RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 EPB41L2O43491 1005 aaKnown RBP12.35□□□□□ -0.43
RRP1B-202ENST00000470886 ADCY5O95622 1261 aa12.35□□□□□ -0.43
RRP1B-202ENST00000470886 ATP8B2P98198 1209 aa12.35□□□□□ -0.43
RRP1B-202ENST00000470886 PPFIBP1Q86W92 1011 aa12.35□□□□□ -0.43
RRP1B-202ENST00000470886 TXLNBQ8N3L3 684 aa12.35□□□□□ -0.43
RRP1B-202ENST00000470886 BBXQ8WY36 941 aaPredicted RBP12.35□□□□□ -0.43
RRP1B-202ENST00000470886 CEBPZQ03701 1054 aaKnown RBP12.35□□□□□ -0.43
RRP1B-202ENST00000470886 FMNL2Q96PY5 1086 aa12.35□□□□□ -0.43
RRP1B-202ENST00000470886 CEP126Q9P2H0 1117 aa12.35□□□□□ -0.43
RRP1B-202ENST00000470886 ZSCAN12O43309 604 aa12.34□□□□□ -0.43
RRP1B-202ENST00000470886 IL13P35225 146 aa12.34□□□□□ -0.43
RRP1B-202ENST00000470886 ZSCAN16Q9H4T2 348 aaPredicted RBP12.34□□□□□ -0.43
RRP1B-202ENST00000470886 NEXMIFQ5QGS0 1516 aa12.34□□□□□ -0.43
RRP1B-202ENST00000470886 F6X3S4 739 aa12.34□□□□□ -0.43
RRP1B-202ENST00000470886 ZBTB7BO15156 539 aaPredicted RBP12.34□□□□□ -0.43
RRP1B-202ENST00000470886 SIL1Q9H173 461 aa12.34□□□□□ -0.43
RRP1B-202ENST00000470886 PAXBP1Q9Y5B6 917 aa12.34□□□□□ -0.43
RRP1B-202ENST00000470886 SFPQP23246 707 aaKnown RBP eCLIP12.34□□□□□ -0.43
RRP1B-202ENST00000470886 IMMTQ16891 758 aaKnown RBP12.34□□□□□ -0.43
RRP1B-202ENST00000470886 MYOM1P52179 1685 aa12.34□□□□□ -0.43
RRP1B-202ENST00000470886 SLC3A2P08195 630 aaKnown RBP12.34□□□□□ -0.43
RRP1B-202ENST00000470886 LEKR1Q6ZMV7 388 aa12.34□□□□□ -0.43
RRP1B-202ENST00000470886 PLEKHM2Q8IWE5 1019 aa12.34□□□□□ -0.43
RRP1B-202ENST00000470886 FRMPD1Q5SYB0 1578 aa12.33□□□□□ -0.43
RRP1B-202ENST00000470886 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
RRP1B-202ENST00000470886 PANK2Q9BZ23 570 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 ADGRB1O14514 1584 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 FLT4P35916 1363 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 TUBB4AP04350 444 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 GJB2P29033 226 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 USP26Q9BXU7 913 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 TULP4Q9NRJ4 1543 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 PAXIP1Q6ZW49 1069 aaPredicted RBP12.33□□□□□ -0.44
RRP1B-202ENST00000470886 MIS18AQ9NYP9 233 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 AKAP2Q9Y2D5 859 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 ABCC4O15439 1325 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 CABP4P57796 275 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 STX1AQ16623 288 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 CCDC57Q2TAC2 916 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 CEP85Q6P2H3 762 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 UBXN4Q92575 508 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 CLIP2Q9UDT6 1046 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 NOL7Q9UMY1 257 aaKnown RBP12.33□□□□□ -0.44
RRP1B-202ENST00000470886 CEP131Q9UPN4 1083 aa12.33□□□□□ -0.44
RRP1B-202ENST00000470886 ARHGEF10O15013 1369 aa12.32□□□□□ -0.44
RRP1B-202ENST00000470886 FILIP1Q7Z7B0 1213 aa12.32□□□□□ -0.44
RRP1B-202ENST00000470886 RHPN1Q8TCX5 695 aa12.32□□□□□ -0.44
RRP1B-202ENST00000470886 MAGEC2Q9UBF1 373 aaPredicted RBP12.32□□□□□ -0.44
RRP1B-202ENST00000470886 MEIS3Q99687 375 aa12.32□□□□□ -0.44
RRP1B-202ENST00000470886 TTC41PQ6P2S7 1318 aa12.32□□□□□ -0.44
RRP1B-202ENST00000470886 DIP2CQ9Y2E4 1556 aa12.32□□□□□ -0.44
RRP1B-202ENST00000470886 ZNF445P59923 1031 aa12.32□□□□□ -0.44
RRP1B-202ENST00000470886 GBP3Q9H0R5 595 aa12.32□□□□□ -0.44
RRP1B-202ENST00000470886 ZNHIT6Q9NWK9 470 aaKnown RBP12.32□□□□□ -0.44
RRP1B-202ENST00000470886 C8orf58Q8NAV2 365 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 TNNQ9UQP3 1299 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 AOX1Q06278 1338 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 MROH1Q8NDA8 1641 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 CCDC69A6NI79 296 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 ALDH1L1O75891 902 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 STIM1Q13586 685 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 PPP1R42Q7Z4L9 355 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 ACEP12821 1306 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 CCDC171Q6TFL3 1326 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 MAPK8IP2Q13387 824 aaPredicted RBP12.31□□□□□ -0.44
RRP1B-202ENST00000470886 FERMT3Q86UX7 667 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 PNPLA6Q8IY17 1366 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 FAM200AQ8TCP9 573 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 GNL3LQ9NVN8 582 aaKnown RBP12.31□□□□□ -0.44
RRP1B-202ENST00000470886 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
RRP1B-202ENST00000470886 PTCH1Q13635 1447 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 MROH2AA6NES4 1674 aa12.31□□□□□ -0.44
RRP1B-202ENST00000470886 GOLGA6L9A6NEM1 432 aa12.3□□□□□ -0.44
RRP1B-202ENST00000470886 TNNT1P13805 278 aa12.3□□□□□ -0.44
RRP1B-202ENST00000470886 CAGE1Q8TC20 777 aa12.3□□□□□ -0.44
RRP1B-202ENST00000470886 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
RRP1B-202ENST00000470886 LUC7LQ9NQ29 371 aaKnown RBP12.3□□□□□ -0.44
RRP1B-202ENST00000470886 ALKQ9UM73 1620 aa12.3□□□□□ -0.44
RRP1B-202ENST00000470886 NOLC1Q14978 699 aaKnown RBP eCLIP12.3□□□□□ -0.44
RRP1B-202ENST00000470886 IQCEQ6IPM2 695 aa12.3□□□□□ -0.44
RRP1B-202ENST00000470886 TMCO3Q6UWJ1 677 aa12.3□□□□□ -0.44
RRP1B-202ENST00000470886 MPNDQ8N594 471 aa12.3□□□□□ -0.44
RRP1B-202ENST00000470886 CNNM1Q9NRU3 951 aa12.3□□□□□ -0.44
RRP1B-202ENST00000470886 CLSTN1O94985 981 aa12.3□□□□□ -0.44
RRP1B-202ENST00000470886 CAMK4Q16566 473 aa12.3□□□□□ -0.44
RRP1B-202ENST00000470886 ZNF165P49910 485 aa12.29□□□□□ -0.44
RRP1B-202ENST00000470886 ANKLE2Q86XL3 938 aa12.29□□□□□ -0.44
RRP1B-202ENST00000470886 SLC26A8Q96RN1 970 aa12.29□□□□□ -0.44
RRP1B-202ENST00000470886 YEATS2Q9ULM3 1422 aa12.29□□□□□ -0.44
RRP1B-202ENST00000470886 RTL1A6NKG5 1358 aa12.29□□□□□ -0.44
RRP1B-202ENST00000470886 F13A1P00488 732 aa12.29□□□□□ -0.44
RRP1B-202ENST00000470886 USP48Q86UV5 1035 aa12.29□□□□□ -0.44
RRP1B-202ENST00000470886 ZNF526Q8TF50 670 aaPredicted RBP12.29□□□□□ -0.44
RRP1B-202ENST00000470886 TSPYL1Q9H0U9 437 aa12.29□□□□□ -0.44
RRP1B-202ENST00000470886 SBNO1A3KN83 1393 aa12.29□□□□□ -0.44
RRP1B-202ENST00000470886 FAM83GA6ND36 823 aa12.29□□□□□ -0.44
RRP1B-202ENST00000470886 EIF4A2Q14240 407 aaKnown RBP12.29□□□□□ -0.44
RRP1B-202ENST00000470886 CCDC150Q8NCX0 1101 aa12.29□□□□□ -0.44
RRP1B-202ENST00000470886 IFT172Q9UG01 1749 aa12.28□□□□□ -0.44
RRP1B-202ENST00000470886 PRIM1P49642 420 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms