RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 CCER2I3L3R5 266 aa11.91□□□□□ -0.5
FN1-216ENST00000469569 ZBTB7AO95365 584 aa11.91□□□□□ -0.5
FN1-216ENST00000469569 NEUROD2Q15784 382 aa11.91□□□□□ -0.5
FN1-216ENST00000469569 DNAJC10Q8IXB1 793 aa11.91□□□□□ -0.5
FN1-216ENST00000469569 NLGN1Q8N2Q7 840 aa11.91□□□□□ -0.5
FN1-216ENST00000469569 FBXO22Q8NEZ5 403 aa11.91□□□□□ -0.5
FN1-216ENST00000469569 CICQ96RK0 1608 aaPredicted RBP11.9□□□□□ -0.5
FN1-216ENST00000469569 APAF1O14727 1248 aa11.9□□□□□ -0.5
FN1-216ENST00000469569 CCDC27Q2M243 656 aa11.9□□□□□ -0.5
FN1-216ENST00000469569 TSPYL4Q9UJ04 414 aa11.9□□□□□ -0.5
FN1-216ENST00000469569 VIRMAQ69YN4 1812 aaKnown RBP11.9□□□□□ -0.5
FN1-216ENST00000469569 KCPQ6ZWJ8 1503 aa11.9□□□□□ -0.5
FN1-216ENST00000469569 CASZ1Q86V15 1759 aa11.9□□□□□ -0.51
FN1-216ENST00000469569 ZPR1O75312 459 aa11.89□□□□□ -0.51
FN1-216ENST00000469569 PHF14O94880 888 aa11.89□□□□□ -0.51
FN1-216ENST00000469569 INTS5Q6P9B9 1019 aaKnown RBP11.89□□□□□ -0.51
FN1-216ENST00000469569 SIPA1L3O60292 1781 aaPredicted RBP11.89□□□□□ -0.51
FN1-216ENST00000469569 CHL1O00533 1208 aa11.88□□□□□ -0.51
FN1-216ENST00000469569 IL6STP40189 918 aaPredicted RBP11.88□□□□□ -0.51
FN1-216ENST00000469569 PTGER2P43116 358 aa11.88□□□□□ -0.51
FN1-216ENST00000469569 EIF4A1P60842 406 aaKnown RBP11.88□□□□□ -0.51
FN1-216ENST00000469569 GNAI1P63096 354 aa11.88□□□□□ -0.51
FN1-216ENST00000469569 IER5LQ5T953 404 aa11.88□□□□□ -0.51
FN1-216ENST00000469569 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
FN1-216ENST00000469569 ARXQ96QS3 562 aa11.88□□□□□ -0.51
FN1-216ENST00000469569 PDGFDQ9GZP0 370 aaPredicted RBP11.88□□□□□ -0.51
FN1-216ENST00000469569 RRP7AQ9Y3A4 280 aaKnown RBP11.88□□□□□ -0.51
FN1-216ENST00000469569 UBR2Q8IWV8 1755 aa11.87□□□□□ -0.51
FN1-216ENST00000469569 CCDC184Q52MB2 194 aa11.87□□□□□ -0.51
FN1-216ENST00000469569 DIEXFQ68CQ4 756 aaKnown RBP11.87□□□□□ -0.51
FN1-216ENST00000469569 MS4A4AQ96JQ5 239 aa11.87□□□□□ -0.51
FN1-216ENST00000469569 IFT57Q9NWB7 429 aa11.87□□□□□ -0.51
FN1-216ENST00000469569 DLG5Q8TDM6 1919 aa11.87□□□□□ -0.51
FN1-216ENST00000469569 SOS1Q07889 1333 aaPredicted RBP11.86□□□□□ -0.51
FN1-216ENST00000469569 ERBB4Q15303 1308 aa11.86□□□□□ -0.51
FN1-216ENST00000469569 COL5A3P25940 1745 aaPredicted RBP11.86□□□□□ -0.51
FN1-216ENST00000469569 KCNQ3O43525 872 aa11.86□□□□□ -0.51
FN1-216ENST00000469569 GIGYF1O75420 1035 aaPredicted RBP11.86□□□□□ -0.51
FN1-216ENST00000469569 HOXB7P09629 217 aa11.86□□□□□ -0.51
FN1-216ENST00000469569 EIF5P55010 431 aaKnown RBP11.86□□□□□ -0.51
FN1-216ENST00000469569 THUMPD2Q9BTF0 503 aaKnown RBP11.86□□□□□ -0.51
FN1-216ENST00000469569 UBR3Q6ZT12 1888 aa11.86□□□□□ -0.51
FN1-216ENST00000469569 IL16Q14005 1332 aa11.86□□□□□ -0.51
FN1-216ENST00000469569 CANXP27824 592 aaKnown RBP11.85□□□□□ -0.51
FN1-216ENST00000469569 IRX5P78411 483 aaPredicted RBP11.85□□□□□ -0.51
FN1-216ENST00000469569 FAM9BQ8IZU0 186 aa11.85□□□□□ -0.51
FN1-216ENST00000469569 SLC39A7Q92504 469 aa11.85□□□□□ -0.51
FN1-216ENST00000469569 MIS18AQ9NYP9 233 aa11.85□□□□□ -0.51
FN1-216ENST00000469569 NARFQ9UHQ1 456 aa11.85□□□□□ -0.51
FN1-216ENST00000469569 ZBTB1Q9Y2K1 713 aa11.85□□□□□ -0.51
FN1-216ENST00000469569 USP42Q9H9J4 1324 aaKnown RBP11.85□□□□□ -0.51
FN1-216ENST00000469569 COL15A1P39059 1388 aa11.84□□□□□ -0.51
FN1-216ENST00000469569 WDR63Q8IWG1 891 aa11.84□□□□□ -0.51
FN1-216ENST00000469569 LAS1LQ9Y4W2 734 aaKnown RBP11.84□□□□□ -0.51
FN1-216ENST00000469569 CD2APQ9Y5K6 639 aa11.84□□□□□ -0.51
FN1-216ENST00000469569 USP16Q9Y5T5 823 aa11.84□□□□□ -0.51
FN1-216ENST00000469569 TJP1Q07157 1748 aa11.83□□□□□ -0.52
FN1-216ENST00000469569 PPP1R37O75864 691 aa11.83□□□□□ -0.52
FN1-216ENST00000469569 ZNF853P0CG23 659 aa11.83□□□□□ -0.52
FN1-216ENST00000469569 C7P10643 843 aa11.83□□□□□ -0.52
FN1-216ENST00000469569 GYS1P13807 737 aa11.83□□□□□ -0.52
FN1-216ENST00000469569 PLCG2P16885 1265 aa11.83□□□□□ -0.52
FN1-216ENST00000469569 CLEC4GQ6UXB4 293 aa11.83□□□□□ -0.52
FN1-216ENST00000469569 WWC1Q8IX03 1113 aa11.83□□□□□ -0.52
FN1-216ENST00000469569 OCEL1Q9H607 264 aa11.83□□□□□ -0.52
FN1-216ENST00000469569 METRNQ9UJH8 293 aa11.83□□□□□ -0.52
FN1-216ENST00000469569 ZNF652Q9Y2D9 606 aa11.83□□□□□ -0.52
FN1-216ENST00000469569 PARP3Q9Y6F1 533 aa11.83□□□□□ -0.52
FN1-216ENST00000469569 MYH14Q7Z406 1995 aaKnown RBP11.83□□□□□ -0.52
FN1-216ENST00000469569 TUBGCP6Q96RT7 1819 aa11.82□□□□□ -0.52
FN1-216ENST00000469569 SEC24BO95487 1268 aa11.82□□□□□ -0.52
FN1-216ENST00000469569 A1BGP04217 495 aa11.82□□□□□ -0.52
FN1-216ENST00000469569 AMIGO3Q86WK7 504 aa11.82□□□□□ -0.52
FN1-216ENST00000469569 COL24A1Q17RW2 1714 aa11.81□□□□□ -0.52
FN1-216ENST00000469569 MMP10P09238 476 aa11.81□□□□□ -0.52
FN1-216ENST00000469569 MSL1Q68DK7 614 aa11.81□□□□□ -0.52
FN1-216ENST00000469569 PDCD7Q8N8D1 485 aaKnown RBP11.81□□□□□ -0.52
FN1-216ENST00000469569 COLQQ9Y215 455 aaPredicted RBP11.81□□□□□ -0.52
FN1-216ENST00000469569 KDM3BQ7LBC6 1761 aa11.8□□□□□ -0.52
FN1-216ENST00000469569 ERVV-1B6SEH8 477 aa11.8□□□□□ -0.52
FN1-216ENST00000469569 USPL1Q5W0Q7 1092 aa11.8□□□□□ -0.52
FN1-216ENST00000469569 DPY19L2Q6NUT2 758 aa11.8□□□□□ -0.52
FN1-216ENST00000469569 DZIP3Q86Y13 1208 aaKnown RBP11.8□□□□□ -0.52
FN1-216ENST00000469569 SYT17Q9BSW7 474 aa11.8□□□□□ -0.52
FN1-216ENST00000469569 FHDC1Q9C0D6 1143 aaPredicted RBP11.8□□□□□ -0.52
FN1-216ENST00000469569 TSHZ2Q9NRE2 1034 aa11.8□□□□□ -0.52
FN1-216ENST00000469569 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
FN1-216ENST00000469569 ZNF330Q9Y3S2 320 aaPredicted RBP11.8□□□□□ -0.52
FN1-216ENST00000469569 TM4SF1P30408 202 aa11.79□□□□□ -0.52
FN1-216ENST00000469569 KIF6Q6ZMV9 814 aa11.79□□□□□ -0.52
FN1-216ENST00000469569 MYH16Q9H6N6 1097 aa11.79□□□□□ -0.52
FN1-216ENST00000469569 PDZRN3Q9UPQ7 1066 aa11.79□□□□□ -0.52
FN1-216ENST00000469569 EIF2S2P20042 333 aaKnown RBP11.78□□□□□ -0.52
FN1-216ENST00000469569 TGFB2P61812 414 aa11.78□□□□□ -0.52
FN1-216ENST00000469569 DUSP27Q5VZP5 1158 aa11.78□□□□□ -0.52
FN1-216ENST00000469569 SMIM5Q71RC9 77 aa11.78□□□□□ -0.52
FN1-216ENST00000469569 SETDB2Q96T68 719 aa11.78□□□□□ -0.52
FN1-216ENST00000469569 DDX21Q9NR30 783 aaKnown RBP eCLIP11.78□□□□□ -0.52
FN1-216ENST00000469569 HYPKQ9NX55 129 aa11.78□□□□□ -0.52
FN1-216ENST00000469569 DBF4Q9UBU7 674 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms