RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 RRAGCQ9HB90 399 aa22.29■■□□□ 1.16
C4A-250ENST00000469975 ARFGEF2Q9Y6D5 1785 aa22.29■■□□□ 1.16
C4A-250ENST00000469975 DDX10Q13206 875 aaKnown RBP22.28■■□□□ 1.16
C4A-250ENST00000469975 NGEFQ8N5V2 710 aa22.28■■□□□ 1.16
C4A-250ENST00000469975 MAPK8IP3Q9UPT6 1336 aa22.28■■□□□ 1.16
C4A-250ENST00000469975 NUP98P52948 1817 aa22.27■■□□□ 1.16
C4A-250ENST00000469975 FAM177BA6PVY3 158 aa22.27■■□□□ 1.16
C4A-250ENST00000469975 LMNB1P20700 586 aa22.27■■□□□ 1.16
C4A-250ENST00000469975 ST5P78524 1137 aa22.27■■□□□ 1.16
C4A-250ENST00000469975 HLFQ16534 295 aa22.27■■□□□ 1.16
C4A-250ENST00000469975 DICER1Q9UPY3 1922 aaKnown RBP22.27■■□□□ 1.16
C4A-250ENST00000469975 KDM2BQ8NHM5 1336 aa22.27■■□□□ 1.16
C4A-250ENST00000469975 EIF4A1P60842 406 aaKnown RBP22.26■■□□□ 1.15
C4A-250ENST00000469975 NBPF5PQ86XG9 351 aaPredicted RBP22.26■■□□□ 1.15
C4A-250ENST00000469975 CLEC4GQ6UXB4 293 aa22.25■■□□□ 1.15
C4A-250ENST00000469975 NIP7Q9Y221 180 aaKnown RBP eCLIP22.25■■□□□ 1.15
C4A-250ENST00000469975 ZNF652Q9Y2D9 606 aa22.25■■□□□ 1.15
C4A-250ENST00000469975 SRGNP10124 158 aa22.24■■□□□ 1.15
C4A-250ENST00000469975 C16orf71Q8IYS4 520 aaPredicted RBP22.24■■□□□ 1.15
C4A-250ENST00000469975 PNISRQ8TF01 805 aaKnown RBP22.24■■□□□ 1.15
C4A-250ENST00000469975 PDZRN3Q9UPQ7 1066 aa22.24■■□□□ 1.15
C4A-250ENST00000469975 RALBP1Q15311 655 aa22.23■■□□□ 1.15
C4A-250ENST00000469975 RRP7AQ9Y3A4 280 aaKnown RBP22.23■■□□□ 1.15
C4A-250ENST00000469975 MYL6BP14649 208 aa22.22■■□□□ 1.15
C4A-250ENST00000469975 STYK1Q6J9G0 422 aa22.22■■□□□ 1.15
C4A-250ENST00000469975 PRPF40BQ6NWY9 871 aaKnown RBP22.22■■□□□ 1.15
C4A-250ENST00000469975 RBM46Q8TBY0 533 aaKnown RBP22.22■■□□□ 1.15
C4A-250ENST00000469975 WDR90Q96KV7 1748 aa22.22■■□□□ 1.15
C4A-250ENST00000469975 RIPK4P57078 832 aa22.21■■□□□ 1.15
C4A-250ENST00000469975 TTLL7Q6ZT98 887 aa22.21■■□□□ 1.15
C4A-250ENST00000469975 CNKSR1Q969H4 720 aa22.21■■□□□ 1.15
C4A-250ENST00000469975 MASTLQ96GX5 879 aa22.21■■□□□ 1.15
C4A-250ENST00000469975 PNNQ9H307 717 aaKnown RBP22.21■■□□□ 1.15
C4A-250ENST00000469975 CCDC146Q8IYE0 955 aa22.2■■□□□ 1.14
C4A-250ENST00000469975 ZC3H4Q9UPT8 1303 aaKnown RBP22.2■■□□□ 1.14
C4A-250ENST00000469975 GLTPD2A6NH11 291 aa22.19■■□□□ 1.14
C4A-250ENST00000469975 APLP1P51693 650 aa22.19■■□□□ 1.14
C4A-250ENST00000469975 HTRA3P83110 453 aa22.19■■□□□ 1.14
C4A-250ENST00000469975 MYBBP1AQ9BQG0 1328 aaKnown RBP22.18■■□□□ 1.14
C4A-250ENST00000469975 OLFM4Q6UX06 510 aa22.18■■□□□ 1.14
C4A-250ENST00000469975 TPTE2Q6XPS3 522 aa22.18■■□□□ 1.14
C4A-250ENST00000469975 ZBTB3Q9H5J0 574 aa22.18■■□□□ 1.14
C4A-250ENST00000469975 TSPYL4Q9UJ04 414 aa22.18■■□□□ 1.14
C4A-250ENST00000469975 ABCC12Q96J65 1359 aa22.17■■□□□ 1.14
C4A-250ENST00000469975 MAP3K15Q6ZN16 1313 aa22.17■■□□□ 1.14
C4A-250ENST00000469975 TMPOP42166 694 aaKnown RBP22.17■■□□□ 1.14
C4A-250ENST00000469975 NUTM1Q86Y26 1132 aa22.17■■□□□ 1.14
C4A-250ENST00000469975 TAOK3Q9H2K8 898 aa22.17■■□□□ 1.14
C4A-250ENST00000469975 GPTP24298 496 aa22.16■■□□□ 1.14
C4A-250ENST00000469975 NEUROD2Q15784 382 aa22.16■■□□□ 1.14
C4A-250ENST00000469975 ERFEQ4G0M1 354 aa22.16■■□□□ 1.14
C4A-250ENST00000469975 RGL2O15211 777 aa22.15■■□□□ 1.14
C4A-250ENST00000469975 NPR1P16066 1061 aa22.15■■□□□ 1.14
C4A-250ENST00000469975 KIF6Q6ZMV9 814 aa22.15■■□□□ 1.14
C4A-250ENST00000469975 C7orf43Q8WVR3 580 aa22.15■■□□□ 1.14
C4A-250ENST00000469975 LTBP3Q9NS15 1303 aa22.14■■□□□ 1.14
C4A-250ENST00000469975 KLRG2A4D1S0 409 aaPredicted RBP22.14■■□□□ 1.13
C4A-250ENST00000469975 POTECB2RU33 542 aa22.14■■□□□ 1.13
C4A-250ENST00000469975 ANXA1P04083 346 aa22.14■■□□□ 1.13
C4A-250ENST00000469975 EIF2S2P20042 333 aaKnown RBP22.14■■□□□ 1.13
C4A-250ENST00000469975 GTF2E1P29083 439 aaPredicted RBP22.14■■□□□ 1.13
C4A-250ENST00000469975 UBN2Q6ZU65 1347 aa22.13■■□□□ 1.13
C4A-250ENST00000469975 ERVV-1B6SEH8 477 aa22.13■■□□□ 1.13
C4A-250ENST00000469975 VEGFAP15692 232 aaPredicted RBP22.13■■□□□ 1.13
C4A-250ENST00000469975 FSTL1Q12841 308 aa22.13■■□□□ 1.13
C4A-250ENST00000469975 PROSER3Q2NL68 480 aa22.13■■□□□ 1.13
C4A-250ENST00000469975 DNAJC5GQ8N7S2 189 aa22.13■■□□□ 1.13
C4A-250ENST00000469975 NECTIN2Q92692 538 aa22.12■■□□□ 1.13
C4A-250ENST00000469975 PDIA6Q15084 440 aa22.11■■□□□ 1.13
C4A-250ENST00000469975 KRT24Q2M2I5 525 aa22.11■■□□□ 1.13
C4A-250ENST00000469975 SUSD4Q5VX71 490 aa22.11■■□□□ 1.13
C4A-250ENST00000469975 CCDC93Q567U6 631 aa22.1■■□□□ 1.13
C4A-250ENST00000469975 SOGA3Q5TF21 947 aa22.1■■□□□ 1.13
C4A-250ENST00000469975 LRP10Q7Z4F1 713 aa22.1■■□□□ 1.13
C4A-250ENST00000469975 SLC51AQ86UW1 340 aa22.1■■□□□ 1.13
C4A-250ENST00000469975 SMC1BQ8NDV3 1235 aa22.1■■□□□ 1.13
C4A-250ENST00000469975 DDNO94850 711 aaPredicted RBP22.09■■□□□ 1.13
C4A-250ENST00000469975 DPY19L2Q6NUT2 758 aa22.09■■□□□ 1.13
C4A-250ENST00000469975 ZNF34Q8IZ26 560 aa22.09■■□□□ 1.13
C4A-250ENST00000469975 NYXQ9GZU5 481 aa22.09■■□□□ 1.13
C4A-250ENST00000469975 ZNF277Q9NRM2 450 aaPredicted RBP22.09■■□□□ 1.13
C4A-250ENST00000469975 TRIM35Q9UPQ4 493 aa22.09■■□□□ 1.13
C4A-250ENST00000469975 LAS1LQ9Y4W2 734 aaKnown RBP22.09■■□□□ 1.13
C4A-250ENST00000469975 ANKRD36CQ5JPF3 1778 aa22.09■■□□□ 1.13
C4A-250ENST00000469975 ERBB4Q15303 1308 aa22.08■■□□□ 1.13
C4A-250ENST00000469975 LMOD3Q0VAK6 560 aa22.08■■□□□ 1.13
C4A-250ENST00000469975 WDR43Q15061 677 aaKnown RBP eCLIP22.08■■□□□ 1.13
C4A-250ENST00000469975 ADAMTS8Q9UP79 889 aa22.08■■□□□ 1.13
C4A-250ENST00000469975 FKBP4Q02790 459 aaKnown RBP eCLIP22.07■■□□□ 1.12
C4A-250ENST00000469975 GIGYF2Q6Y7W6 1299 aaKnown RBP22.07■■□□□ 1.12
C4A-250ENST00000469975 C3orf67Q6ZVT6 689 aa22.07■■□□□ 1.12
C4A-250ENST00000469975 RUNDC1Q96C34 613 aa22.07■■□□□ 1.12
C4A-250ENST00000469975 NTSR2O95665 410 aa22.06■■□□□ 1.12
C4A-250ENST00000469975 CRY2Q49AN0 593 aa22.06■■□□□ 1.12
C4A-250ENST00000469975 LAMB2P55268 1798 aa22.05■■□□□ 1.12
C4A-250ENST00000469975 BABAM1Q9NWV8 329 aa22.05■■□□□ 1.12
C4A-250ENST00000469975 ZNF541Q9H0D2 1346 aa22.05■■□□□ 1.12
C4A-250ENST00000469975 IBTKQ9P2D0 1353 aaPredicted RBP22.04■■□□□ 1.12
C4A-250ENST00000469975 POTEIP0CG38 1075 aa22.04■■□□□ 1.12
C4A-250ENST00000469975 POTEJP0CG39 1038 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms