF6Q6ZMV9 814 aa19.65■□□□□ 0.74
ABCF3-208ENST00000471226 SETDB2Q96T68 719 aa19.65■□□□□ 0.74
ABCF3-208ENST00000471226 CHPF2Q9P2E5 772 aa19.65■□□□□ 0.74
ABCF3-208ENST00000471226 DBF4Q9UBU7 674 aaPredicted RBP19.65■□□□□ 0.74
ABCF3-208ENST00000471226 CACNA1FO60840 1977 aa19.64■□□□□ 0.74
ABCF3-208ENST00000471226 TSPYL6Q8N831 410 aa19.64■□□□□ 0.73
ABCF3-208ENST00000471226 SPINK5Q9NQ38 1064 aaPredicted RBP19.64■□□□□ 0.73
ABCF3-208ENST00000471226 FANCIQ9NVI1 1328 aa19.64■□□□□ 0.73
ABCF3-208ENST00000471226 ANKRD36CQ5JPF3 1778 aa19.64■□□□□ 0.73
ABCF3-208ENST00000471226 COPS6Q7L5N1 327 aa19.63■□□□□ 0.73
ABCF3-208ENST00000471226 CHD4Q14839 1912 aa19.63■□□□□ 0.73
ABCF3-208ENST00000471226 DLEC1Q9Y238 1755 aa19.62■□□□□ 0.73
ABCF3-208ENST00000471226 ATP10DQ9P241 1426 aa19.62■□□□□ 0.73
ABCF3-208ENST00000471226 PRR5LQ6MZQ0 368 aa19.62■□□□□ 0.73
ABCF3-208ENST00000471226 GIGYF2Q6Y7W6 1299 aaKnown RBP19.62■□□□□ 0.73
ABCF3-208ENST00000471226 XAGE3Q8WTP9 111 aa19.62■□□□□ 0.73
ABCF3-208ENST00000471226 CHMP4AQ9BY43 222 aa19.62■□□□□ 0.73
ABCF3-208ENST00000471226 ZBTB3Q9H5J0 574 aa19.62■□□□□ 0.73
ABCF3-208ENST00000471226 NIP7Q9Y221 180 aaKnown RBP eCLIP19.62■□□□□ 0.73
ABCF3-208ENST00000471226 A0A0G2JLW4 131 aa19.61■□□□□ 0.73
ABCF3-208ENST00000471226 KCNA3P22001 575 aa19.61■□□□□ 0.73
ABCF3-208ENST00000471226 HYPKQ9NX55 129 aa19.61■□□□□ 0.73
ABCF3-208ENST00000471226 DPEP1P16444 411 aa19.6■□□□□ 0.73
ABCF3-208ENST00000471226 YBX3P16989 372 aaKnown RBP eCLIP19.6■□□□□ 0.739e-8■■■□□ 15.1
ABCF3-208ENST00000471226 GOLGA2Q08379 1002 aa19.6■□□□□ 0.73
ABCF3-208ENST00000471226 AIMP1Q12904 312 aaKnown RBP19.6■□□□□ 0.73
ABCF3-208ENST00000471226 GPR162Q16538 588 aa19.6■□□□□ 0.73
ABCF3-208ENST00000471226 TWISTNBQ3B726 338 aaPredicted RBP19.6■□□□□ 0.73
ABCF3-208ENST00000471226 GOLGB1Q14789 3259 aaKnown RBP19.6■□□□□ 0.73
ABCF3-208ENST00000471226 CCDC30Q5VVM6 783 aa19.59■□□□□ 0.73
ABCF3-208ENST00000471226 ZNF34Q8IZ26 560 aa19.59■□□□□ 0.73
ABCF3-208ENST00000471226 MYH16Q9H6N6 1097 aa19.59■□□□□ 0.73
ABCF3-208ENST00000471226 ARFGEF1Q9Y6D6 1849 aa19.59■□□□□ 0.73
ABCF3-208ENST00000471226 ARFGEF2Q9Y6D5 1785 aa19.58■□□□□ 0.73
ABCF3-208ENST00000471226 EXOSC9Q06265 439 aaKnown RBP19.58■□□□□ 0.72
ABCF3-208ENST00000471226 CNBD1Q8NA66 436 aa19.58■□□□□ 0.72
ABCF3-208ENST00000471226 CHRNA5P30532 468 aa19.57■□□□□ 0.72
ABCF3-208ENST00000471226 NBPF5PQ86XG9 351 aaPredicted RBP19.57■□□□□ 0.72
ABCF3-208ENST00000471226 PELP1Q8IZL8 1130 aaKnown RBP19.57■□□□□ 0.72
ABCF3-208ENST00000471226 BRIP1Q9BX63 1249 aa19.57■□□□□ 0.72
ABCF3-208ENST00000471226 UTRNP46939 3433 aa19.57■□□□□ 0.72
ABCF3-208ENST00000471226 COL11A2P13942 1736 aaPredicted RBP19.56■□□□□ 0.72
ABCF3-208ENST00000471226 UBN2Q6ZU65 1347 aa19.56■□□□□ 0.72
ABCF3-208ENST00000471226 VAMP4O75379 141 aa19.56■□□□□ 0.72
ABCF3-208ENST00000471226 TPTE2Q6XPS3 522 aa19.56■□□□□ 0.72
ABCF3-208ENST00000471226 ANKRD13DQ6ZTN6 518 aa19.56■□□□□ 0.72
ABCF3-208ENST00000471226 CCDC24Q8N4L8 307 aa19.56■□□□□ 0.72
ABCF3-208ENST00000471226 PLBD2Q8NHP8 589 aa19.56■□□□□ 0.72
ABCF3-208ENST00000471226 PHAXQ9H814 394 aaKnown RBP19.56■□□□□ 0.72
ABCF3-208ENST00000471226 IBTKQ9P2D0 1353 aaPredicted RBP19.56■□□□□ 0.72
ABCF3-208ENST00000471226 GRIN3BO60391 1043 aa19.55■□□□□ 0.72
ABCF3-208ENST00000471226 GPTP24298 496 aa19.55■□□□□ 0.72
ABCF3-208ENST00000471226 ST5P78524 1137 aa19.55■□□□□ 0.72
ABCF3-208ENST00000471226 HSP90AB3PQ58FF7 597 aa19.55■□□□□ 0.72
ABCF3-208ENST00000471226 PIM2Q9P1W9 311 aa19.55■□□□□ 0.72
ABCF3-208ENST00000471226 PDZRN3Q9UPQ7 1066 aa19.55■□□□□ 0.72
ABCF3-208ENST00000471226 PDE6BP35913 854 aa19.54■□□□□ 0.72
ABCF3-208ENST00000471226 TCIRG1Q13488 830 aa19.54■□□□□ 0.72
ABCF3-208ENST00000471226 WWC3Q9ULE0 1092 aa19.54■□□□□ 0.72
ABCF3-208ENST00000471226 FAM177BA6PVY3 158 aa19.53■□□□□ 0.72
ABCF3-208ENST00000471226 E9PSI1 815 aa19.53■□□□□ 0.72
ABCF3-208ENST00000471226 H0YIN7 160 aa19.53■□□□□ 0.72
ABCF3-208ENST00000471226 NPHP1O15259 732 aa19.53■□□□□ 0.72
ABCF3-208ENST00000471226 SLFN5Q08AF3 891 aa19.53■□□□□ 0.72
ABCF3-208ENST00000471226 PARP10Q53GL7 1025 aa19.53■□□□□ 0.72
ABCF3-208ENST00000471226 SUSD4Q5VX71 490 aa19.53■□□□□ 0.72
ABCF3-208ENST00000471226 NYXQ9GZU5 481 aa19.53■□□□□ 0.72
ABCF3-208ENST00000471226 KLRG2A4D1S0 409 aaPredicted RBP19.52■□□□□ 0.72
ABCF3-208ENST00000471226 C2CD5Q86YS7 1000 aa19.52■□□□□ 0.72
ABCF3-208ENST00000471226 STK31Q9BXU1 1019 aa19.52■□□□□ 0.72
ABCF3-208ENST00000471226 BCS1LQ9Y276 419 aa19.52■□□□□ 0.72
ABCF3-208ENST00000471226 CACNA1SQ13698 1873 aa19.52■□□□□ 0.71
ABCF3-208ENST00000471226 TCERG1O14776 1098 aaKnown RBP19.51■□□□□ 0.71
ABCF3-208ENST00000471226 NTSR2O95665 410 aa19.51■□□□□ 0.71
ABCF3-208ENST00000471226 ISCA1Q9BUE6 129 aa19.51■□□□□ 0.71
ABCF3-208ENST00000471226 TNRC6CQ9HCJ0 1690 aaKnown RBP19.51■□□□□ 0.71
ABCF3-208ENST00000471226 RIC1Q4ADV7 1423 aa19.51■□□□□ 0.71
ABCF3-208ENST00000471226 DALRD3Q5D0E6 543 aaKnown RBP19.5■□□□□ 0.71
ABCF3-208ENST00000471226 PPP1R42Q7Z4L9 355 aa19.5■□□□□ 0.71
ABCF3-208ENST00000471226 NLRP10Q86W26 655 aa19.5■□□□□ 0.71
ABCF3-208ENST00000471226 NUTM1Q86Y26 1132 aa19.5■□□□□ 0.71
ABCF3-208ENST00000471226 TRMT2AQ8IZ69 625 aaKnown RBP19.5■□□□□ 0.71
ABCF3-208ENST00000471226 CDCA7LQ96GN5 454 aa19.5■□□□□ 0.71
ABCF3-208ENST00000471226 ABCC12Q96J65 1359 aa19.49■□□□□ 0.71
ABCF3-208ENST00000471226 SLC4A2P04920 1241 aa19.49■□□□□ 0.71
ABCF3-208ENST00000471226 GTF2E1P29083 439 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms