RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 TSPYL6Q8N831 410 aa16.06■□□□□ 0.16
SCNM1-205ENST00000471039 CHPF2Q9P2E5 772 aa16.06■□□□□ 0.16
SCNM1-205ENST00000471039 ATP10DQ9P241 1426 aa16.05■□□□□ 0.16
SCNM1-205ENST00000471039 CARMIL3Q8ND23 1372 aa16.04■□□□□ 0.16
SCNM1-205ENST00000471039 MAP3K15Q6ZN16 1313 aa16.04■□□□□ 0.16
SCNM1-205ENST00000471039 POLRMTO00411 1230 aaKnown RBP16.04■□□□□ 0.16
SCNM1-205ENST00000471039 ELL2O00472 640 aaPredicted RBP16.04■□□□□ 0.16
SCNM1-205ENST00000471039 NFIXQ14938 502 aa16.04■□□□□ 0.16
SCNM1-205ENST00000471039 TTLL7Q6ZT98 887 aa16.04■□□□□ 0.16
SCNM1-205ENST00000471039 KLHL34Q8N239 644 aa16.04■□□□□ 0.16
SCNM1-205ENST00000471039 MYH16Q9H6N6 1097 aa16.04■□□□□ 0.16
SCNM1-205ENST00000471039 DDX21Q9NR30 783 aaKnown RBP eCLIP16.04■□□□□ 0.16
SCNM1-205ENST00000471039 PXDNLA1KZ92 1463 aa16.03■□□□□ 0.16
SCNM1-205ENST00000471039 ARFGEF1Q9Y6D6 1849 aa16.03■□□□□ 0.16
SCNM1-205ENST00000471039 RGL2O15211 777 aa16.03■□□□□ 0.16
SCNM1-205ENST00000471039 TM4SF1P30408 202 aa16.03■□□□□ 0.16
SCNM1-205ENST00000471039 TWISTNBQ3B726 338 aaPredicted RBP16.03■□□□□ 0.16
SCNM1-205ENST00000471039 TBC1D9BQ66K14 1250 aa16.03■□□□□ 0.16
SCNM1-205ENST00000471039 KIF6Q6ZMV9 814 aa16.03■□□□□ 0.16
SCNM1-205ENST00000471039 PARP3Q9Y6F1 533 aa16.03■□□□□ 0.16
SCNM1-205ENST00000471039 GOLGA2Q08379 1002 aa16.02■□□□□ 0.16
SCNM1-205ENST00000471039 SYT17Q9BSW7 474 aa16.02■□□□□ 0.16
SCNM1-205ENST00000471039 DBF4Q9UBU7 674 aaPredicted RBP16.02■□□□□ 0.16
SCNM1-205ENST00000471039 ZNF652Q9Y2D9 606 aa16.02■□□□□ 0.16
SCNM1-205ENST00000471039 DDX60Q8IY21 1712 aaKnown RBP16.02■□□□□ 0.15
SCNM1-205ENST00000471039 EXOSC9Q06265 439 aaKnown RBP16.01■□□□□ 0.15
SCNM1-205ENST00000471039 NLGN2Q8NFZ4 835 aa16.01■□□□□ 0.15
SCNM1-205ENST00000471039 ZBTB3Q9H5J0 574 aa16.01■□□□□ 0.15
SCNM1-205ENST00000471039 ERVV-1B6SEH8 477 aa16■□□□□ 0.15
SCNM1-205ENST00000471039 E9PSI1 815 aa16■□□□□ 0.15
SCNM1-205ENST00000471039 HLFQ16534 295 aa16■□□□□ 0.15
SCNM1-205ENST00000471039 CLEC4GQ6UXB4 293 aa16■□□□□ 0.15
SCNM1-205ENST00000471039 BICDL1Q6ZP65 573 aa16■□□□□ 0.15
SCNM1-205ENST00000471039 XAGE3Q8WTP9 111 aa16■□□□□ 0.15
SCNM1-205ENST00000471039 CD2APQ9Y5K6 639 aa16■□□□□ 0.15
SCNM1-205ENST00000471039 GOLGB1Q14789 3259 aaKnown RBP15.99■□□□□ 0.15
SCNM1-205ENST00000471039 HNRNPUQ00839 825 aaKnown RBP eCLIP15.99■□□□□ 0.15
SCNM1-205ENST00000471039 CCDC30Q5VVM6 783 aa15.99■□□□□ 0.15
SCNM1-205ENST00000471039 COPS6Q7L5N1 327 aa15.99■□□□□ 0.15
SCNM1-205ENST00000471039 IBTKQ9P2D0 1353 aaPredicted RBP15.99■□□□□ 0.15
SCNM1-205ENST00000471039 SLFN5Q08AF3 891 aa15.98■□□□□ 0.15
SCNM1-205ENST00000471039 CDCA7LQ96GN5 454 aa15.98■□□□□ 0.15
SCNM1-205ENST00000471039 HYPKQ9NX55 129 aa15.98■□□□□ 0.15
SCNM1-205ENST00000471039 CHD4Q14839 1912 aa15.98■□□□□ 0.15
SCNM1-205ENST00000471039 UBN2Q6ZU65 1347 aa15.97■□□□□ 0.15
SCNM1-205ENST00000471039 SERPINB2P05120 415 aa15.97■□□□□ 0.15
SCNM1-205ENST00000471039 AIMP1Q12904 312 aaKnown RBP15.97■□□□□ 0.15
SCNM1-205ENST00000471039 GIGYF2Q6Y7W6 1299 aaKnown RBP15.97■□□□□ 0.15
SCNM1-205ENST00000471039 CHMP4AQ9BY43 222 aa15.97■□□□□ 0.15
SCNM1-205ENST00000471039 NIP7Q9Y221 180 aaKnown RBP eCLIP15.97■□□□□ 0.15
SCNM1-205ENST00000471039 MYH3P11055 1940 aa15.97■□□□□ 0.15
SCNM1-205ENST00000471039 VAMP4O75379 141 aa15.96■□□□□ 0.15
SCNM1-205ENST00000471039 SETDB2Q96T68 719 aa15.96■□□□□ 0.15
SCNM1-205ENST00000471039 STK31Q9BXU1 1019 aa15.96■□□□□ 0.15
SCNM1-205ENST00000471039 PHAXQ9H814 394 aaKnown RBP15.96■□□□□ 0.15
SCNM1-205ENST00000471039 RIC1Q4ADV7 1423 aa15.95■□□□□ 0.14
SCNM1-205ENST00000471039 TCERG1O14776 1098 aaKnown RBP15.95■□□□□ 0.14
SCNM1-205ENST00000471039 PRR5LQ6MZQ0 368 aa15.95■□□□□ 0.14
SCNM1-205ENST00000471039 TRMT2AQ8IZ69 625 aaKnown RBP15.95■□□□□ 0.14
SCNM1-205ENST00000471039 CNBD1Q8NA66 436 aa15.95■□□□□ 0.14
SCNM1-205ENST00000471039 ABCC12Q96J65 1359 aa15.95■□□□□ 0.14
SCNM1-205ENST00000471039 ZBED9Q6R2W3 1325 aa15.94■□□□□ 0.14
SCNM1-205ENST00000471039 GPTP24298 496 aa15.94■□□□□ 0.14
SCNM1-205ENST00000471039 PLBD2Q8NHP8 589 aa15.94■□□□□ 0.14
SCNM1-205ENST00000471039 ADCY9O60503 1353 aa15.93■□□□□ 0.14
SCNM1-205ENST00000471039 NBPF5PQ86XG9 351 aaPredicted RBP15.93■□□□□ 0.14
SCNM1-205ENST00000471039 ZNF34Q8IZ26 560 aa15.93■□□□□ 0.14
SCNM1-205ENST00000471039 HSP90AB3PQ58FF7 597 aa15.92■□□□□ 0.14
SCNM1-205ENST00000471039 ANKRD13DQ6ZTN6 518 aa15.92■□□□□ 0.14
SCNM1-205ENST00000471039 NPHP1O15259 732 aa15.91■□□□□ 0.14
SCNM1-205ENST00000471039 NTSR2O95665 410 aa15.91■□□□□ 0.14
SCNM1-205ENST00000471039 TGFB2P61812 414 aa15.91■□□□□ 0.14
SCNM1-205ENST00000471039 ST5P78524 1137 aa15.91■□□□□ 0.14
SCNM1-205ENST00000471039 G2E3Q7L622 706 aa15.91■□□□□ 0.14
SCNM1-205ENST00000471039 CCDC24Q8N4L8 307 aa15.91■□□□□ 0.14
SCNM1-205ENST00000471039 SLX4Q8IY92 1834 aa15.9■□□□□ 0.14
SCNM1-205ENST00000471039 FAM177BA6PVY3 158 aa15.9■□□□□ 0.14
SCNM1-205ENST00000471039 DDX58O95786 925 aaKnown RBP15.9■□□□□ 0.14
SCNM1-205ENST00000471039 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
SCNM1-205ENST00000471039 FLIIQ13045 1269 aa15.9■□□□□ 0.14
SCNM1-205ENST00000471039 TCIRG1Q13488 830 aa15.9■□□□□ 0.14
SCNM1-205ENST00000471039 PARP10Q53GL7 1025 aa15.9■□□□□ 0.14
SCNM1-205ENST00000471039 NYXQ9GZU5 481 aa15.9■□□□□ 0.14
SCNM1-205ENST00000471039 SPEF2Q9C093 1822 aa15.89■□□□□ 0.13
SCNM1-205ENST00000471039 TAF1P21675 1872 aa15.89■□□□□ 0.13
SCNM1-205ENST00000471039 DPEP1P16444 411 aa15.89■□□□□ 0.13
SCNM1-205ENST00000471039 SUSD4Q5VX71 490 aa15.89■□□□□ 0.13
SCNM1-205ENST00000471039 RIC3Q7Z5B4 369 aa15.89■□□□□ 0.13
SCNM1-205ENST00000471039 FER1L6Q2WGJ9 1857 aa15.88■□□□□ 0.13
SCNM1-205ENST00000471039 A0A0G2JLW4 131 aa15.88■□□□□ 0.13
SCNM1-205ENST00000471039 KCNA3P22001 575 aa15.88■□□□□ 0.13
SCNM1-205ENST00000471039 CHRNA5P30532 468 aa15.88■□□□□ 0.13
SCNM1-205ENST00000471039 TPTE2Q6XPS3 522 aa15.88■□□□□ 0.13
SCNM1-205ENST00000471039 NLRP10Q86W26 655 aa15.88■□□□□ 0.13
SCNM1-205ENST00000471039 NUTM1Q86Y26 1132 aa15.88■□□□□ 0.13
SCNM1-205ENST00000471039 ISCA1Q9BUE6 129 aa15.88■□□□□ 0.13
SCNM1-205ENST00000471039 BRIP1Q9BX63 1249 aa15.88■□□□□ 0.13
SCNM1-205ENST00000471039 WWC3Q9ULE0 1092 aa15.88■□□□□ 0.13
SCNM1-205ENST00000471039 RNF123Q5XPI4 1314 aa15.88■□□□□ 0.13
SCNM1-205ENST00000471039 UTRNP46939 3433 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms